RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 FER1L6Q2WGJ9 1857 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 PASKQ96RG2 1323 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 RIOK3O14730 519 aaKnown RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 MYBL2P10244 700 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 PDE6BP35913 854 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 EIF5P55010 431 aaKnown RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 SKOR2Q2VWA4 1001 aaPredicted RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 NCAPG2Q86XI2 1143 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 FMNL3Q8IVF7 1028 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 EFCAB13Q8IY85 973 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 RHPN1Q8TCX5 695 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 BRIP1Q9BX63 1249 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 TAF1DQ9H5J8 278 aaPredicted RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 BICC1Q9H694 974 aaKnown RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 ZNF277Q9NRM2 450 aaPredicted RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 UTP6Q9NYH9 597 aaKnown RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 CPSF2Q9P2I0 782 aaKnown RBP14.57□□□□□ -0.08
DDX55-206ENST00000539934 CCDC39Q9UFE4 941 aa14.57□□□□□ -0.08
DDX55-206ENST00000539934 SALL3Q9BXA9 1300 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 TMEM88BA6NKF7 163 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 TNRC18O15417 2968 aaPredicted RBP14.56□□□□□ -0.08
DDX55-206ENST00000539934 ALDH1B1P30837 517 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 MCCD1P59942 119 aaPredicted RBP14.56□□□□□ -0.08
DDX55-206ENST00000539934 SLC5A9Q2M3M2 681 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 ZFYVE27Q5T4F4 411 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 CLEC4GQ6UXB4 293 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 ABHD8Q96I13 439 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 MAGEC2Q9UBF1 373 aaPredicted RBP14.56□□□□□ -0.08
DDX55-206ENST00000539934 TSKSQ9UJT2 592 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 ZNF541Q9H0D2 1346 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 DICER1Q9UPY3 1922 aaKnown RBP14.56□□□□□ -0.08
DDX55-206ENST00000539934 FAM177BA6PVY3 158 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 ITGBL1O95965 494 aaPredicted RBP14.56□□□□□ -0.08
DDX55-206ENST00000539934 FLT3P36888 993 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 KIAA2012Q0VF49 1180 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 TSHZ3Q63HK5 1081 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 WBP1LQ9NX94 342 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 PNMA2Q9UL42 364 aa14.56□□□□□ -0.08
DDX55-206ENST00000539934 HMGB1P1B2RPK0 211 aaPredicted RBP14.55□□□□□ -0.08
DDX55-206ENST00000539934 ATP5J2-PTCD1G3V325 749 aa14.55□□□□□ -0.08
DDX55-206ENST00000539934 SLC34A2O95436 690 aa14.55□□□□□ -0.08
DDX55-206ENST00000539934 CCDC15Q0P6D6 951 aa14.55□□□□□ -0.08
DDX55-206ENST00000539934 MCM6Q14566 821 aa14.55□□□□□ -0.08
DDX55-206ENST00000539934 TTLL7Q6ZT98 887 aa14.55□□□□□ -0.08
DDX55-206ENST00000539934 TXLNBQ8N3L3 684 aa14.55□□□□□ -0.08
DDX55-206ENST00000539934 CNBD1Q8NA66 436 aa14.55□□□□□ -0.08
DDX55-206ENST00000539934 C17orf50Q8WW18 174 aa14.55□□□□□ -0.08
DDX55-206ENST00000539934 KAZALD1Q96I82 304 aa14.55□□□□□ -0.08
DDX55-206ENST00000539934 IQCGQ9H095 443 aaKnown RBP14.55□□□□□ -0.08
DDX55-206ENST00000539934 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.55□□□□□ -0.08
DDX55-206ENST00000539934 CCDC85CA6NKD9 419 aa14.54□□□□□ -0.08
DDX55-206ENST00000539934 TSNAXIP1Q2TAA8 658 aa14.54□□□□□ -0.08
DDX55-206ENST00000539934 LDHDQ86WU2 507 aa14.54□□□□□ -0.08
DDX55-206ENST00000539934 RBM12BQ8IXT5 1001 aaKnown RBP14.54□□□□□ -0.08
DDX55-206ENST00000539934 DRAXINQ8NBI3 349 aaPredicted RBP14.54□□□□□ -0.08
DDX55-206ENST00000539934 STARD3NLO95772 234 aa14.54□□□□□ -0.08
DDX55-206ENST00000539934 SRGNP10124 158 aa14.54□□□□□ -0.08
DDX55-206ENST00000539934 ICA1Q05084 483 aa14.54□□□□□ -0.08
DDX55-206ENST00000539934 TBC1D25Q3MII6 688 aa14.54□□□□□ -0.08
DDX55-206ENST00000539934 NAIF1Q69YI7 327 aaPredicted RBP14.54□□□□□ -0.08
DDX55-206ENST00000539934 NUTM1Q86Y26 1132 aa14.54□□□□□ -0.08
DDX55-206ENST00000539934 ABT1Q9ULW3 272 aaKnown RBP14.54□□□□□ -0.08
DDX55-206ENST00000539934 AK9Q5TCS8 1911 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 A0A087WZG4 1122 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 CDKL5O76039 1030 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 SYT10Q6XYQ8 523 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 UBE3BQ7Z3V4 1068 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 ERC1Q8IUD2 1116 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 TSC1Q92574 1164 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 SETDB2Q96T68 719 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 ZBTB3Q9H5J0 574 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 STAP2Q9UGK3 403 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 PA2G4Q9UQ80 394 aaKnown RBP14.53□□□□□ -0.08
DDX55-206ENST00000539934 TMCO5BA8MYB1 307 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 HSPA8P11142 646 aaKnown RBP14.53□□□□□ -0.08
DDX55-206ENST00000539934 TDRD7Q8NHU6 1098 aaKnown RBP14.53□□□□□ -0.08
DDX55-206ENST00000539934 STK24Q9Y6E0 443 aa14.53□□□□□ -0.08
DDX55-206ENST00000539934 AOX1Q06278 1338 aa14.52□□□□□ -0.08
DDX55-206ENST00000539934 IQCA1LA6NCM1 817 aa14.52□□□□□ -0.08
DDX55-206ENST00000539934 MAGEA9P43362 315 aa14.52□□□□□ -0.08
DDX55-206ENST00000539934 TRPC1P48995 793 aa14.52□□□□□ -0.08
DDX55-206ENST00000539934 DEFB115Q30KQ5 88 aa14.52□□□□□ -0.08
DDX55-206ENST00000539934 RPUSD2Q8IZ73 545 aaKnown RBP14.52□□□□□ -0.08
DDX55-206ENST00000539934 CNTROBQ8N137 903 aa14.52□□□□□ -0.08
DDX55-206ENST00000539934 JARID2Q92833 1246 aaPredicted RBP14.52□□□□□ -0.08
DDX55-206ENST00000539934 CCDC85AQ96PX6 553 aaPredicted RBP14.52□□□□□ -0.08
DDX55-206ENST00000539934 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.52□□□□□ -0.08
DDX55-206ENST00000539934 TRIM66O15016 1216 aa14.51□□□□□ -0.09
DDX55-206ENST00000539934 RPS6KA3P51812 740 aa14.51□□□□□ -0.09
DDX55-206ENST00000539934 PSMD2Q13200 908 aa14.51□□□□□ -0.09
DDX55-206ENST00000539934 G3BP1Q13283 466 aaKnown RBP eCLIP14.51□□□□□ -0.09
DDX55-206ENST00000539934 C16orf87Q6PH81 154 aa14.51□□□□□ -0.09
DDX55-206ENST00000539934 NFXL1Q6ZNB6 911 aa14.51□□□□□ -0.09
DDX55-206ENST00000539934 SRLQ86TD4 932 aa14.51□□□□□ -0.09
DDX55-206ENST00000539934 SLC51AQ86UW1 340 aa14.51□□□□□ -0.09
DDX55-206ENST00000539934 IQCF2Q8IXL9 164 aa14.51□□□□□ -0.09
DDX55-206ENST00000539934 CLASRPQ8N2M8 674 aaKnown RBP14.51□□□□□ -0.09
DDX55-206ENST00000539934 CNKSR1Q969H4 720 aa14.51□□□□□ -0.09
DDX55-206ENST00000539934 RILPL2Q969X0 211 aa14.51□□□□□ -0.09
DDX55-206ENST00000539934 MIEF2Q96C03 454 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms