RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 COL1A1P02452 1464 aaPredicted RBP20.8■□□□□ 0.92
GNE-204ENST00000539208 GTF2E1P29083 439 aaPredicted RBP20.8■□□□□ 0.92
GNE-204ENST00000539208 SSRP1Q08945 709 aaKnown RBP20.8■□□□□ 0.92
GNE-204ENST00000539208 ADGRA1Q86SQ6 560 aa20.8■□□□□ 0.92
GNE-204ENST00000539208 FAM84BQ96KN1 310 aaPredicted RBP20.8■□□□□ 0.92
GNE-204ENST00000539208 RAI14Q9P0K7 980 aa20.8■□□□□ 0.92
GNE-204ENST00000539208 PDS5AQ29RF7 1337 aaKnown RBP20.8■□□□□ 0.92
GNE-204ENST00000539208 ECM29Q5VYK3 1845 aa20.8■□□□□ 0.92
GNE-204ENST00000539208 CMA1P23946 247 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 ZNF75DP51815 510 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 NDUFA8P51970 172 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 TRIM29Q14134 588 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 WTAPQ15007 396 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 AXDND1Q5T1B0 1012 aaPredicted RBP20.79■□□□□ 0.92
GNE-204ENST00000539208 FBXO33Q7Z6M2 555 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 FNBP4Q8N3X1 1017 aaPredicted RBP20.79■□□□□ 0.92
GNE-204ENST00000539208 MPNDQ8N594 471 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 RIOK1Q9BRS2 568 aaKnown RBP20.79■□□□□ 0.92
GNE-204ENST00000539208 ABCF2Q9UG63 623 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 CACNA1SQ13698 1873 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 A0A1B0GVL5 298 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 ERICH2A1L162 156 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 SARM1Q6SZW1 724 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 CELF1Q92879 486 aaKnown RBP20.79■□□□□ 0.92
GNE-204ENST00000539208 C8orf37Q96NL8 207 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 SETDB2Q96T68 719 aa20.79■□□□□ 0.92
GNE-204ENST00000539208 IQSEC3Q9UPP2 1182 aaPredicted RBP20.79■□□□□ 0.92
GNE-204ENST00000539208 ZBTB22O15209 634 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 PPP6R2O75170 966 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 NOLC1Q14978 699 aaKnown RBP eCLIP20.78■□□□□ 0.92
GNE-204ENST00000539208 C11orf57Q6ZUT1 292 aaPredicted RBP20.78■□□□□ 0.92
GNE-204ENST00000539208 CCDC144CPQ8IYA2 1237 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 NLRP3Q96P20 1036 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 MYL10Q9BUA6 226 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 SPTLC3Q9NUV7 552 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 TAF1P21675 1872 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 CCDC196A0A1B0GTZ2 297 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 KCNQ4P56696 695 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 RPS8P62241 208 aaKnown RBP20.78■□□□□ 0.92
GNE-204ENST00000539208 BICDL1Q6ZP65 573 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 SDF4Q9BRK5 362 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 BRIP1Q9BX63 1249 aa20.78■□□□□ 0.92
GNE-204ENST00000539208 GOLGA6L19H0YKK7 550 aa20.77■□□□□ 0.92
GNE-204ENST00000539208 CDC25BP30305 580 aa20.77■□□□□ 0.92
GNE-204ENST00000539208 RRP12Q5JTH9 1297 aaKnown RBP20.77■□□□□ 0.92
GNE-204ENST00000539208 JMYQ8N9B5 988 aa20.77■□□□□ 0.92
GNE-204ENST00000539208 TRIM5Q9C035 493 aa20.77■□□□□ 0.92
GNE-204ENST00000539208 BTAF1O14981 1849 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 WTIPA6NIX2 430 aaPredicted RBP20.76■□□□□ 0.91
GNE-204ENST00000539208 PPP2R5BQ15173 497 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 TMED8Q6PL24 325 aaPredicted RBP20.76■□□□□ 0.91
GNE-204ENST00000539208 SPC24Q8NBT2 197 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.76■□□□□ 0.91
GNE-204ENST00000539208 SLC26A6Q9BXS9 759 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 ANKRD2Q9GZV1 360 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 KCNF1Q9H3M0 494 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 R3HCC1Q9Y3T6 440 aaKnown RBP20.76■□□□□ 0.91
GNE-204ENST00000539208 NHSQ6T4R5 1651 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 ZPR1O75312 459 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 PTPAQ15257 358 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 RTN1Q16799 776 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 PTF1AQ7RTS3 328 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 ESR2Q92731 530 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 MAP3K14Q99558 947 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 NAT10Q9H0A0 1025 aaKnown RBP20.76■□□□□ 0.91
GNE-204ENST00000539208 TOMM22Q9NS69 142 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 KIAA1468Q9P260 1216 aa20.76■□□□□ 0.91
GNE-204ENST00000539208 PCP11498 1178 aaKnown RBP20.75■□□□□ 0.91
GNE-204ENST00000539208 GNL2Q13823 731 aaKnown RBP20.75■□□□□ 0.91
GNE-204ENST00000539208 TPTE2Q6XPS3 522 aa20.75■□□□□ 0.91
GNE-204ENST00000539208 NBPF5PQ86XG9 351 aaPredicted RBP20.75■□□□□ 0.91
GNE-204ENST00000539208 TRIM22Q8IYM9 498 aa20.75■□□□□ 0.91
GNE-204ENST00000539208 KIAA1524Q8TCG1 905 aa20.75■□□□□ 0.91
GNE-204ENST00000539208 SDR42E1Q8WUS8 393 aa20.75■□□□□ 0.91
GNE-204ENST00000539208 TIGD1Q96MW7 591 aa20.75■□□□□ 0.91
GNE-204ENST00000539208 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.75■□□□□ 0.91
GNE-204ENST00000539208 THSD7AQ9UPZ6 1657 aa20.75■□□□□ 0.91
GNE-204ENST00000539208 FAM237AA0A1B0GTK4 181 aa20.75■□□□□ 0.91
GNE-204ENST00000539208 ZNF202O95125 648 aa20.75■□□□□ 0.91
GNE-204ENST00000539208 NBPF11Q86T75 865 aa20.75■□□□□ 0.91
GNE-204ENST00000539208 CEP57L1Q8IYX8 460 aa20.75■□□□□ 0.91
GNE-204ENST00000539208 WDHD1O75717 1129 aaPredicted RBP20.74■□□□□ 0.91
GNE-204ENST00000539208 FGRP09769 529 aa20.74■□□□□ 0.91
GNE-204ENST00000539208 SEC23AQ15436 765 aa20.74■□□□□ 0.91
GNE-204ENST00000539208 ZKSCAN3Q9BRR0 538 aa20.74■□□□□ 0.91
GNE-204ENST00000539208 UBAC1Q9BSL1 405 aa20.74■□□□□ 0.91
GNE-204ENST00000539208 SRP68Q9UHB9 627 aaKnown RBP20.74■□□□□ 0.91
GNE-204ENST00000539208 PFKFB1P16118 471 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 DHX40Q8IX18 779 aaKnown RBP20.73■□□□□ 0.91
GNE-204ENST00000539208 ZNF654Q8IZM8 581 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 CRACR2BQ8N4Y2 399 aaPredicted RBP20.73■□□□□ 0.91
GNE-204ENST00000539208 FANCBQ8NB91 859 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 ZNF384Q8TF68 577 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 MRFAP1L1Q96HT8 127 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 BPIFA3Q9BQP9 254 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 MINDY4BA8MYZ0 360 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 GNPATO15228 680 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 DEXIO95424 95 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 MMP1P03956 469 aa20.73■□□□□ 0.91
GNE-204ENST00000539208 RBM6P78332 1123 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms