RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CAVIN2O95810 425 aa14.52□□□□□ -0.09
SFSWAP-208ENST00000539506 CTDSPL2Q05D32 466 aa14.52□□□□□ -0.09
SFSWAP-208ENST00000539506 APOA5Q6Q788 366 aa14.52□□□□□ -0.09
SFSWAP-208ENST00000539506 PPP1R13BQ96KQ4 1090 aa14.52□□□□□ -0.09
SFSWAP-208ENST00000539506 ANO10Q9NW15 660 aa14.52□□□□□ -0.09
SFSWAP-208ENST00000539506 TTF1Q15361 905 aaPredicted RBP14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 NTRK3Q16288 839 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 NEK11Q8NG66 645 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 CCDC34Q96HJ3 373 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 ZMYM6O95789 1325 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 ERVV-1B6SEH8 477 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 PRKAB2O43741 272 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 CDC25BP30305 580 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 CLCN6P51797 869 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 PUM3Q15397 648 aaKnown RBP14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 INTS5Q6P9B9 1019 aaKnown RBP14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 SPATA5Q8NB90 893 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 LPIN2Q92539 896 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 DPF2Q92785 391 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 MRFAP1L1Q96HT8 127 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 LY9Q9HBG7 655 aa14.51□□□□□ -0.09
SFSWAP-208ENST00000539506 YEATS4O95619 227 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 IL6STP40189 918 aaPredicted RBP14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 METAP2P50579 478 aaKnown RBP eCLIP14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 ANO1Q5XXA6 986 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 MICU3Q86XE3 530 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 MAGEB6Q8N7X4 407 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 ERO1AQ96HE7 468 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 KIAA1468Q9P260 1216 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 COL4A1P02462 1669 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 LRP5O75197 1615 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 GNL2Q13823 731 aaKnown RBP14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 KCNG4Q8TDN1 519 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 NOL10Q9BSC4 688 aaKnown RBP14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 ALG1Q9BT22 464 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 ARMT1Q9H993 441 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 ZSWIM5Q9P217 1185 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 WTIPA6NIX2 430 aaPredicted RBP14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 ZNF202O95125 648 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 SFPQP23246 707 aaKnown RBP eCLIP14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 EIF5P55010 431 aaKnown RBP14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 IRX5P78411 483 aaPredicted RBP14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 TRDNQ13061 729 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 SPECC1Q5M775 1068 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 BRAPQ7Z569 592 aa14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 UTP14AQ9BVJ6 771 aaKnown RBP14.5□□□□□ -0.09
SFSWAP-208ENST00000539506 EXOC5O00471 708 aa14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 CDK11BP21127 795 aaKnown RBP14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 GABPB1Q06547 395 aaPredicted RBP14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 KRT40Q6A162 431 aa14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 VPS37DQ86XT2 251 aa14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 IFNL3Q8IZI9 196 aa14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 AIDAQ96BJ3 306 aa14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 MBD4O95243 580 aa14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 PFKFB1P16118 471 aa14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 BCAMP50895 628 aa14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 CHMP4CQ96CF2 233 aa14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 CARD6Q9BX69 1037 aa14.49□□□□□ -0.09
SFSWAP-208ENST00000539506 GSG1L2A8MUP6 293 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 SMIM22K7EJ46 135 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 PDILTQ8N807 584 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 MROH5Q6ZUA9 1318 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 KDM4FA0A1W2PPD8 638 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 PATL2C9JE40 543 aaKnown RBP14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 TMEM232C9JQI7 657 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 GUCY1A2P33402 732 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 SLC39A14Q15043 492 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 PTPAQ15257 358 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 MAP3K14Q99558 947 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 FANCGO15287 622 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 UQCRFS1P1P0C7P4 283 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 SHC4Q6S5L8 630 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 SYNE3Q6ZMZ3 975 aa14.48□□□□□ -0.09
SFSWAP-208ENST00000539506 LCORLQ8N3X6 602 aa14.47□□□□□ -0.09
SFSWAP-208ENST00000539506 CLIC6Q96NY7 704 aa14.47□□□□□ -0.09
SFSWAP-208ENST00000539506 CMA1P23946 247 aa14.47□□□□□ -0.09
SFSWAP-208ENST00000539506 ST5P78524 1137 aa14.47□□□□□ -0.09
SFSWAP-208ENST00000539506 NCAPHQ15003 741 aa14.47□□□□□ -0.09
SFSWAP-208ENST00000539506 ALX1Q15699 326 aa14.47□□□□□ -0.09
SFSWAP-208ENST00000539506 SGMS1Q86VZ5 419 aa14.47□□□□□ -0.09
SFSWAP-208ENST00000539506 ACSBG1Q96GR2 724 aa14.47□□□□□ -0.09
SFSWAP-208ENST00000539506 ZKSCAN3Q9BRR0 538 aa14.47□□□□□ -0.09
SFSWAP-208ENST00000539506 ZBTB43O43298 467 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 SERPINC1P01008 464 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 HNRNPH2P55795 449 aaKnown RBP14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 CFAP100Q494V2 611 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 TMEM67Q5HYA8 995 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 ADGRA1Q86SQ6 560 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 FHOD1Q9Y613 1164 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 ECM29Q5VYK3 1845 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 SLC3A2P08195 630 aaKnown RBP14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 CRKLP46109 303 aaKnown RBP14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 ITPK1Q13572 414 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 HOMEZQ8IX15 550 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 MNS1Q8NEH6 495 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 UBXN4Q92575 508 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 HSD3B7Q9H2F3 369 aa14.46□□□□□ -0.09
SFSWAP-208ENST00000539506 CAMTA2O94983 1202 aa14.46□□□□□ -0.1
SFSWAP-208ENST00000539506 PLA2G4AP47712 749 aa14.46□□□□□ -0.1
SFSWAP-208ENST00000539506 SYCP1Q15431 976 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms