RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 DDX4Q9NQI0 724 aaKnown RBP18.49■□□□□ 0.55
RNF41-205ENST00000548225 MKRN3Q13064 507 aaKnown RBP18.48■□□□□ 0.55
RNF41-205ENST00000548225 PICALMQ13492 652 aa18.48■□□□□ 0.55
RNF41-205ENST00000548225 COL13A1Q5TAT6 717 aaPredicted RBP18.48■□□□□ 0.55
RNF41-205ENST00000548225 ZSCAN29Q8IWY8 852 aaPredicted RBP18.48■□□□□ 0.55
RNF41-205ENST00000548225 ZFPM1Q8IX07 1006 aa18.48■□□□□ 0.55
RNF41-205ENST00000548225 TEX11Q8IYF3 940 aa18.48■□□□□ 0.55
RNF41-205ENST00000548225 ANTXR1Q9H6X2 564 aa18.48■□□□□ 0.55
RNF41-205ENST00000548225 ELP3Q9H9T3 547 aa18.48■□□□□ 0.55
RNF41-205ENST00000548225 RNF186Q9NXI6 227 aa18.48■□□□□ 0.55
RNF41-205ENST00000548225 AATFQ9NY61 560 aaKnown RBP eCLIP18.48■□□□□ 0.55
RNF41-205ENST00000548225 ZNF112Q9UJU3 913 aa18.48■□□□□ 0.55
RNF41-205ENST00000548225 NDUFB9Q9Y6M9 179 aa18.48■□□□□ 0.55
RNF41-205ENST00000548225 FOCADQ5VW36 1801 aa18.48■□□□□ 0.55
RNF41-205ENST00000548225 SMARCA5O60264 1052 aaPredicted RBP18.47■□□□□ 0.55
RNF41-205ENST00000548225 CYP7A1P22680 504 aa18.47■□□□□ 0.55
RNF41-205ENST00000548225 MIGA2Q7L4E1 593 aa18.47■□□□□ 0.55
RNF41-205ENST00000548225 ADGRA1Q86SQ6 560 aa18.47■□□□□ 0.55
RNF41-205ENST00000548225 MAGEB6Q8N7X4 407 aa18.47■□□□□ 0.55
RNF41-205ENST00000548225 SH3RF3Q8TEJ3 882 aaPredicted RBP18.47■□□□□ 0.55
RNF41-205ENST00000548225 OPTNQ96CV9 577 aa18.47■□□□□ 0.55
RNF41-205ENST00000548225 GPATCH3Q96I76 525 aa18.47■□□□□ 0.55
RNF41-205ENST00000548225 OSBPL5Q9H0X9 879 aaPredicted RBP18.47■□□□□ 0.55
RNF41-205ENST00000548225 BCL11AQ9H165 835 aa18.47■□□□□ 0.55
RNF41-205ENST00000548225 SPDYE5A6NIY4 337 aa18.46■□□□□ 0.55
RNF41-205ENST00000548225 ALDH1A1P00352 501 aa18.46■□□□□ 0.55
RNF41-205ENST00000548225 MAP3K10Q02779 954 aa18.46■□□□□ 0.55
RNF41-205ENST00000548225 HDAC1Q13547 482 aaPredicted RBP18.46■□□□□ 0.55
RNF41-205ENST00000548225 SH3BP5LQ7L8J4 393 aa18.46■□□□□ 0.55
RNF41-205ENST00000548225 ERO1BQ86YB8 467 aa18.46■□□□□ 0.55
RNF41-205ENST00000548225 DNAJC2Q99543 621 aaKnown RBP18.46■□□□□ 0.55
RNF41-205ENST00000548225 HAUS7Q99871 368 aa18.46■□□□□ 0.55
RNF41-205ENST00000548225 SNCAIPQ9Y6H5 919 aa18.46■□□□□ 0.55
RNF41-205ENST00000548225 DDTLA6NHG4 134 aaPredicted RBP18.45■□□□□ 0.54
RNF41-205ENST00000548225 GOLIM4O00461 696 aa18.45■□□□□ 0.54
RNF41-205ENST00000548225 TRPA1O75762 1119 aa18.45■□□□□ 0.54
RNF41-205ENST00000548225 GJA5P36382 358 aa18.45■□□□□ 0.54
RNF41-205ENST00000548225 NOL9Q5SY16 702 aaKnown RBP18.45■□□□□ 0.54
RNF41-205ENST00000548225 BOLA2Q9H3K6 86 aa18.45■□□□□ 0.54
RNF41-205ENST00000548225 ECHDC1Q9NTX5 307 aa18.45■□□□□ 0.54
RNF41-205ENST00000548225 PAG1Q9NWQ8 432 aa18.45■□□□□ 0.54
RNF41-205ENST00000548225 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.45■□□□□ 0.54
RNF41-205ENST00000548225 TSKSQ9UJT2 592 aa18.45■□□□□ 0.54
RNF41-205ENST00000548225 CDK5RAP2Q96SN8 1893 aa18.45■□□□□ 0.54
RNF41-205ENST00000548225 TBC1D12O60347 775 aa18.44■□□□□ 0.54
RNF41-205ENST00000548225 INPP5BP32019 993 aa18.44■□□□□ 0.54
RNF41-205ENST00000548225 ZKSCAN4Q969J2 545 aaPredicted RBP18.44■□□□□ 0.54
RNF41-205ENST00000548225 GCC1Q96CN9 775 aa18.44■□□□□ 0.54
RNF41-205ENST00000548225 CFHR5Q9BXR6 569 aa18.44■□□□□ 0.54
RNF41-205ENST00000548225 DHX36Q9H2U1 1008 aaKnown RBP18.44■□□□□ 0.54
RNF41-205ENST00000548225 TESPA1A2RU30 521 aaPredicted RBP18.43■□□□□ 0.54
RNF41-205ENST00000548225 PDE6AP16499 860 aa18.43■□□□□ 0.54
RNF41-205ENST00000548225 GTF2A2P52657 109 aa18.43■□□□□ 0.54
RNF41-205ENST00000548225 PPATQ06203 517 aa18.43■□□□□ 0.54
RNF41-205ENST00000548225 SLC9C2Q5TAH2 1124 aa18.43■□□□□ 0.54
RNF41-205ENST00000548225 OTUD7BQ6GQQ9 843 aa18.43■□□□□ 0.54
RNF41-205ENST00000548225 OTUD5Q96G74 571 aa18.43■□□□□ 0.54
RNF41-205ENST00000548225 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.43■□□□□ 0.54
RNF41-205ENST00000548225 SUPT16HQ9Y5B9 1047 aaKnown RBP18.43■□□□□ 0.54
RNF41-205ENST00000548225 FLT1P17948 1338 aa18.43■□□□□ 0.54
RNF41-205ENST00000548225 PHF20L1A8MW92 1017 aa18.42■□□□□ 0.54
RNF41-205ENST00000548225 PPIL2Q13356 520 aa18.42■□□□□ 0.54
RNF41-205ENST00000548225 NOM1Q5C9Z4 860 aaKnown RBP18.42■□□□□ 0.54
RNF41-205ENST00000548225 IFNL1Q8IU54 200 aa18.42■□□□□ 0.54
RNF41-205ENST00000548225 TNS4Q8IZW8 715 aa18.42■□□□□ 0.54
RNF41-205ENST00000548225 TGFBRAP1Q8WUH2 860 aa18.42■□□□□ 0.54
RNF41-205ENST00000548225 ZBTB47Q9UFB7 747 aaPredicted RBP18.42■□□□□ 0.54
RNF41-205ENST00000548225 SCYL3Q8IZE3 742 aa18.41■□□□□ 0.54
RNF41-205ENST00000548225 MIGA1Q8NAN2 632 aa18.41■□□□□ 0.54
RNF41-205ENST00000548225 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
RNF41-205ENST00000548225 MS4A4AQ96JQ5 239 aa18.41■□□□□ 0.54
RNF41-205ENST00000548225 PI4KBQ9UBF8 816 aa18.41■□□□□ 0.54
RNF41-205ENST00000548225 HERC5Q9UII4 1024 aaKnown RBP18.41■□□□□ 0.54
RNF41-205ENST00000548225 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
RNF41-205ENST00000548225 DOCK1Q14185 1865 aa18.41■□□□□ 0.54
RNF41-205ENST00000548225 MYH7P12883 1935 aa18.41■□□□□ 0.54
RNF41-205ENST00000548225 CTNND1O60716 968 aaKnown RBP18.4■□□□□ 0.54
RNF41-205ENST00000548225 DYNLL1P63167 89 aaKnown RBP18.4■□□□□ 0.54
RNF41-205ENST00000548225 SNAPC2Q13487 334 aa18.4■□□□□ 0.54
RNF41-205ENST00000548225 ZSCAN25Q6NSZ9 544 aa18.4■□□□□ 0.54
RNF41-205ENST00000548225 MAPKAPK5Q8IW41 473 aa18.4■□□□□ 0.54
RNF41-205ENST00000548225 EDC3Q96F86 508 aaKnown RBP18.4■□□□□ 0.54
RNF41-205ENST00000548225 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.4■□□□□ 0.54
RNF41-205ENST00000548225 PICK1Q9NRD5 415 aa18.4■□□□□ 0.54
RNF41-205ENST00000548225 ZNF532Q9HCE3 1301 aa18.4■□□□□ 0.54
RNF41-205ENST00000548225 MAGEB6P1A0A0J9YX57 407 aa18.39■□□□□ 0.53
RNF41-205ENST00000548225 TCRBV5S4A2TA0A5A2 114 aa18.39■□□□□ 0.53
RNF41-205ENST00000548225 IGF2BP3O00425 579 aaKnown RBP eCLIP18.39■□□□□ 0.53
RNF41-205ENST00000548225 ERC2O15083 957 aa18.39■□□□□ 0.53
RNF41-205ENST00000548225 CETPP11597 493 aa18.39■□□□□ 0.53
RNF41-205ENST00000548225 ADD2P35612 726 aa18.39■□□□□ 0.53
RNF41-205ENST00000548225 USP5P45974 858 aa18.39■□□□□ 0.53
RNF41-205ENST00000548225 RIOK1Q9BRS2 568 aaKnown RBP18.39■□□□□ 0.53
RNF41-205ENST00000548225 RWDD1Q9H446 243 aaPredicted RBP18.39■□□□□ 0.53
RNF41-205ENST00000548225 SIPA1L1O43166 1804 aa18.38■□□□□ 0.53
RNF41-205ENST00000548225 CCL15-CCL14A0A0B4J2E2 113 aa18.38■□□□□ 0.53
RNF41-205ENST00000548225 IRF6O14896 467 aa18.38■□□□□ 0.53
RNF41-205ENST00000548225 HLA-DOAP06340 250 aa18.38■□□□□ 0.53
RNF41-205ENST00000548225 UBE3CQ15386 1083 aa18.38■□□□□ 0.53
RNF41-205ENST00000548225 CCL15Q16663 113 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms