RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 USP17L8P0C7I0 530 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 YBX3P16989 372 aaKnown RBP eCLIP16.31■□□□□ 0.2
SCARB1-209ENST00000545305 MMP14P50281 582 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 CTDSPL2Q05D32 466 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 CFAP100Q494V2 611 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 AKNAD1Q5T1N1 836 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 CTR9Q6PD62 1173 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 MFSD6Q6ZSS7 791 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 MAPKAPK5Q8IW41 473 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 STAG1Q8WVM7 1258 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 TTC14Q96N46 770 aa16.31■□□□□ 0.2
SCARB1-209ENST00000545305 FLT1P17948 1338 aa16.3■□□□□ 0.2
SCARB1-209ENST00000545305 POLR3DP05423 398 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-209ENST00000545305 PCP11498 1178 aaKnown RBP16.3■□□□□ 0.2
SCARB1-209ENST00000545305 PRELPP51888 382 aa16.3■□□□□ 0.2
SCARB1-209ENST00000545305 FGD1P98174 961 aa16.3■□□□□ 0.2
SCARB1-209ENST00000545305 DLGAP5Q15398 846 aa16.3■□□□□ 0.2
SCARB1-209ENST00000545305 APOBEC3HQ6NTF7 200 aaKnown RBP16.3■□□□□ 0.2
SCARB1-209ENST00000545305 CDC42EP5Q6NZY7 148 aa16.3■□□□□ 0.2
SCARB1-209ENST00000545305 DHX32Q7L7V1 743 aaKnown RBP16.3■□□□□ 0.2
SCARB1-209ENST00000545305 KRT23Q9C075 422 aa16.3■□□□□ 0.2
SCARB1-209ENST00000545305 NBPF3Q9H094 633 aa16.3■□□□□ 0.2
SCARB1-209ENST00000545305 TOMM22Q9NS69 142 aa16.3■□□□□ 0.2
SCARB1-209ENST00000545305 TMOD2Q9NZR1 351 aa16.3■□□□□ 0.2
SCARB1-209ENST00000545305 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-209ENST00000545305 ECM29Q5VYK3 1845 aa16.3■□□□□ 0.2
SCARB1-209ENST00000545305 DDX60LQ5H9U9 1706 aaKnown RBP16.3■□□□□ 0.2
SCARB1-209ENST00000545305 WDR19Q8NEZ3 1342 aa16.29■□□□□ 0.2
SCARB1-209ENST00000545305 HSP90AA1P07900 732 aaKnown RBP16.29■□□□□ 0.2
SCARB1-209ENST00000545305 MCM5P33992 734 aa16.29■□□□□ 0.2
SCARB1-209ENST00000545305 AK2P54819 239 aa16.29■□□□□ 0.2
SCARB1-209ENST00000545305 PICALMQ13492 652 aa16.29■□□□□ 0.2
SCARB1-209ENST00000545305 GPR162Q16538 588 aa16.29■□□□□ 0.2
SCARB1-209ENST00000545305 NOL8Q76FK4 1167 aaKnown RBP16.29■□□□□ 0.2
SCARB1-209ENST00000545305 MKRN1Q9UHC7 482 aaKnown RBP16.29■□□□□ 0.2
SCARB1-209ENST00000545305 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
SCARB1-209ENST00000545305 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
SCARB1-209ENST00000545305 NEDD4P46934 1319 aa16.28■□□□□ 0.2
SCARB1-209ENST00000545305 ZNF541Q9H0D2 1346 aa16.28■□□□□ 0.2
SCARB1-209ENST00000545305 SLC4A3P48751 1232 aa16.28■□□□□ 0.2
SCARB1-209ENST00000545305 MB21D2Q8IYB1 491 aaPredicted RBP16.28■□□□□ 0.2
SCARB1-209ENST00000545305 ALDH8A1Q9H2A2 487 aaPredicted RBP16.28■□□□□ 0.2
SCARB1-209ENST00000545305 RNF181Q9P0P0 153 aa16.28■□□□□ 0.2
SCARB1-209ENST00000545305 SBF1O95248 1867 aa16.28■□□□□ 0.2
SCARB1-209ENST00000545305 MYH1P12882 1939 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 ROBO3Q96MS0 1386 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 CYP2D7A0A087X1C5 515 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 SPDYE2BA6NHP3 402 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 B4E1Z4 1266 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 PRC1O43663 620 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 WDHD1O75717 1129 aaPredicted RBP16.27■□□□□ 0.2
SCARB1-209ENST00000545305 SPDYE6P0CI01 402 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 CYP2D6P10635 497 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 GMPSP49915 693 aaPredicted RBP16.27■□□□□ 0.2
SCARB1-209ENST00000545305 PDE4BQ07343 736 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 RRP12Q5JTH9 1297 aaKnown RBP16.27■□□□□ 0.2
SCARB1-209ENST00000545305 C12orf60Q5U649 245 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 STK11IPQ8N1F8 1099 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.2
SCARB1-209ENST00000545305 TCEANC2Q96MN5 208 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 LIMCH1Q9UPQ0 1083 aa16.27■□□□□ 0.2
SCARB1-209ENST00000545305 MYO1BO43795 1136 aa16.26■□□□□ 0.19
SCARB1-209ENST00000545305 GRIN3BO60391 1043 aa16.26■□□□□ 0.19
SCARB1-209ENST00000545305 NT5C2P49902 561 aa16.26■□□□□ 0.19
SCARB1-209ENST00000545305 EXOSC10Q01780 885 aaKnown RBP16.26■□□□□ 0.19
SCARB1-209ENST00000545305 Q6ZUG5 572 aa16.26■□□□□ 0.19
SCARB1-209ENST00000545305 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
SCARB1-209ENST00000545305 MTMR14Q8NCE2 650 aa16.26■□□□□ 0.19
SCARB1-209ENST00000545305 ESR2Q92731 530 aa16.26■□□□□ 0.19
SCARB1-209ENST00000545305 DPF2Q92785 391 aa16.26■□□□□ 0.19
SCARB1-209ENST00000545305 TDRD3Q9H7E2 651 aaKnown RBP16.26■□□□□ 0.19
SCARB1-209ENST00000545305 ZNF287Q9HBT7 754 aa16.26■□□□□ 0.19
SCARB1-209ENST00000545305 PCDHAC2Q9Y5I4 1007 aa16.26■□□□□ 0.19
SCARB1-209ENST00000545305 ORC4O43929 436 aa16.25■□□□□ 0.19
SCARB1-209ENST00000545305 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
SCARB1-209ENST00000545305 HLA-DOAP06340 250 aa16.25■□□□□ 0.19
SCARB1-209ENST00000545305 ZNF280AP59817 542 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-209ENST00000545305 SART3Q15020 963 aaKnown RBP16.25■□□□□ 0.19
SCARB1-209ENST00000545305 SLC4A8Q2Y0W8 1093 aa16.25■□□□□ 0.19
SCARB1-209ENST00000545305 GPC2Q8N158 579 aa16.25■□□□□ 0.19
SCARB1-209ENST00000545305 TMX3Q96JJ7 454 aa16.25■□□□□ 0.19
SCARB1-209ENST00000545305 IDI2Q9BXS1 227 aa16.25■□□□□ 0.19
SCARB1-209ENST00000545305 OSBPL5Q9H0X9 879 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-209ENST00000545305 MYOZ2Q9NPC6 264 aa16.25■□□□□ 0.19
SCARB1-209ENST00000545305 DDX4Q9NQI0 724 aaKnown RBP16.25■□□□□ 0.19
SCARB1-209ENST00000545305 SH2B1Q9NRF2 756 aaPredicted RBP16.25■□□□□ 0.19
SCARB1-209ENST00000545305 KDM4AO75164 1064 aa16.24■□□□□ 0.19
SCARB1-209ENST00000545305 COL9A3Q14050 684 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-209ENST00000545305 TOB2Q14106 344 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-209ENST00000545305 C9orf131Q5VYM1 1079 aa16.24■□□□□ 0.19
SCARB1-209ENST00000545305 MICALL2Q8IY33 904 aa16.24■□□□□ 0.19
SCARB1-209ENST00000545305 BRF1Q92994 677 aa16.24■□□□□ 0.19
SCARB1-209ENST00000545305 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
SCARB1-209ENST00000545305 PRMT6Q96LA8 375 aaPredicted RBP16.24■□□□□ 0.19
SCARB1-209ENST00000545305 LRRC2Q9BYS8 371 aa16.24■□□□□ 0.19
SCARB1-209ENST00000545305 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
SCARB1-209ENST00000545305 ERICH2A1L162 156 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 H7C1D1 291 aa16.23■□□□□ 0.19
SCARB1-209ENST00000545305 RANBP6O60518 1105 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms