RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 MYH1P12882 1939 aa19.59■□□□□ 0.73
LIMS2-217ENST00000545738 ITGBL1O95965 494 aaPredicted RBP19.59■□□□□ 0.73
LIMS2-217ENST00000545738 LRRFIP1Q32MZ4 808 aaKnown RBP19.59■□□□□ 0.73
LIMS2-217ENST00000545738 DCPSQ96C86 337 aaKnown RBP19.59■□□□□ 0.73
LIMS2-217ENST00000545738 NOL10Q9BSC4 688 aaKnown RBP19.59■□□□□ 0.73
LIMS2-217ENST00000545738 DDTLA6NHG4 134 aaPredicted RBP19.58■□□□□ 0.72
LIMS2-217ENST00000545738 GSG1L2A8MUP6 293 aa19.58■□□□□ 0.72
LIMS2-217ENST00000545738 SLC4A8Q2Y0W8 1093 aa19.58■□□□□ 0.72
LIMS2-217ENST00000545738 FKBP1CQ5VVH2 108 aa19.58■□□□□ 0.72
LIMS2-217ENST00000545738 CHADLQ6NUI6 762 aa19.58■□□□□ 0.72
LIMS2-217ENST00000545738 DCP1AQ9NPI6 582 aaPredicted RBP19.58■□□□□ 0.72
LIMS2-217ENST00000545738 APOBEC3FQ8IUX4 373 aaKnown RBP19.57■□□□□ 0.72
LIMS2-217ENST00000545738 OSBPL5Q9H0X9 879 aaPredicted RBP19.57■□□□□ 0.72
LIMS2-217ENST00000545738 SLC4A4Q9Y6R1 1079 aa19.57■□□□□ 0.72
LIMS2-217ENST00000545738 CCDC171Q6TFL3 1326 aa19.57■□□□□ 0.72
LIMS2-217ENST00000545738 SGSM2O43147 1006 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 CDC45O75419 566 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 TOMM70O94826 608 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 PLCG2P16885 1265 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 FAM83AQ86UY5 434 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 FZD1Q9UP38 647 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 ATRNL1Q5VV63 1379 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 HIP1O00291 1037 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 SULF1Q8IWU6 871 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 FAM151AQ8WW52 585 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 CRNKL1Q9BZJ0 848 aaKnown RBP19.56■□□□□ 0.72
LIMS2-217ENST00000545738 TMOD2Q9NZR1 351 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 SAP30BPQ9UHR5 308 aaKnown RBP19.56■□□□□ 0.72
LIMS2-217ENST00000545738 PALD1Q9ULE6 856 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 PCNTO95613 3336 aa19.56■□□□□ 0.72
LIMS2-217ENST00000545738 CYP2D7A0A087X1C5 515 aa19.55■□□□□ 0.72
LIMS2-217ENST00000545738 NBPF12Q5TAG4 269 aaPredicted RBP19.55■□□□□ 0.72
LIMS2-217ENST00000545738 CDC37L1Q7L3B6 337 aa19.55■□□□□ 0.72
LIMS2-217ENST00000545738 ESYT1Q9BSJ8 1104 aa19.55■□□□□ 0.72
LIMS2-217ENST00000545738 ENTPD3O75355 529 aa19.54■□□□□ 0.72
LIMS2-217ENST00000545738 NPM3O75607 178 aaKnown RBP19.54■□□□□ 0.72
LIMS2-217ENST00000545738 CYP2D6P10635 497 aa19.54■□□□□ 0.72
LIMS2-217ENST00000545738 HSPD1P10809 573 aaKnown RBP19.54■□□□□ 0.72
LIMS2-217ENST00000545738 USP5P45974 858 aa19.54■□□□□ 0.72
LIMS2-217ENST00000545738 RBM46Q8TBY0 533 aaKnown RBP19.54■□□□□ 0.72
LIMS2-217ENST00000545738 CDCA5Q96FF9 252 aa19.54■□□□□ 0.72
LIMS2-217ENST00000545738 RPAP1Q9BWH6 1393 aaPredicted RBP19.54■□□□□ 0.72
LIMS2-217ENST00000545738 CEP350Q5VT06 3117 aa19.54■□□□□ 0.72
LIMS2-217ENST00000545738 PASKQ96RG2 1323 aa19.54■□□□□ 0.72
LIMS2-217ENST00000545738 PTH1RQ03431 593 aa19.54■□□□□ 0.72
LIMS2-217ENST00000545738 CERS3Q8IU89 383 aa19.54■□□□□ 0.72
LIMS2-217ENST00000545738 RAD50Q92878 1312 aa19.53■□□□□ 0.72
LIMS2-217ENST00000545738 PLCD1P51178 756 aa19.53■□□□□ 0.72
LIMS2-217ENST00000545738 TNFAIP1Q13829 316 aa19.53■□□□□ 0.72
LIMS2-217ENST00000545738 LAMB1P07942 1786 aa19.53■□□□□ 0.72
LIMS2-217ENST00000545738 COL2A1P02458 1487 aaPredicted RBP19.53■□□□□ 0.72
LIMS2-217ENST00000545738 FAM196BA6NMK8 535 aa19.52■□□□□ 0.72
LIMS2-217ENST00000545738 PATL2C9JE40 543 aaKnown RBP19.52■□□□□ 0.72
LIMS2-217ENST00000545738 IFNL3Q8IZI9 196 aa19.52■□□□□ 0.72
LIMS2-217ENST00000545738 SMC1BQ8NDV3 1235 aa19.52■□□□□ 0.72
LIMS2-217ENST00000545738 DNAJC18Q9H819 358 aa19.52■□□□□ 0.72
LIMS2-217ENST00000545738 ATP8A2Q9NTI2 1148 aa19.52■□□□□ 0.72
LIMS2-217ENST00000545738 PAPPA2Q9BXP8 1791 aa19.52■□□□□ 0.71
LIMS2-217ENST00000545738 TRPM7Q96QT4 1865 aa19.52■□□□□ 0.71
LIMS2-217ENST00000545738 CST9Q5W186 159 aa19.51■□□□□ 0.71
LIMS2-217ENST00000545738 CTR9Q6PD62 1173 aa19.51■□□□□ 0.71
LIMS2-217ENST00000545738 MCM9Q9NXL9 1143 aa19.51■□□□□ 0.71
LIMS2-217ENST00000545738 USP17L12C9JPN9 530 aa19.51■□□□□ 0.71
LIMS2-217ENST00000545738 USP17L21D6R901 530 aa19.51■□□□□ 0.71
LIMS2-217ENST00000545738 TNNI2P48788 182 aa19.51■□□□□ 0.71
LIMS2-217ENST00000545738 C8orf34Q49A92 452 aa19.51■□□□□ 0.71
LIMS2-217ENST00000545738 CSRNP1Q96S65 589 aa19.51■□□□□ 0.71
LIMS2-217ENST00000545738 PPP2R3BQ9Y5P8 575 aa19.51■□□□□ 0.71
LIMS2-217ENST00000545738 FGAP02671 866 aa19.5■□□□□ 0.71
LIMS2-217ENST00000545738 APPP05067 770 aa19.5■□□□□ 0.71
LIMS2-217ENST00000545738 GNAT2P19087 354 aa19.5■□□□□ 0.71
LIMS2-217ENST00000545738 MOB2Q70IA6 237 aa19.5■□□□□ 0.71
LIMS2-217ENST00000545738 MIGA2Q7L4E1 593 aa19.5■□□□□ 0.71
LIMS2-217ENST00000545738 LSG1Q9H089 658 aaKnown RBP19.5■□□□□ 0.71
LIMS2-217ENST00000545738 TACC3Q9Y6A5 838 aa19.5■□□□□ 0.71
LIMS2-217ENST00000545738 OTOFQ9HC10 1997 aa19.5■□□□□ 0.71
LIMS2-217ENST00000545738 ZSCAN29Q8IWY8 852 aaPredicted RBP19.49■□□□□ 0.71
LIMS2-217ENST00000545738 RUFY2Q8WXA3 655 aa19.49■□□□□ 0.71
LIMS2-217ENST00000545738 ZNF408Q9H9D4 720 aa19.49■□□□□ 0.71
LIMS2-217ENST00000545738 PRKG1Q13976 671 aa19.48■□□□□ 0.71
LIMS2-217ENST00000545738 NBPF3Q9H094 633 aa19.48■□□□□ 0.71
LIMS2-217ENST00000545738 LAMA4Q16363 1823 aa19.48■□□□□ 0.71
LIMS2-217ENST00000545738 SEC24BO95487 1268 aa19.48■□□□□ 0.71
LIMS2-217ENST00000545738 RRP1BQ14684 758 aaKnown RBP19.48■□□□□ 0.71
LIMS2-217ENST00000545738 C12orf60Q5U649 245 aa19.48■□□□□ 0.71
LIMS2-217ENST00000545738 GIMAP6Q6P9H5 292 aa19.48■□□□□ 0.71
LIMS2-217ENST00000545738 SLC44A5Q8NCS7 719 aa19.48■□□□□ 0.71
LIMS2-217ENST00000545738 DYNLL2Q96FJ2 89 aa19.48■□□□□ 0.71
LIMS2-217ENST00000545738 TAF6LQ9Y6J9 622 aa19.48■□□□□ 0.71
LIMS2-217ENST00000545738 TDO2P48775 406 aa19.47■□□□□ 0.71
LIMS2-217ENST00000545738 GABPAQ06546 454 aa19.47■□□□□ 0.71
LIMS2-217ENST00000545738 SHROOM1Q2M3G4 852 aaPredicted RBP19.47■□□□□ 0.71
LIMS2-217ENST00000545738 NKX2-3Q8TAU0 364 aa19.47■□□□□ 0.71
LIMS2-217ENST00000545738 DSCC1Q9BVC3 393 aa19.47■□□□□ 0.71
LIMS2-217ENST00000545738 CELF2O95319 508 aaKnown RBP19.46■□□□□ 0.71
LIMS2-217ENST00000545738 FSTL1Q12841 308 aa19.46■□□□□ 0.71
LIMS2-217ENST00000545738 ALX1Q15699 326 aa19.46■□□□□ 0.71
LIMS2-217ENST00000545738 METTL16Q86W50 562 aaKnown RBP19.46■□□□□ 0.71
LIMS2-217ENST00000545738 STK11IPQ8N1F8 1099 aa19.46■□□□□ 0.71
LIMS2-217ENST00000545738 NAPBQ9H115 298 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms