RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 TEX11Q8IYF3 940 aa16.14■□□□□ 0.17
DDX55-213ENST00000545042 PCDHB15Q9Y5E8 787 aa16.14■□□□□ 0.17
DDX55-213ENST00000545042 CYP7A1P22680 504 aa16.13■□□□□ 0.17
DDX55-213ENST00000545042 CERS3Q8IU89 383 aa16.13■□□□□ 0.17
DDX55-213ENST00000545042 ZFPM1Q8IX07 1006 aa16.13■□□□□ 0.17
DDX55-213ENST00000545042 OPTNQ96CV9 577 aa16.13■□□□□ 0.17
DDX55-213ENST00000545042 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
DDX55-213ENST00000545042 AATFQ9NY61 560 aaKnown RBP eCLIP16.13■□□□□ 0.17
DDX55-213ENST00000545042 NDUFB9Q9Y6M9 179 aa16.13■□□□□ 0.17
DDX55-213ENST00000545042 RFX7Q2KHR2 1363 aa16.13■□□□□ 0.17
DDX55-213ENST00000545042 SMARCA5O60264 1052 aaPredicted RBP16.12■□□□□ 0.17
DDX55-213ENST00000545042 ATP5JP18859 108 aa16.12■□□□□ 0.17
DDX55-213ENST00000545042 PPP4CP60510 307 aa16.12■□□□□ 0.17
DDX55-213ENST00000545042 TNS4Q8IZW8 715 aa16.12■□□□□ 0.17
DDX55-213ENST00000545042 MAGEB6Q8N7X4 407 aa16.12■□□□□ 0.17
DDX55-213ENST00000545042 SH3RF3Q8TEJ3 882 aaPredicted RBP16.12■□□□□ 0.17
DDX55-213ENST00000545042 GPATCH3Q96I76 525 aa16.12■□□□□ 0.17
DDX55-213ENST00000545042 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
DDX55-213ENST00000545042 DDX4Q9NQI0 724 aaKnown RBP16.12■□□□□ 0.17
DDX55-213ENST00000545042 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
DDX55-213ENST00000545042 GOLIM4O00461 696 aa16.11■□□□□ 0.17
DDX55-213ENST00000545042 ALDH1A1P00352 501 aa16.11■□□□□ 0.17
DDX55-213ENST00000545042 OTUD7BQ6GQQ9 843 aa16.11■□□□□ 0.17
DDX55-213ENST00000545042 ERO1BQ86YB8 467 aa16.11■□□□□ 0.17
DDX55-213ENST00000545042 ZKSCAN4Q969J2 545 aaPredicted RBP16.11■□□□□ 0.17
DDX55-213ENST00000545042 BOLA2Q9H3K6 86 aa16.11■□□□□ 0.17
DDX55-213ENST00000545042 OTOFQ9HC10 1997 aa16.11■□□□□ 0.17
DDX55-213ENST00000545042 DDTLA6NHG4 134 aaPredicted RBP16.1■□□□□ 0.17
DDX55-213ENST00000545042 ADGRA1Q86SQ6 560 aa16.1■□□□□ 0.17
DDX55-213ENST00000545042 OTUD5Q96G74 571 aa16.1■□□□□ 0.17
DDX55-213ENST00000545042 OSBPL5Q9H0X9 879 aaPredicted RBP16.1■□□□□ 0.17
DDX55-213ENST00000545042 ZNF112Q9UJU3 913 aa16.1■□□□□ 0.17
DDX55-213ENST00000545042 SPDYE5A6NIY4 337 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 INPP5BP32019 993 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 GJA5P36382 358 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 GTF2A2P52657 109 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 SH3BP5LQ7L8J4 393 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 IFNL1Q8IU54 200 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 TGFBRAP1Q8WUH2 860 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 HAUS7Q99871 368 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.09■□□□□ 0.17
DDX55-213ENST00000545042 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 SNCAIPQ9Y6H5 919 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 MYO5AQ9Y4I1 1855 aaKnown RBP16.09■□□□□ 0.17
DDX55-213ENST00000545042 ATRNL1Q5VV63 1379 aa16.09■□□□□ 0.17
DDX55-213ENST00000545042 COL2A1P02458 1487 aaPredicted RBP16.09■□□□□ 0.17
DDX55-213ENST00000545042 DOCK2Q92608 1830 aa16.08■□□□□ 0.17
DDX55-213ENST00000545042 PPATQ06203 517 aa16.08■□□□□ 0.16
DDX55-213ENST00000545042 SLC9C2Q5TAH2 1124 aa16.08■□□□□ 0.16
DDX55-213ENST00000545042 MIGA1Q8NAN2 632 aa16.08■□□□□ 0.16
DDX55-213ENST00000545042 CNKSR2Q8WXI2 1034 aa16.08■□□□□ 0.16
DDX55-213ENST00000545042 DHX36Q9H2U1 1008 aaKnown RBP16.08■□□□□ 0.16
DDX55-213ENST00000545042 PICK1Q9NRD5 415 aa16.08■□□□□ 0.16
DDX55-213ENST00000545042 TBC1D12O60347 775 aa16.07■□□□□ 0.16
DDX55-213ENST00000545042 PDE6AP16499 860 aa16.07■□□□□ 0.16
DDX55-213ENST00000545042 USP5P45974 858 aa16.07■□□□□ 0.16
DDX55-213ENST00000545042 DYNLL1P63167 89 aaKnown RBP16.07■□□□□ 0.16
DDX55-213ENST00000545042 MAP3K10Q02779 954 aa16.07■□□□□ 0.16
DDX55-213ENST00000545042 PPIL2Q13356 520 aa16.07■□□□□ 0.16
DDX55-213ENST00000545042 SNAPC2Q13487 334 aa16.07■□□□□ 0.16
DDX55-213ENST00000545042 NOL9Q5SY16 702 aaKnown RBP16.07■□□□□ 0.16
DDX55-213ENST00000545042 MAPKAPK5Q8IW41 473 aa16.07■□□□□ 0.16
DDX55-213ENST00000545042 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.07■□□□□ 0.16
DDX55-213ENST00000545042 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
DDX55-213ENST00000545042 FLT1P17948 1338 aa16.06■□□□□ 0.16
DDX55-213ENST00000545042 CCL15-CCL14A0A0B4J2E2 113 aa16.06■□□□□ 0.16
DDX55-213ENST00000545042 MAGEB6P1A0A0J9YX57 407 aa16.06■□□□□ 0.16
DDX55-213ENST00000545042 TESPA1A2RU30 521 aaPredicted RBP16.06■□□□□ 0.16
DDX55-213ENST00000545042 TBC1D8O95759 1140 aa16.06■□□□□ 0.16
DDX55-213ENST00000545042 CETPP11597 493 aa16.06■□□□□ 0.16
DDX55-213ENST00000545042 HDAC1Q13547 482 aaPredicted RBP16.06■□□□□ 0.16
DDX55-213ENST00000545042 CCL15Q16663 113 aa16.06■□□□□ 0.16
DDX55-213ENST00000545042 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
DDX55-213ENST00000545042 EDC3Q96F86 508 aaKnown RBP16.06■□□□□ 0.16
DDX55-213ENST00000545042 TRIM34Q9BYJ4 488 aa16.06■□□□□ 0.16
DDX55-213ENST00000545042 PI4KBQ9UBF8 816 aa16.06■□□□□ 0.16
DDX55-213ENST00000545042 ZNF532Q9HCE3 1301 aa16.05■□□□□ 0.16
DDX55-213ENST00000545042 PHF20L1A8MW92 1017 aa16.05■□□□□ 0.16
DDX55-213ENST00000545042 IRF6O14896 467 aa16.05■□□□□ 0.16
DDX55-213ENST00000545042 CTNND1O60716 968 aaKnown RBP16.05■□□□□ 0.16
DDX55-213ENST00000545042 HLA-DOAP06340 250 aa16.05■□□□□ 0.16
DDX55-213ENST00000545042 ZSCAN25Q6NSZ9 544 aa16.05■□□□□ 0.16
DDX55-213ENST00000545042 SCYL3Q8IZE3 742 aa16.05■□□□□ 0.16
DDX55-213ENST00000545042 MS4A4AQ96JQ5 239 aa16.05■□□□□ 0.16
DDX55-213ENST00000545042 CFHR5Q9BXR6 569 aa16.05■□□□□ 0.16
DDX55-213ENST00000545042 RWDD1Q9H446 243 aaPredicted RBP16.05■□□□□ 0.16
DDX55-213ENST00000545042 HERC5Q9UII4 1024 aaKnown RBP16.05■□□□□ 0.16
DDX55-213ENST00000545042 IGF2BP3O00425 579 aaKnown RBP eCLIP16.04■□□□□ 0.16
DDX55-213ENST00000545042 ERC2O15083 957 aa16.04■□□□□ 0.16
DDX55-213ENST00000545042 IFFO2Q5TF58 517 aa16.04■□□□□ 0.16
DDX55-213ENST00000545042 ANKRD45Q5TZF3 282 aa16.04■□□□□ 0.16
DDX55-213ENST00000545042 CRACR2BQ8N4Y2 399 aaPredicted RBP16.04■□□□□ 0.16
DDX55-213ENST00000545042 CRNKL1Q9BZJ0 848 aaKnown RBP16.04■□□□□ 0.16
DDX55-213ENST00000545042 SAP30BPQ9UHR5 308 aaKnown RBP16.04■□□□□ 0.16
DDX55-213ENST00000545042 LAMB1P07942 1786 aa16.04■□□□□ 0.16
DDX55-213ENST00000545042 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
DDX55-213ENST00000545042 ADD2P35612 726 aa16.03■□□□□ 0.16
DDX55-213ENST00000545042 NOM1Q5C9Z4 860 aaKnown RBP16.03■□□□□ 0.16
DDX55-213ENST00000545042 FOXP4Q8IVH2 680 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms