RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 NOP58Q9Y2X3 529 aaKnown RBP7.93□□□□□ -1.14
SNHG1-212ENST00000539975 A0A1B0GUL7 405 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 USP17L3A6NCW0 530 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 USP17L4A6NCW7 530 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 H7C1D1 291 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 FZD9O00144 591 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 RAD17O75943 681 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 TIMM10P62072 90 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 TTLL5Q6EMB2 1281 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 C15orf52Q6ZUT6 534 aaKnown RBP7.92□□□□□ -1.14
SNHG1-212ENST00000539975 USP17L1Q7RTZ2 530 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 GCC1Q96CN9 775 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 GPR101Q96P66 508 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-212ENST00000539975 GPR108Q9NPR9 543 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 PRDM9Q9NQV7 894 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 HDAC9Q9UKV0 1011 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 FCF1Q9Y324 198 aaKnown RBP7.92□□□□□ -1.14
SNHG1-212ENST00000539975 PCDHB15Q9Y5E8 787 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 MYO3BQ8WXR4 1341 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 COL11A2P13942 1736 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-212ENST00000539975 LAMB2P55268 1798 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 DLEC1Q9Y238 1755 aa7.92□□□□□ -1.14
SNHG1-212ENST00000539975 SASH1O94885 1247 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 UQCRFS1P1P0C7P4 283 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 VEGFAP15692 232 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-212ENST00000539975 RPS12P25398 132 aaKnown RBP7.91□□□□□ -1.14
SNHG1-212ENST00000539975 GYG1P46976 350 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 MMP14P50281 582 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 GTF2IP78347 998 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 CXCL9Q07325 125 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 HDAC1Q13547 482 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-212ENST00000539975 TTC39AQ5SRH9 613 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 STRIP1Q5VSL9 837 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 AACSQ86V21 672 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 ZGPATQ8N5A5 531 aaKnown RBP7.91□□□□□ -1.14
SNHG1-212ENST00000539975 PRR7Q8TB68 274 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 RHPN1Q8TCX5 695 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 TBC1D22AQ8WUA7 517 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 FAM84BQ96KN1 310 aaPredicted RBP7.91□□□□□ -1.14
SNHG1-212ENST00000539975 DCTPP1Q9H773 170 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 CD209Q9NNX6 404 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 LIMD1Q9UGP4 676 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 DENND2AQ9ULE3 1009 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 SLX4Q8IY92 1834 aa7.91□□□□□ -1.14
SNHG1-212ENST00000539975 KIAA1551Q9HCM1 1747 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 SNAP23O00161 211 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 LILRB3O75022 631 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 DDNO94850 711 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-212ENST00000539975 IL1R1P14778 569 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 CHAF1AQ13111 956 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-212ENST00000539975 TNNI3KQ59H18 835 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 ANKRD45Q5TZF3 282 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 SPTY2D1Q68D10 685 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-212ENST00000539975 PNMA8AQ86V59 439 aaPredicted RBP7.9□□□□□ -1.14
SNHG1-212ENST00000539975 SIRT2Q8IXJ6 389 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 VGLL2Q8N8G2 317 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 AGBL3Q8NEM8 1001 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 WDR66Q8TBY9 1149 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 XAGE2Q96GT9 111 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 IL1RAPL2Q9NP60 686 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 HACL1Q9UJ83 578 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 FPGT-TNNI3KV9GXZ4 949 aa7.9□□□□□ -1.14
SNHG1-212ENST00000539975 WTIPA6NIX2 430 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-212ENST00000539975 PSMD14O00487 310 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 ZBTB24O43167 697 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-212ENST00000539975 CD2BP2O95400 341 aaKnown RBP7.89□□□□□ -1.15
SNHG1-212ENST00000539975 VIL1P09327 827 aaKnown RBP7.89□□□□□ -1.15
SNHG1-212ENST00000539975 USP17L8P0C7I0 530 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 PRKCSHP14314 528 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-212ENST00000539975 FGFR2P21802 821 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 PRELPP51888 382 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 RBM5P52756 815 aaKnown RBP eCLIP7.89□□□□□ -1.15
SNHG1-212ENST00000539975 CCDC102BQ68D86 513 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 FBXO33Q7Z6M2 555 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 SLC51AQ86UW1 340 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 TXNRD3Q86VQ6 643 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 TDRD7Q8NHU6 1098 aaKnown RBP7.89□□□□□ -1.15
SNHG1-212ENST00000539975 DPF2Q92785 391 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 CCDC136Q96JN2 1154 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 CCDC8Q9H0W5 538 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-212ENST00000539975 RRAGCQ9HB90 399 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 POLR3EQ9NVU0 708 aa7.89□□□□□ -1.15
SNHG1-212ENST00000539975 IQSEC3Q9UPP2 1182 aaPredicted RBP7.89□□□□□ -1.15
SNHG1-212ENST00000539975 MAST3O60307 1309 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 ZNF541Q9H0D2 1346 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 ARFGEF1Q9Y6D6 1849 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 ERC2O15083 957 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 MYO1BO43795 1136 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 KLRK1P26718 216 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 GMPSP49915 693 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-212ENST00000539975 FKBP1AP62942 108 aaKnown RBP7.88□□□□□ -1.15
SNHG1-212ENST00000539975 LAPTM4AQ15012 233 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 PTPRNQ16849 979 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 EAPPQ56P03 285 aaPredicted RBP7.88□□□□□ -1.15
SNHG1-212ENST00000539975 MFSD14BQ5SR56 506 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 ERICH6BQ5W0A0 696 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 SPRYD7Q5W111 196 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 B4GALNT3Q6L9W6 998 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 LIAT1Q6ZQX7 453 aa7.88□□□□□ -1.15
SNHG1-212ENST00000539975 ZNF598Q86UK7 904 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms