RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CLIP2Q9UDT6 1046 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 PCDHA7Q9UN72 937 aa6.06□□□□□ -1.44
ATPAF1-212ENST00000542495 CDHR2Q9BYE9 1310 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 AKAP11Q9UKA4 1901 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 GOLGA6L19H0YKK7 550 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 PRC1O43663 620 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 DHX16O60231 1041 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 IL2RBP14784 551 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 CEBPZQ03701 1054 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 CHAF1AQ13111 956 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 TTC39AQ5SRH9 613 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 CHST3Q7LGC8 479 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 BRAPQ7Z569 592 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 LRRC8AQ8IWT6 810 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 FSIP1Q8NA03 581 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 ZBTB38Q8NAP3 1195 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 KCNG4Q8TDN1 519 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 PTCD2Q8WV60 388 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 MRPS27Q92552 414 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 FAM217BQ9NTX9 383 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 SERPINA10Q9UK55 444 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 RIPOR2Q9Y4F9 1068 aa6.05□□□□□ -1.44
ATPAF1-212ENST00000542495 LRP5O75197 1615 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 COL22A1Q8NFW1 1626 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 SMTNL1A8MU46 457 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 RAD21O60216 631 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 ZAP70P43403 619 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 ME1P48163 572 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 GUCY1B3Q02153 619 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 FKBP4Q02790 459 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 AXDND1Q5T1B0 1012 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 MYSM1Q5VVJ2 828 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 TOM1L2Q6ZVM7 507 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 DRC7Q8IY82 874 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 SMAP1Q8IYB5 467 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 CEP57L1Q8IYX8 460 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 VGLL2Q8N8G2 317 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 NCOA7Q8NI08 942 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 CCDC97Q96F63 343 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 TEX13AQ9BXU3 409 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 NBPF3Q9H094 633 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 PUS7LQ9H0K6 701 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 OSBPL5Q9H0X9 879 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 PRDM11Q9NQV5 511 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 PAXBP1Q9Y5B6 917 aa6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-212ENST00000542495 MAP3K15Q6ZN16 1313 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 KLF18A0A0U1RQI7 1052 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 FAM237AA0A1B0GTK4 181 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 SPDYE5A6NIY4 337 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 GOLGA8BA8MQT2 603 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 GPAA1O43292 621 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ADD2P35612 726 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 NDUFA8P51970 172 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 FOSBP53539 338 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 CCZ1BP86790 482 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 CCZ1P86791 482 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 KIF23Q02241 960 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 IFIT5Q13325 482 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 WASHC4Q2M389 1173 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 NYAP1Q6ZVC0 841 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 C8orf76Q96K31 380 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 NAT10Q9H0A0 1025 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 KIAA1468Q9P260 1216 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 IMPACTQ9P2X3 320 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ORC3Q9UBD5 711 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 CLIC4Q9Y696 253 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ANKRD36CQ5JPF3 1778 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ARAP2Q8WZ64 1704 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ZMYM6O95789 1325 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 A0A1B0GVL5 298 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 BECN2A8MW95 431 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 KIF28PB7ZC32 967 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 SH2B2O14492 632 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ZNF213O14771 459 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 SPTLC2O15270 562 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 MAP3K7O43318 606 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 TNNT1P13805 278 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 CMA1P23946 247 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 MCAMP43121 646 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 HAND2P61296 217 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 NCBP1Q09161 790 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ARID5BQ14865 1188 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 SLC39A14Q15043 492 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 STK38Q15208 465 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 UBE3CQ15386 1083 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ALX1Q15699 326 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ATP2B3Q16720 1220 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 TSR1Q2NL82 804 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 GORABQ5T7V8 394 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 ANO1Q5XXA6 986 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 OTUD7BQ6GQQ9 843 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 KIF6Q6ZMV9 814 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 NBPF11Q86T75 865 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 METTL3Q86U44 580 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 NLRP10Q86W26 655 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 CCDC125Q86Z20 511 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 AOPEPQ8N6M6 819 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 TTLL11Q8NHH1 800 aa6.03□□□□□ -1.44
ATPAF1-212ENST00000542495 NLRP7Q8WX94 980 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms