RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 VPS37DQ86XT2 251 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 ZKSCAN3Q9BRR0 538 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 TAOK2Q9UL54 1235 aa21.54■■□□□ 1.04
PRPF40B-208ENST00000548436 BTAF1O14981 1849 aa21.53■■□□□ 1.04
PRPF40B-208ENST00000548436 SLC10A5Q5PT55 438 aa21.53■■□□□ 1.04
PRPF40B-208ENST00000548436 PLA2G4DQ86XP0 818 aa21.53■■□□□ 1.04
PRPF40B-208ENST00000548436 C17orf53Q8N3J3 647 aaPredicted RBP21.53■■□□□ 1.04
PRPF40B-208ENST00000548436 SDR42E1Q8WUS8 393 aa21.53■■□□□ 1.04
PRPF40B-208ENST00000548436 ERCC4Q92889 916 aaPredicted RBP21.53■■□□□ 1.04
PRPF40B-208ENST00000548436 NGLY1Q96IV0 654 aa21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 TOMM22Q9NS69 142 aa21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 GNL3LQ9NVN8 582 aaKnown RBP21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 RAI14Q9P0K7 980 aa21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 MYH2Q9UKX2 1941 aa21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 MYH13Q9UKX3 1938 aa21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 TPM2P07951 284 aa21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 GTF2E1P29083 439 aaPredicted RBP21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 ZNF75DP51815 510 aa21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 AXDND1Q5T1B0 1012 aaPredicted RBP21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 FAM84BQ96KN1 310 aaPredicted RBP21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 TRIM5Q9C035 493 aa21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 SRP68Q9UHB9 627 aaKnown RBP21.52■■□□□ 1.04
PRPF40B-208ENST00000548436 NID2Q14112 1375 aa21.51■■□□□ 1.03
PRPF40B-208ENST00000548436 GOLGA6L6A8MZA4 724 aa21.51■■□□□ 1.03
PRPF40B-208ENST00000548436 TERF1P54274 439 aa21.51■■□□□ 1.03
PRPF40B-208ENST00000548436 PPARAQ07869 468 aa21.51■■□□□ 1.03
PRPF40B-208ENST00000548436 NOLC1Q14978 699 aaKnown RBP eCLIP21.51■■□□□ 1.03
PRPF40B-208ENST00000548436 COL24A1Q17RW2 1714 aa21.51■■□□□ 1.03
PRPF40B-208ENST00000548436 MAGEB6P1A0A0J9YX57 407 aa21.51■■□□□ 1.03
PRPF40B-208ENST00000548436 SMIM22K7EJ46 135 aa21.51■■□□□ 1.03
PRPF40B-208ENST00000548436 SLC26A6Q9BXS9 759 aa21.51■■□□□ 1.03
PRPF40B-208ENST00000548436 STK36Q9NRP7 1315 aa21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 WDHD1O75717 1129 aaPredicted RBP21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 TPM3P06753 285 aa21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 SSRP1Q08945 709 aaKnown RBP21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 WTAPQ15007 396 aa21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 SLC39A14Q15043 492 aa21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 CAVIN4Q5BKX8 364 aa21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 SDF4Q9BRK5 362 aa21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 RIOK1Q9BRS2 568 aaKnown RBP21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 NARFQ9UHQ1 456 aa21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 SPATA31A6Q5VVP1 1343 aa21.5■■□□□ 1.03
PRPF40B-208ENST00000548436 RGL2O15211 777 aa21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 FMNL1O95466 1100 aaPredicted RBP21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 U2AF2P26368 475 aaKnown RBP eCLIP21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 ZNF384Q8TF68 577 aa21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 ANO10Q9NW15 660 aa21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 PYCARDQ9ULZ3 195 aa21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 MYH6P13533 1939 aa21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 MINDY4BA8MYZ0 360 aa21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 RPS6KA4O75676 772 aa21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 IFNAR1P17181 557 aa21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 PTGS1P23219 599 aa21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 KLRK1P26718 216 aa21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 MARCKSP29966 332 aaPredicted RBP21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 SART3Q15020 963 aaKnown RBP21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 RC3H1Q5TC82 1133 aaKnown RBP21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 RNF41Q9H4P4 317 aaPredicted RBP21.49■■□□□ 1.03
PRPF40B-208ENST00000548436 GUCY1A2P33402 732 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 DYNLL1P63167 89 aaKnown RBP21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 DHX40Q8IX18 779 aaKnown RBP21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 SPTLC3Q9NUV7 552 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 ANAPC4Q9UJX5 808 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 MROH7-TTC4A0A0A0MT08 1334 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 GOLGA6L19H0YKK7 550 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 CMA1P23946 247 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 GNL2Q13823 731 aaKnown RBP21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 TRIM29Q14134 588 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 PTPAQ15257 358 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 RTN1Q16799 776 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 KIAA1524Q8TCG1 905 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 SETDB2Q96T68 719 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 MAP3K14Q99558 947 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 NRBP1Q9UHY1 535 aa21.48■■□□□ 1.03
PRPF40B-208ENST00000548436 ZNF202O95125 648 aa21.47■■□□□ 1.03
PRPF40B-208ENST00000548436 RPS8P62241 208 aaKnown RBP21.47■■□□□ 1.03
PRPF40B-208ENST00000548436 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.47■■□□□ 1.03
PRPF40B-208ENST00000548436 FBXO33Q7Z6M2 555 aa21.47■■□□□ 1.03
PRPF40B-208ENST00000548436 CCDC24Q8N4L8 307 aa21.47■■□□□ 1.03
PRPF40B-208ENST00000548436 MTA3Q9BTC8 594 aa21.47■■□□□ 1.03
PRPF40B-208ENST00000548436 NYXQ9GZU5 481 aa21.47■■□□□ 1.03
PRPF40B-208ENST00000548436 ERICH2A1L162 156 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 GNPATO15228 680 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 PFKFB1P16118 471 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 CCDC186Q7Z3E2 898 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 NBPF11Q86T75 865 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 AMIGO3Q86WK7 504 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 DRC7Q8IY82 874 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 KIAA1468Q9P260 1216 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 SARM1Q6SZW1 724 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 NBPF5PQ86XG9 351 aaPredicted RBP21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 CMTR1Q8N1G2 835 aaKnown RBP21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 TMTC2Q8N394 836 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 FBXW7Q969H0 707 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 NLRP3Q96P20 1036 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 TAF1LQ8IZX4 1826 aa21.46■■□□□ 1.03
PRPF40B-208ENST00000548436 NHSQ6T4R5 1651 aa21.45■■□□□ 1.03
PRPF40B-208ENST00000548436 PPP6R2O75170 966 aa21.45■■□□□ 1.02
PRPF40B-208ENST00000548436 FAM182BQ5T319 152 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms