RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CTR9Q6PD62 1173 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 PODNQ7Z5L7 613 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 SMARCC2Q8TAQ2 1214 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 PSME4Q14997 1843 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 STX6O43752 255 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 PDCP20941 246 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 FKBP1AP62942 108 aaKnown RBP10.97□□□□□ -0.65
GNE-206ENST00000543356 NKX2-3Q8TAU0 364 aa10.97□□□□□ -0.65
GNE-206ENST00000543356 MKRN1Q9UHC7 482 aaKnown RBP10.97□□□□□ -0.65
GNE-206ENST00000543356 ROBO3Q96MS0 1386 aa10.96□□□□□ -0.65
GNE-206ENST00000543356 MINDY4BA8MYZ0 360 aa10.96□□□□□ -0.65
GNE-206ENST00000543356 ZSCAN22P10073 491 aaPredicted RBP10.96□□□□□ -0.65
GNE-206ENST00000543356 PLCG2P16885 1265 aa10.96□□□□□ -0.65
GNE-206ENST00000543356 NT5C2P49902 561 aa10.96□□□□□ -0.65
GNE-206ENST00000543356 DOK7Q18PE1 504 aa10.96□□□□□ -0.65
GNE-206ENST00000543356 TTLL6Q8N841 843 aa10.96□□□□□ -0.65
GNE-206ENST00000543356 SH3RF3Q8TEJ3 882 aaPredicted RBP10.96□□□□□ -0.65
GNE-206ENST00000543356 MTFR1LQ9H019 292 aa10.96□□□□□ -0.65
GNE-206ENST00000543356 GPHNQ9NQX3 736 aaPredicted RBP10.96□□□□□ -0.65
GNE-206ENST00000543356 BRCA1P38398 1863 aaKnown RBP10.96□□□□□ -0.65
GNE-206ENST00000543356 NID2Q14112 1375 aa10.96□□□□□ -0.65
GNE-206ENST00000543356 KLF18A0A0U1RQI7 1052 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 G3V3G9 751 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 GOLGA6L22H0YM25 854 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 KDM4AO75164 1064 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 LIFRP42702 1097 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 BTDP43251 543 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 DCAF8Q5TAQ9 597 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 SGMS1Q86VZ5 419 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 IGDCC4Q8TDY8 1250 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 LY9Q9HBG7 655 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 RRAGDQ9NQL2 400 aaPredicted RBP10.96□□□□□ -0.66
GNE-206ENST00000543356 ZSWIM5Q9P217 1185 aa10.96□□□□□ -0.66
GNE-206ENST00000543356 GOLGA8BA8MQT2 603 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 USP17L12C9JPN9 530 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 USP17L21D6R901 530 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 ORC4O43929 436 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 SLC3A2P08195 630 aaKnown RBP10.95□□□□□ -0.66
GNE-206ENST00000543356 HMGN5P82970 282 aaKnown RBP10.95□□□□□ -0.66
GNE-206ENST00000543356 KIAA2012Q0VF49 1180 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 CCDC93Q567U6 631 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 NSUN7Q8NE18 718 aaKnown RBP10.95□□□□□ -0.66
GNE-206ENST00000543356 ESR2Q92731 530 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 INCENPQ9NQS7 918 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.95□□□□□ -0.66
GNE-206ENST00000543356 DPEP1P16444 411 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 KCNA3P22001 575 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 POLD1P28340 1107 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 USP5P45974 858 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 TGFB2P61812 414 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 SART3Q15020 963 aaKnown RBP10.95□□□□□ -0.66
GNE-206ENST00000543356 TMEM67Q5HYA8 995 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 CERS5Q8N5B7 392 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 PRDM4Q9UKN5 801 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 MTMR6Q9Y217 621 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 ADAMTSL1Q8N6G6 1762 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 ECM29Q5VYK3 1845 aa10.95□□□□□ -0.66
GNE-206ENST00000543356 SCN9AQ15858 1988 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 CYP2D7A0A087X1C5 515 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 DHX16O60231 1041 aaKnown RBP10.94□□□□□ -0.66
GNE-206ENST00000543356 ECE2O60344 883 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 CTDNEP1O95476 244 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 STRIP1Q5VSL9 837 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 RTKN2Q8IZC4 609 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 PSMD1Q99460 953 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 ZNF219Q9P2Y4 722 aaPredicted RBP10.94□□□□□ -0.66
GNE-206ENST00000543356 DAGLAQ9Y4D2 1042 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 PTPDC1A2A3K4 754 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 IFIT3O14879 490 aaKnown RBP10.94□□□□□ -0.66
GNE-206ENST00000543356 JAK2O60674 1132 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 ZBTB7AO95365 584 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 F13A1P00488 732 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 CCT2P78371 535 aaKnown RBP10.94□□□□□ -0.66
GNE-206ENST00000543356 RRP12Q5JTH9 1297 aaKnown RBP10.94□□□□□ -0.66
GNE-206ENST00000543356 LARP1BQ659C4 914 aaKnown RBP10.94□□□□□ -0.66
GNE-206ENST00000543356 FBXW7Q969H0 707 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 DBNDD1Q9H9R9 158 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 TOMM22Q9NS69 142 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 NAP1L2Q9ULW6 460 aaPredicted RBP10.94□□□□□ -0.66
GNE-206ENST00000543356 KIF3AQ9Y496 699 aa10.94□□□□□ -0.66
GNE-206ENST00000543356 C21orf2O43822 256 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 RCAN1P53805 252 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 RHBDL3P58872 404 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 SOGA3Q5TF21 947 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 C12orf60Q5U649 245 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 APOA5Q6Q788 366 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 AMOTL1Q8IY63 956 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 TEX11Q8IYF3 940 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 NCOA5Q9HCD5 579 aaKnown RBP10.93□□□□□ -0.66
GNE-206ENST00000543356 MCM9Q9NXL9 1143 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 ERICH2A1L162 156 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 AOC3Q16853 763 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 DACT2Q5SW24 774 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 FOXD4L5Q5VV16 416 aaPredicted RBP10.93□□□□□ -0.66
GNE-206ENST00000543356 HHIPL2Q6UWX4 724 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 TMTC2Q8N394 836 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 FOXD4L4Q8WXT5 416 aaPredicted RBP10.93□□□□□ -0.66
GNE-206ENST00000543356 VPS33BQ9H267 617 aa10.93□□□□□ -0.66
GNE-206ENST00000543356 TTF2Q9UNY4 1162 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms