RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 VTI1AQ96AJ9 217 aa7.74□□□□□ -1.17
CASC18-202ENST00000548557 ZNF277Q9NRM2 450 aaPredicted RBP7.74□□□□□ -1.17
CASC18-202ENST00000548557 DIAPH3Q9NSV4 1193 aa7.74□□□□□ -1.17
CASC18-202ENST00000548557 LRP2BPQ9P2M1 347 aa7.74□□□□□ -1.17
CASC18-202ENST00000548557 AKAP11Q9UKA4 1901 aa7.74□□□□□ -1.17
CASC18-202ENST00000548557 EPB41L2O43491 1005 aaKnown RBP7.73□□□□□ -1.17
CASC18-202ENST00000548557 MCM2P49736 904 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 CCDC181Q5TID7 509 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 TMX3Q96JJ7 454 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 DBNDD1Q9H9R9 158 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 PIH1D3Q9NQM4 214 aaKnown RBP7.73□□□□□ -1.17
CASC18-202ENST00000548557 ABCF2Q9UG63 623 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 SERPINA10Q9UK55 444 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 PALD1Q9ULE6 856 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 COL1A1P02452 1464 aaPredicted RBP7.73□□□□□ -1.17
CASC18-202ENST00000548557 FER1L6Q2WGJ9 1857 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 RNF113AO15541 343 aaKnown RBP7.73□□□□□ -1.17
CASC18-202ENST00000548557 ZMYND10O75800 440 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 IDH1O75874 414 aaKnown RBP7.73□□□□□ -1.17
CASC18-202ENST00000548557 ZNF445P59923 1031 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 GTF2IP78347 998 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 CHAF1AQ13111 956 aaPredicted RBP7.73□□□□□ -1.17
CASC18-202ENST00000548557 CUL4AQ13619 759 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 UBE3CQ15386 1083 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 SLC9C2Q5TAH2 1124 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 ARHGAP27Q6ZUM4 889 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 NIM1KQ8IY84 436 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 SREK1Q8WXA9 508 aaKnown RBP7.73□□□□□ -1.17
CASC18-202ENST00000548557 RAD50Q92878 1312 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 ZNRF3Q9ULT6 936 aa7.73□□□□□ -1.17
CASC18-202ENST00000548557 USP17L3A6NCW0 530 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 USP17L4A6NCW7 530 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 DHX16O60231 1041 aaKnown RBP7.72□□□□□ -1.17
CASC18-202ENST00000548557 GRIN3BO60391 1043 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 CALRP27797 417 aaKnown RBP7.72□□□□□ -1.17
CASC18-202ENST00000548557 ADD2P35612 726 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 MFSD14BQ5SR56 506 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 USP17L1Q7RTZ2 530 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 OTUD6BQ8N6M0 293 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 TSPAN18Q96SJ8 248 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 FAM117AQ9C073 453 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 ANO2Q9NQ90 1003 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 HELLSQ9NRZ9 838 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 MYO3BQ8WXR4 1341 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 HMGB1P1B2RPK0 211 aaPredicted RBP7.72□□□□□ -1.17
CASC18-202ENST00000548557 NRDCO43847 1150 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 LDHBP07195 334 aaKnown RBP7.72□□□□□ -1.17
CASC18-202ENST00000548557 LMNB1P20700 586 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 RHBDL3P58872 404 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 ZMYM1Q5SVZ6 1142 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 ZNF280DQ6N043 979 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 GET4Q7L5D6 327 aaPredicted RBP7.72□□□□□ -1.17
CASC18-202ENST00000548557 SLF2Q8IX21 1173 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 APPBP2Q92624 585 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 RAI14Q9P0K7 980 aa7.72□□□□□ -1.17
CASC18-202ENST00000548557 MAST3O60307 1309 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 PDE6AP16499 860 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 YBX3P16989 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
CASC18-202ENST00000548557 PRDX5P30044 214 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 GSTO1P78417 241 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 HSP90AA2PQ14568 343 aaPredicted RBP7.71□□□□□ -1.18
CASC18-202ENST00000548557 ZSCAN23Q3MJ62 389 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 MCMDC2Q4G0Z9 681 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 DACT2Q5SW24 774 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 WDR78Q5VTH9 848 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 CWC27Q6UX04 472 aaKnown RBP7.71□□□□□ -1.18
CASC18-202ENST00000548557 NSUN4Q96CB9 384 aaKnown RBP7.71□□□□□ -1.18
CASC18-202ENST00000548557 INTS4Q96HW7 963 aaKnown RBP7.71□□□□□ -1.18
CASC18-202ENST00000548557 PPP1R9BQ96SB3 815 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 MRIQ9BWK5 157 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 IL25Q9H293 177 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 TCRBV5S4A2TA0A5A2 114 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 YDJCA8MPS7 323 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 ESPNB1AK53 854 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 SGSM2O43147 1006 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 PRPF40AO75400 957 aaKnown RBP7.71□□□□□ -1.18
CASC18-202ENST00000548557 LDHCP07864 332 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 VIL1P09327 827 aaKnown RBP7.71□□□□□ -1.18
CASC18-202ENST00000548557 NASPP49321 788 aaPredicted RBP7.71□□□□□ -1.18
CASC18-202ENST00000548557 TNIP1Q15025 636 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 GPR162Q16538 588 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 CAVIN1Q6NZI2 390 aaKnown RBP7.71□□□□□ -1.18
CASC18-202ENST00000548557 DZIP1Q86YF9 867 aaKnown RBP7.71□□□□□ -1.18
CASC18-202ENST00000548557 MAGEB6Q8N7X4 407 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 CXorf38Q8TB03 319 aa7.71□□□□□ -1.18
CASC18-202ENST00000548557 FAM163AQ96GL9 167 aaPredicted RBP7.71□□□□□ -1.18
CASC18-202ENST00000548557 ZNF532Q9HCE3 1301 aa7.7□□□□□ -1.18
CASC18-202ENST00000548557 FZD9O00144 591 aa7.7□□□□□ -1.18
CASC18-202ENST00000548557 GTPBP6O43824 516 aaPredicted RBP7.7□□□□□ -1.18
CASC18-202ENST00000548557 HSPA4P34932 840 aa7.7□□□□□ -1.18
CASC18-202ENST00000548557 RASSF7Q02833 373 aa7.7□□□□□ -1.18
CASC18-202ENST00000548557 MECOMQ03112 1051 aa7.7□□□□□ -1.18
CASC18-202ENST00000548557 CCDC173Q0VFZ6 552 aa7.7□□□□□ -1.18
CASC18-202ENST00000548557 NMIQ13287 307 aaPredicted RBP7.7□□□□□ -1.18
CASC18-202ENST00000548557 NAA16Q6N069 864 aaPredicted RBP7.7□□□□□ -1.18
CASC18-202ENST00000548557 CREBRFQ8IUR6 639 aa7.7□□□□□ -1.18
CASC18-202ENST00000548557 GPT2Q8TD30 523 aa7.7□□□□□ -1.18
CASC18-202ENST00000548557 FAM227BQ96M60 508 aa7.7□□□□□ -1.18
CASC18-202ENST00000548557 MYH13Q9UKX3 1938 aa7.7□□□□□ -1.18
CASC18-202ENST00000548557 A0A0D9SFI3 127 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms