RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ALPK3Q96L96 1907 aa18.59■□□□□ 0.57
USB1-203ENST00000539737 PHF20L1A8MW92 1017 aa18.59■□□□□ 0.57
USB1-203ENST00000539737 SOX1O00570 391 aaPredicted RBP18.59■□□□□ 0.57
USB1-203ENST00000539737 NOL9Q5SY16 702 aaKnown RBP18.59■□□□□ 0.57
USB1-203ENST00000539737 WDR66Q8TBY9 1149 aa18.59■□□□□ 0.57
USB1-203ENST00000539737 U2AF1L4Q8WU68 220 aaKnown RBP18.59■□□□□ 0.57
USB1-203ENST00000539737 LPIN2Q92539 896 aa18.59■□□□□ 0.57
USB1-203ENST00000539737 DDX4Q9NQI0 724 aaKnown RBP18.59■□□□□ 0.57
USB1-203ENST00000539737 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.57
USB1-203ENST00000539737 COL6A3P12111 3177 aa18.58■□□□□ 0.57
USB1-203ENST00000539737 DDTLA6NHG4 134 aaPredicted RBP18.58■□□□□ 0.56
USB1-203ENST00000539737 FARP2O94887 1054 aaPredicted RBP18.58■□□□□ 0.56
USB1-203ENST00000539737 GJB1P08034 283 aa18.58■□□□□ 0.56
USB1-203ENST00000539737 PICALMQ13492 652 aa18.58■□□□□ 0.56
USB1-203ENST00000539737 ATP2B3Q16720 1220 aa18.58■□□□□ 0.56
USB1-203ENST00000539737 HOOK2Q96ED9 719 aa18.58■□□□□ 0.56
USB1-203ENST00000539737 SUGT1Q9Y2Z0 365 aa18.58■□□□□ 0.56
USB1-203ENST00000539737 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.58■□□□□ 0.56
USB1-203ENST00000539737 GNRH1P01148 92 aa18.57■□□□□ 0.56
USB1-203ENST00000539737 INHAP05111 366 aa18.57■□□□□ 0.56
USB1-203ENST00000539737 LDHBP07195 334 aaKnown RBP18.57■□□□□ 0.56
USB1-203ENST00000539737 FLT3LGP49771 235 aa18.57■□□□□ 0.56
USB1-203ENST00000539737 PRMT2P55345 433 aa18.57■□□□□ 0.56
USB1-203ENST00000539737 FCGRTP55899 365 aa18.57■□□□□ 0.56
USB1-203ENST00000539737 DIS3LQ8TF46 1054 aaKnown RBP18.57■□□□□ 0.56
USB1-203ENST00000539737 PARK7Q99497 189 aaKnown RBP18.57■□□□□ 0.56
USB1-203ENST00000539737 API5Q9BZZ5 524 aaKnown RBP18.57■□□□□ 0.56
USB1-203ENST00000539737 RFX7Q2KHR2 1363 aa18.56■□□□□ 0.56
USB1-203ENST00000539737 TRIM75PA6NK02 468 aa18.56■□□□□ 0.56
USB1-203ENST00000539737 ADCY3O60266 1144 aa18.56■□□□□ 0.56
USB1-203ENST00000539737 PTPRAP18433 802 aa18.56■□□□□ 0.56
USB1-203ENST00000539737 SCYL3Q8IZE3 742 aa18.56■□□□□ 0.56
USB1-203ENST00000539737 LRCH3Q96II8 777 aa18.56■□□□□ 0.56
USB1-203ENST00000539737 PRO3102Q9H379 93 aa18.56■□□□□ 0.56
USB1-203ENST00000539737 DOCK1Q14185 1865 aa18.56■□□□□ 0.56
USB1-203ENST00000539737 A0A0G2JLL6 359 aaPredicted RBP18.55■□□□□ 0.56
USB1-203ENST00000539737 ZBTB7BO15156 539 aaPredicted RBP18.55■□□□□ 0.56
USB1-203ENST00000539737 PEX10O60683 326 aa18.55■□□□□ 0.56
USB1-203ENST00000539737 HOXD10P28358 340 aa18.55■□□□□ 0.56
USB1-203ENST00000539737 TREML2Q5T2D2 321 aa18.55■□□□□ 0.56
USB1-203ENST00000539737 PRRT2Q7Z6L0 340 aaPredicted RBP18.55■□□□□ 0.56
USB1-203ENST00000539737 ZSCAN29Q8IWY8 852 aaPredicted RBP18.55■□□□□ 0.56
USB1-203ENST00000539737 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
USB1-203ENST00000539737 DEFB118Q96PH6 123 aa18.55■□□□□ 0.56
USB1-203ENST00000539737 NOB1Q9ULX3 412 aaKnown RBP18.55■□□□□ 0.56
USB1-203ENST00000539737 IPO8O15397 1037 aaKnown RBP18.54■□□□□ 0.56
USB1-203ENST00000539737 TRIM32Q13049 653 aa18.54■□□□□ 0.56
USB1-203ENST00000539737 ANKRD13CQ8N6S4 541 aa18.54■□□□□ 0.56
USB1-203ENST00000539737 AFG3L2Q9Y4W6 797 aa18.54■□□□□ 0.56
USB1-203ENST00000539737 LRRFIP2Q9Y608 721 aaKnown RBP18.54■□□□□ 0.56
USB1-203ENST00000539737 CXCL11O14625 94 aa18.53■□□□□ 0.56
USB1-203ENST00000539737 TNPO2O14787 897 aaKnown RBP18.53■□□□□ 0.56
USB1-203ENST00000539737 TIMM10P62072 90 aa18.53■□□□□ 0.56
USB1-203ENST00000539737 UBXN2AP68543 259 aa18.53■□□□□ 0.56
USB1-203ENST00000539737 RASGRF1Q13972 1273 aa18.53■□□□□ 0.56
USB1-203ENST00000539737 RRP1BQ14684 758 aaKnown RBP18.53■□□□□ 0.56
USB1-203ENST00000539737 PI16Q6UXB8 463 aa18.53■□□□□ 0.56
USB1-203ENST00000539737 SLAIN1Q8ND83 568 aa18.53■□□□□ 0.56
USB1-203ENST00000539737 ZNF384Q8TF68 577 aa18.53■□□□□ 0.56
USB1-203ENST00000539737 PICK1Q9NRD5 415 aa18.53■□□□□ 0.56
USB1-203ENST00000539737 ABCF2Q9UG63 623 aa18.53■□□□□ 0.56
USB1-203ENST00000539737 STAP2Q9UGK3 403 aa18.53■□□□□ 0.56
USB1-203ENST00000539737 SGPL1O95470 568 aa18.52■□□□□ 0.56
USB1-203ENST00000539737 BTDP43251 543 aa18.52■□□□□ 0.56
USB1-203ENST00000539737 CCDC102BQ68D86 513 aa18.52■□□□□ 0.56
USB1-203ENST00000539737 CEP126Q9P2H0 1117 aa18.52■□□□□ 0.56
USB1-203ENST00000539737 HDAC5Q9UQL6 1122 aa18.52■□□□□ 0.56
USB1-203ENST00000539737 GAKO14976 1311 aa18.51■□□□□ 0.55
USB1-203ENST00000539737 TFRCP02786 760 aaKnown RBP18.51■□□□□ 0.55
USB1-203ENST00000539737 NKX2-3Q8TAU0 364 aa18.51■□□□□ 0.55
USB1-203ENST00000539737 PAWRQ96IZ0 340 aaKnown RBP18.51■□□□□ 0.55
USB1-203ENST00000539737 HTATIP2Q9BUP3 242 aa18.51■□□□□ 0.55
USB1-203ENST00000539737 BCAR3O75815 825 aa18.5■□□□□ 0.55
USB1-203ENST00000539737 UBTFL1P0CB47 393 aaPredicted RBP18.5■□□□□ 0.55
USB1-203ENST00000539737 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
USB1-203ENST00000539737 TBC1D9Q6ZT07 1266 aa18.5■□□□□ 0.55
USB1-203ENST00000539737 DZIP1Q86YF9 867 aaKnown RBP18.5■□□□□ 0.55
USB1-203ENST00000539737 SMCR8Q8TEV9 937 aaPredicted RBP18.5■□□□□ 0.55
USB1-203ENST00000539737 MEIS3Q99687 375 aa18.5■□□□□ 0.55
USB1-203ENST00000539737 IDI2Q9BXS1 227 aa18.5■□□□□ 0.55
USB1-203ENST00000539737 DENND2AQ9ULE3 1009 aa18.5■□□□□ 0.55
USB1-203ENST00000539737 ZMYND8Q9ULU4 1186 aaPredicted RBP18.5■□□□□ 0.55
USB1-203ENST00000539737 SALL1Q9NSC2 1324 aa18.49■□□□□ 0.55
USB1-203ENST00000539737 A0A0C4DFX4 3053 aa18.49■□□□□ 0.55
USB1-203ENST00000539737 EVI5O60447 810 aa18.49■□□□□ 0.55
USB1-203ENST00000539737 ENTPD3O75355 529 aa18.49■□□□□ 0.55
USB1-203ENST00000539737 ATF7IPQ6VMQ6 1270 aa18.49■□□□□ 0.55
USB1-203ENST00000539737 FRAT1Q92837 279 aaPredicted RBP18.49■□□□□ 0.55
USB1-203ENST00000539737 GNL3LQ9NVN8 582 aaKnown RBP18.49■□□□□ 0.55
USB1-203ENST00000539737 ATAD5Q96QE3 1844 aa18.49■□□□□ 0.55
USB1-203ENST00000539737 CIAO1O76071 339 aa18.48■□□□□ 0.55
USB1-203ENST00000539737 RHBDL3P58872 404 aa18.48■□□□□ 0.55
USB1-203ENST00000539737 MECOMQ03112 1051 aa18.48■□□□□ 0.55
USB1-203ENST00000539737 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
USB1-203ENST00000539737 FASTKD5Q7L8L6 764 aaKnown RBP18.48■□□□□ 0.55
USB1-203ENST00000539737 TRIM27P14373 513 aa18.47■□□□□ 0.55
USB1-203ENST00000539737 SYN1P17600 705 aa18.47■□□□□ 0.55
USB1-203ENST00000539737 TFCP2Q12800 502 aa18.47■□□□□ 0.55
USB1-203ENST00000539737 SPP2Q13103 211 aa18.47■□□□□ 0.55
USB1-203ENST00000539737 C7orf61Q8IZ16 206 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms