RNA–Protein interactions for RNA: ENST00000539241.1

CCND1-204, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 920 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-204ENST00000539241 CXCL11O14625 94 aa17.25■□□□□ 0.35
CCND1-204ENST00000539241 G3BP1Q13283 466 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCND1-204ENST00000539241 PICALMQ13492 652 aa17.25■□□□□ 0.35
CCND1-204ENST00000539241 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
CCND1-204ENST00000539241 SH3BP5LQ7L8J4 393 aa17.25■□□□□ 0.35
CCND1-204ENST00000539241 NBPF11Q86T75 865 aa17.25■□□□□ 0.35
CCND1-204ENST00000539241 TMEM106CQ9BVX2 250 aa17.25■□□□□ 0.35
CCND1-204ENST00000539241 DDX4Q9NQI0 724 aaKnown RBP17.25■□□□□ 0.35
CCND1-204ENST00000539241 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
CCND1-204ENST00000539241 CPA4Q9UI42 421 aa17.25■□□□□ 0.35
CCND1-204ENST00000539241 BRCA2P51587 3418 aa17.25■□□□□ 0.35
CCND1-204ENST00000539241 DDTLA6NHG4 134 aaPredicted RBP17.24■□□□□ 0.35
CCND1-204ENST00000539241 EN2P19622 333 aaPredicted RBP17.24■□□□□ 0.35
CCND1-204ENST00000539241 MECOMQ03112 1051 aa17.24■□□□□ 0.35
CCND1-204ENST00000539241 MOGSQ13724 837 aa17.24■□□□□ 0.35
CCND1-204ENST00000539241 PI16Q6UXB8 463 aa17.24■□□□□ 0.35
CCND1-204ENST00000539241 SCYL3Q8IZE3 742 aa17.24■□□□□ 0.35
CCND1-204ENST00000539241 TMEM57Q8N5G2 664 aa17.24■□□□□ 0.35
CCND1-204ENST00000539241 PICK1Q9NRD5 415 aa17.24■□□□□ 0.35
CCND1-204ENST00000539241 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
CCND1-204ENST00000539241 GPR75-ASB3A0A0A6YYF3 556 aa17.23■□□□□ 0.35
CCND1-204ENST00000539241 GNRH1P01148 92 aa17.23■□□□□ 0.35
CCND1-204ENST00000539241 ARID4AP29374 1257 aaPredicted RBP17.23■□□□□ 0.35
CCND1-204ENST00000539241 RHBDL3P58872 404 aa17.23■□□□□ 0.35
CCND1-204ENST00000539241 ZKSCAN2Q63HK3 967 aa17.23■□□□□ 0.35
CCND1-204ENST00000539241 SPATA5Q8NB90 893 aa17.23■□□□□ 0.35
CCND1-204ENST00000539241 ZNF384Q8TF68 577 aa17.23■□□□□ 0.35
CCND1-204ENST00000539241 ZHX2Q9Y6X8 837 aa17.23■□□□□ 0.35
CCND1-204ENST00000539241 ADGRA2Q96PE1 1338 aa17.22■□□□□ 0.35
CCND1-204ENST00000539241 ECM2O94769 699 aaPredicted RBP17.22■□□□□ 0.35
CCND1-204ENST00000539241 LDHCP07864 332 aa17.22■□□□□ 0.35
CCND1-204ENST00000539241 SLURP2P0DP57 97 aa17.22■□□□□ 0.35
CCND1-204ENST00000539241 PTPRAP18433 802 aa17.22■□□□□ 0.35
CCND1-204ENST00000539241 PRMT2P55345 433 aa17.22■□□□□ 0.35
CCND1-204ENST00000539241 GSTO1P78417 241 aa17.22■□□□□ 0.35
CCND1-204ENST00000539241 MAP3K10Q02779 954 aa17.22■□□□□ 0.35
CCND1-204ENST00000539241 TBC1D9Q6ZT07 1266 aa17.22■□□□□ 0.35
CCND1-204ENST00000539241 NSUN4Q96CB9 384 aaKnown RBP17.22■□□□□ 0.35
CCND1-204ENST00000539241 PARK7Q99497 189 aaKnown RBP17.22■□□□□ 0.35
CCND1-204ENST00000539241 A0A0G2JLL6 359 aaPredicted RBP17.21■□□□□ 0.35
CCND1-204ENST00000539241 UQCRFS1P1P0C7P4 283 aa17.21■□□□□ 0.35
CCND1-204ENST00000539241 MCAMP43121 646 aa17.21■□□□□ 0.35
CCND1-204ENST00000539241 PSMC4P43686 418 aa17.21■□□□□ 0.35
CCND1-204ENST00000539241 SLC4A8Q2Y0W8 1093 aa17.21■□□□□ 0.35
CCND1-204ENST00000539241 GPAT2Q6NUI2 795 aa17.21■□□□□ 0.35
CCND1-204ENST00000539241 PRRT2Q7Z6L0 340 aaPredicted RBP17.21■□□□□ 0.35
CCND1-204ENST00000539241 SH3TC2Q8TF17 1288 aa17.21■□□□□ 0.35
CCND1-204ENST00000539241 RAI14Q9P0K7 980 aa17.21■□□□□ 0.35
CCND1-204ENST00000539241 AFG3L2Q9Y4W6 797 aa17.21■□□□□ 0.35
CCND1-204ENST00000539241 CTNND1O60716 968 aaKnown RBP17.2■□□□□ 0.34
CCND1-204ENST00000539241 NPM3O75607 178 aaKnown RBP17.2■□□□□ 0.34
CCND1-204ENST00000539241 MYCP01106 439 aaPredicted RBP17.2■□□□□ 0.34
CCND1-204ENST00000539241 CTGFP29279 349 aa17.2■□□□□ 0.34
CCND1-204ENST00000539241 POLA2Q14181 598 aa17.2■□□□□ 0.34
CCND1-204ENST00000539241 FASTKD5Q7L8L6 764 aaKnown RBP17.2■□□□□ 0.34
CCND1-204ENST00000539241 TRIM47Q96LD4 638 aa17.2■□□□□ 0.34
CCND1-204ENST00000539241 SRRDQ9UH36 339 aa17.2■□□□□ 0.34
CCND1-204ENST00000539241 MYH2Q9UKX2 1941 aa17.19■□□□□ 0.34
CCND1-204ENST00000539241 FMNL1O95466 1100 aaPredicted RBP17.19■□□□□ 0.34
CCND1-204ENST00000539241 MAP4K4O95819 1239 aaPredicted RBP17.19■□□□□ 0.34
CCND1-204ENST00000539241 CYP2C8P10632 490 aa17.19■□□□□ 0.34
CCND1-204ENST00000539241 HOXD10P28358 340 aa17.19■□□□□ 0.34
CCND1-204ENST00000539241 GADL1Q6ZQY3 521 aa17.19■□□□□ 0.34
CCND1-204ENST00000539241 GPR108Q9NPR9 543 aa17.19■□□□□ 0.34
CCND1-204ENST00000539241 AK9Q5TCS8 1911 aa17.19■□□□□ 0.34
CCND1-204ENST00000539241 TBC1D12O60347 775 aa17.18■□□□□ 0.34
CCND1-204ENST00000539241 BCRP11274 1271 aa17.18■□□□□ 0.34
CCND1-204ENST00000539241 OSBPP22059 807 aa17.18■□□□□ 0.34
CCND1-204ENST00000539241 ATP8B2P98198 1209 aa17.18■□□□□ 0.34
CCND1-204ENST00000539241 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
CCND1-204ENST00000539241 TNNI3KQ59H18 835 aa17.18■□□□□ 0.34
CCND1-204ENST00000539241 TTC39AQ5SRH9 613 aa17.18■□□□□ 0.34
CCND1-204ENST00000539241 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
CCND1-204ENST00000539241 SSH3Q8TE77 659 aa17.18■□□□□ 0.34
CCND1-204ENST00000539241 OSBPL5Q9H0X9 879 aaPredicted RBP17.18■□□□□ 0.34
CCND1-204ENST00000539241 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.18■□□□□ 0.34
CCND1-204ENST00000539241 LRP2BPQ9P2M1 347 aa17.18■□□□□ 0.34
CCND1-204ENST00000539241 FPGT-TNNI3KV9GXZ4 949 aa17.18■□□□□ 0.34
CCND1-204ENST00000539241 TRIM75PA6NK02 468 aa17.17■□□□□ 0.34
CCND1-204ENST00000539241 FAM196BA6NMK8 535 aa17.17■□□□□ 0.34
CCND1-204ENST00000539241 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
CCND1-204ENST00000539241 TEX11Q8IYF3 940 aa17.17■□□□□ 0.34
CCND1-204ENST00000539241 RAET1EQ8TD07 263 aa17.17■□□□□ 0.34
CCND1-204ENST00000539241 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
CCND1-204ENST00000539241 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
CCND1-204ENST00000539241 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.17■□□□□ 0.34
CCND1-204ENST00000539241 SLC45A1Q9Y2W3 748 aa17.17■□□□□ 0.34
CCND1-204ENST00000539241 MYPNQ86TC9 1320 aa17.17■□□□□ 0.34
CCND1-204ENST00000539241 SURF6O75683 361 aaKnown RBP17.16■□□□□ 0.34
CCND1-204ENST00000539241 CCDC158Q5M9N0 1113 aa17.16■□□□□ 0.34
CCND1-204ENST00000539241 ITPRIPQ8IWB1 547 aa17.16■□□□□ 0.34
CCND1-204ENST00000539241 GCC1Q96CN9 775 aa17.16■□□□□ 0.34
CCND1-204ENST00000539241 NOL10Q9BSC4 688 aaKnown RBP17.16■□□□□ 0.34
CCND1-204ENST00000539241 SNRKQ9NRH2 765 aa17.16■□□□□ 0.34
CCND1-204ENST00000539241 ZSWIM8A7E2V4 1837 aa17.16■□□□□ 0.34
CCND1-204ENST00000539241 DOCK2Q92608 1830 aa17.16■□□□□ 0.34
CCND1-204ENST00000539241 MS4A1P11836 297 aa17.15■□□□□ 0.34
CCND1-204ENST00000539241 FCGRTP55899 365 aa17.15■□□□□ 0.34
CCND1-204ENST00000539241 NAA16Q6N069 864 aaPredicted RBP17.15■□□□□ 0.34
CCND1-204ENST00000539241 COL2A1P02458 1487 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms