RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 FEZ1Q99689 392 aa14.49□□□□□ -0.09
RNF4-222ENST00000541204 ZKSCAN3Q9BRR0 538 aa14.49□□□□□ -0.09
RNF4-222ENST00000541204 KIAA1468Q9P260 1216 aa14.49□□□□□ -0.09
RNF4-222ENST00000541204 NRAPQ86VF7 1730 aa14.49□□□□□ -0.09
RNF4-222ENST00000541204 ANKRD18AQ8IVF6 992 aa14.49□□□□□ -0.09
RNF4-222ENST00000541204 CCAR2Q8N163 923 aaKnown RBP14.49□□□□□ -0.09
RNF4-222ENST00000541204 CDC5LQ99459 802 aaKnown RBP14.49□□□□□ -0.09
RNF4-222ENST00000541204 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.49□□□□□ -0.09
RNF4-222ENST00000541204 SLC4A4Q9Y6R1 1079 aa14.49□□□□□ -0.09
RNF4-222ENST00000541204 V9GYY5 206 aaPredicted RBP14.49□□□□□ -0.09
RNF4-222ENST00000541204 COL4A1P02462 1669 aa14.49□□□□□ -0.09
RNF4-222ENST00000541204 A0A1W2PQ27 194 aa14.48□□□□□ -0.09
RNF4-222ENST00000541204 A0A1W2PQ64 194 aa14.48□□□□□ -0.09
RNF4-222ENST00000541204 A0A1W2PQD8 194 aa14.48□□□□□ -0.09
RNF4-222ENST00000541204 BIN1O00499 593 aa14.48□□□□□ -0.09
RNF4-222ENST00000541204 GNPATO15228 680 aa14.48□□□□□ -0.09
RNF4-222ENST00000541204 TDO2P48775 406 aa14.48□□□□□ -0.09
RNF4-222ENST00000541204 EVCP57679 992 aa14.48□□□□□ -0.09
RNF4-222ENST00000541204 ZRSR1Q15695 479 aaKnown RBP14.48□□□□□ -0.09
RNF4-222ENST00000541204 CELF1Q92879 486 aaKnown RBP14.48□□□□□ -0.09
RNF4-222ENST00000541204 PHKBQ93100 1093 aa14.48□□□□□ -0.09
RNF4-222ENST00000541204 CGNQ9P2M7 1197 aaKnown RBP14.48□□□□□ -0.09
RNF4-222ENST00000541204 ZNF215Q9UL58 517 aaPredicted RBP14.48□□□□□ -0.09
RNF4-222ENST00000541204 ANGEL1Q9UNK9 670 aaKnown RBP14.48□□□□□ -0.09
RNF4-222ENST00000541204 PATL2C9JE40 543 aaKnown RBP14.48□□□□□ -0.09
RNF4-222ENST00000541204 VPS37DQ86XT2 251 aa14.48□□□□□ -0.09
RNF4-222ENST00000541204 RAI14Q9P0K7 980 aa14.48□□□□□ -0.09
RNF4-222ENST00000541204 SPTLC2O15270 562 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 METAP2P50579 478 aaKnown RBP eCLIP14.47□□□□□ -0.09
RNF4-222ENST00000541204 ADGRA1Q86SQ6 560 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 AMIGO3Q86WK7 504 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 FBXL16Q8N461 479 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 FBXO18Q8NFZ0 1043 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 CHMP4CQ96CF2 233 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 GTPBP4Q9BZE4 634 aaKnown RBP14.47□□□□□ -0.09
RNF4-222ENST00000541204 OGFRQ9NZT2 677 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 TACC3Q9Y6A5 838 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 GSG1L2A8MUP6 293 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 UBE2Q2LH0YL09 131 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 NPHP1O15259 732 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 DHX16O60231 1041 aaKnown RBP14.47□□□□□ -0.09
RNF4-222ENST00000541204 IGSF3O75054 1194 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 SMC2O95347 1197 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 CYP7A1P22680 504 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 TMEM67Q5HYA8 995 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 MYSM1Q5VVJ2 828 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 KCNG4Q8TDN1 519 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 SDR42E1Q8WUS8 393 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 XPO4Q9C0E2 1151 aaKnown RBP14.47□□□□□ -0.09
RNF4-222ENST00000541204 POLR3EQ9NVU0 708 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 JAG2Q9Y219 1238 aa14.47□□□□□ -0.09
RNF4-222ENST00000541204 KIF28PB7ZC32 967 aa14.46□□□□□ -0.09
RNF4-222ENST00000541204 SMIM22K7EJ46 135 aa14.46□□□□□ -0.09
RNF4-222ENST00000541204 KLRK1P26718 216 aa14.46□□□□□ -0.09
RNF4-222ENST00000541204 GSDMDP57764 484 aa14.46□□□□□ -0.09
RNF4-222ENST00000541204 IFNKQ9P0W0 207 aa14.46□□□□□ -0.09
RNF4-222ENST00000541204 SH2B2O14492 632 aaPredicted RBP14.46□□□□□ -0.09
RNF4-222ENST00000541204 CCDC82Q8N4S0 544 aa14.46□□□□□ -0.09
RNF4-222ENST00000541204 OSBPL5Q9H0X9 879 aaPredicted RBP14.46□□□□□ -0.09
RNF4-222ENST00000541204 ZSWIM5Q9P217 1185 aa14.46□□□□□ -0.09
RNF4-222ENST00000541204 MINDY4BA8MYZ0 360 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 IFIT3O14879 490 aaKnown RBP14.45□□□□□ -0.1
RNF4-222ENST00000541204 ZNF202O95125 648 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 YEATS4O95619 227 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 SLC3A2P08195 630 aaKnown RBP14.45□□□□□ -0.1
RNF4-222ENST00000541204 CDC27P30260 824 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 ISM2Q6H9L7 571 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 CLEC4GQ6UXB4 293 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 TMC6Q7Z403 805 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 NBPF5PQ86XG9 351 aaPredicted RBP14.45□□□□□ -0.1
RNF4-222ENST00000541204 USP21Q9UK80 565 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 EP400Q96L91 3159 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 ATRNO75882 1429 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 VPS72Q15906 364 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 APOA5Q6Q788 366 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 SYNE3Q6ZMZ3 975 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 SLC51AQ86UW1 340 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 KIF18AQ8NI77 898 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 MINPP1Q9UNW1 487 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 BCL9LQ86UU0 1499 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 ZPR1O75312 459 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 ARMCX5Q6P1M9 558 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 MFSD6Q6ZSS7 791 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 SETDB2Q96T68 719 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 TFCP2L1Q9NZI6 479 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 IMPACTQ9P2X3 320 aa14.45□□□□□ -0.1
RNF4-222ENST00000541204 CCNL1Q9UK58 526 aaPredicted RBP14.45□□□□□ -0.1
RNF4-222ENST00000541204 MARCKSP29966 332 aaPredicted RBP14.44□□□□□ -0.1
RNF4-222ENST00000541204 E4F1Q66K89 784 aaPredicted RBP14.44□□□□□ -0.1
RNF4-222ENST00000541204 BRAPQ7Z569 592 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 CMTR1Q8N1G2 835 aaKnown RBP14.44□□□□□ -0.1
RNF4-222ENST00000541204 IGDCC4Q8TDY8 1250 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 BPIFA3Q9BQP9 254 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 DDX41Q9UJV9 622 aaKnown RBP14.44□□□□□ -0.1
RNF4-222ENST00000541204 MYH7P12883 1935 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 LRP5O75197 1615 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 TAF1P21675 1872 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 ZBTB43O43298 467 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 PFKFB1P16118 471 aa14.44□□□□□ -0.1
RNF4-222ENST00000541204 KIF23Q02241 960 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms