RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 SOGA3Q5TF21 947 aa23.86■■□□□ 1.41
CDH5-202ENST00000539168 RTKN2Q8IZC4 609 aa23.86■■□□□ 1.41
CDH5-202ENST00000539168 FAM184AQ8NB25 1140 aa23.86■■□□□ 1.41
CDH5-202ENST00000539168 IGDCC4Q8TDY8 1250 aa23.86■■□□□ 1.41
CDH5-202ENST00000539168 PDGFDQ9GZP0 370 aaPredicted RBP23.86■■□□□ 1.41
CDH5-202ENST00000539168 NAP1L2Q9ULW6 460 aaPredicted RBP23.86■■□□□ 1.41
CDH5-202ENST00000539168 KIF13BQ9NQT8 1826 aa23.85■■□□□ 1.41
CDH5-202ENST00000539168 LAMB1P07942 1786 aa23.85■■□□□ 1.41
CDH5-202ENST00000539168 IFIT3O14879 490 aaKnown RBP23.85■■□□□ 1.41
CDH5-202ENST00000539168 RCAN1P53805 252 aa23.85■■□□□ 1.41
CDH5-202ENST00000539168 PDE4BQ07343 736 aa23.85■■□□□ 1.41
CDH5-202ENST00000539168 DIXDC1Q155Q3 683 aa23.85■■□□□ 1.41
CDH5-202ENST00000539168 OLFM4Q6UX06 510 aa23.85■■□□□ 1.41
CDH5-202ENST00000539168 SYNE3Q6ZMZ3 975 aa23.85■■□□□ 1.41
CDH5-202ENST00000539168 MTFR1LQ9H019 292 aa23.85■■□□□ 1.41
CDH5-202ENST00000539168 GOLGA8BA8MQT2 603 aa23.84■■□□□ 1.41
CDH5-202ENST00000539168 ORC4O43929 436 aa23.84■■□□□ 1.41
CDH5-202ENST00000539168 BTDP43251 543 aa23.84■■□□□ 1.41
CDH5-202ENST00000539168 TGFB2P61812 414 aa23.84■■□□□ 1.41
CDH5-202ENST00000539168 CCDC93Q567U6 631 aa23.84■■□□□ 1.41
CDH5-202ENST00000539168 CPLX2Q6PUV4 134 aaKnown RBP23.84■■□□□ 1.41
CDH5-202ENST00000539168 RGS22Q8NE09 1264 aa23.84■■□□□ 1.41
CDH5-202ENST00000539168 NSUN7Q8NE18 718 aaKnown RBP23.84■■□□□ 1.41
CDH5-202ENST00000539168 F13A1P00488 732 aa23.83■■□□□ 1.41
CDH5-202ENST00000539168 GRIK5Q16478 980 aa23.83■■□□□ 1.41
CDH5-202ENST00000539168 RRP12Q5JTH9 1297 aaKnown RBP23.83■■□□□ 1.41
CDH5-202ENST00000539168 STRIP1Q5VSL9 837 aa23.83■■□□□ 1.41
CDH5-202ENST00000539168 UBAC1Q9BSL1 405 aa23.83■■□□□ 1.41
CDH5-202ENST00000539168 MRIQ9BWK5 157 aa23.83■■□□□ 1.41
CDH5-202ENST00000539168 VPS33BQ9H267 617 aa23.83■■□□□ 1.41
CDH5-202ENST00000539168 MKRN1Q9UHC7 482 aaKnown RBP23.83■■□□□ 1.41
CDH5-202ENST00000539168 MTMR6Q9Y217 621 aa23.83■■□□□ 1.41
CDH5-202ENST00000539168 CCDC69A6NI79 296 aa23.83■■□□□ 1.4
CDH5-202ENST00000539168 CDKL5O76039 1030 aa23.83■■□□□ 1.4
CDH5-202ENST00000539168 KIAA2012Q0VF49 1180 aa23.83■■□□□ 1.4
CDH5-202ENST00000539168 DOK7Q18PE1 504 aa23.83■■□□□ 1.4
CDH5-202ENST00000539168 NFXL1Q6ZNB6 911 aa23.83■■□□□ 1.4
CDH5-202ENST00000539168 LY9Q9HBG7 655 aa23.83■■□□□ 1.4
CDH5-202ENST00000539168 MCM9Q9NXL9 1143 aa23.83■■□□□ 1.4
CDH5-202ENST00000539168 BRPF3Q9ULD4 1205 aa23.83■■□□□ 1.4
CDH5-202ENST00000539168 SNED1Q8TER0 1413 aa23.82■■□□□ 1.4
CDH5-202ENST00000539168 BAZ2AQ9UIF9 1905 aaKnown RBP23.82■■□□□ 1.4
CDH5-202ENST00000539168 CPLX1O14810 134 aa23.82■■□□□ 1.4
CDH5-202ENST00000539168 CCT2P78371 535 aaKnown RBP23.82■■□□□ 1.4
CDH5-202ENST00000539168 WTAPQ15007 396 aa23.82■■□□□ 1.4
CDH5-202ENST00000539168 MCTP1Q6DN14 999 aa23.82■■□□□ 1.4
CDH5-202ENST00000539168 IQCA1Q86XH1 822 aa23.82■■□□□ 1.4
CDH5-202ENST00000539168 SH3RF3Q8TEJ3 882 aaPredicted RBP23.82■■□□□ 1.4
CDH5-202ENST00000539168 FBXW7Q969H0 707 aa23.82■■□□□ 1.4
CDH5-202ENST00000539168 ZNF287Q9HBT7 754 aa23.82■■□□□ 1.4
CDH5-202ENST00000539168 TRAK2O60296 914 aa23.81■■□□□ 1.4
CDH5-202ENST00000539168 PPP2R5BQ15173 497 aa23.81■■□□□ 1.4
CDH5-202ENST00000539168 HHIPL2Q6UWX4 724 aa23.81■■□□□ 1.4
CDH5-202ENST00000539168 PSMD1Q99460 953 aa23.81■■□□□ 1.4
CDH5-202ENST00000539168 SLC12A7Q9Y666 1083 aa23.81■■□□□ 1.4
CDH5-202ENST00000539168 PTPDC1A2A3K4 754 aa23.8■■□□□ 1.4
CDH5-202ENST00000539168 ZBTB43O43298 467 aa23.8■■□□□ 1.4
CDH5-202ENST00000539168 METAP2P50579 478 aaKnown RBP eCLIP23.8■■□□□ 1.4
CDH5-202ENST00000539168 C12orf60Q5U649 245 aa23.8■■□□□ 1.4
CDH5-202ENST00000539168 APOA5Q6Q788 366 aa23.8■■□□□ 1.4
CDH5-202ENST00000539168 TEX11Q8IYF3 940 aa23.8■■□□□ 1.4
CDH5-202ENST00000539168 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.8■■□□□ 1.4
CDH5-202ENST00000539168 ROBO3Q96MS0 1386 aa23.8■■□□□ 1.4
CDH5-202ENST00000539168 VPS37CA5D8V6 355 aaPredicted RBP23.79■■□□□ 1.4
CDH5-202ENST00000539168 HDLBPQ00341 1268 aaKnown RBP23.79■■□□□ 1.4
CDH5-202ENST00000539168 CSPP1Q1MSJ5 1256 aa23.79■■□□□ 1.4
CDH5-202ENST00000539168 GPHNQ9NQX3 736 aaPredicted RBP23.79■■□□□ 1.4
CDH5-202ENST00000539168 TTF2Q9UNY4 1162 aaKnown RBP23.79■■□□□ 1.4
CDH5-202ENST00000539168 HPS5Q9UPZ3 1129 aa23.79■■□□□ 1.4
CDH5-202ENST00000539168 TACC3Q9Y6A5 838 aa23.79■■□□□ 1.4
CDH5-202ENST00000539168 NID2Q14112 1375 aa23.79■■□□□ 1.4
CDH5-202ENST00000539168 ECE2O60344 883 aa23.79■■□□□ 1.4
CDH5-202ENST00000539168 JAK2O60674 1132 aa23.79■■□□□ 1.4
CDH5-202ENST00000539168 CCDC178Q5BJE1 867 aa23.79■■□□□ 1.4
CDH5-202ENST00000539168 FOXD4L5Q5VV16 416 aaPredicted RBP23.79■■□□□ 1.4
CDH5-202ENST00000539168 TGFBRAP1Q8WUH2 860 aa23.79■■□□□ 1.4
CDH5-202ENST00000539168 FOXD4L4Q8WXT5 416 aaPredicted RBP23.79■■□□□ 1.4
CDH5-202ENST00000539168 NAV1Q8NEY1 1877 aa23.78■■□□□ 1.4
CDH5-202ENST00000539168 CCDC196A0A1B0GTZ2 297 aa23.78■■□□□ 1.4
CDH5-202ENST00000539168 H3BQV1 296 aa23.78■■□□□ 1.4
CDH5-202ENST00000539168 CTDNEP1O95476 244 aa23.78■■□□□ 1.4
CDH5-202ENST00000539168 DPEP1P16444 411 aa23.78■■□□□ 1.4
CDH5-202ENST00000539168 IFFO2Q5TF58 517 aa23.78■■□□□ 1.4
CDH5-202ENST00000539168 TEKT1Q969V4 418 aa23.78■■□□□ 1.4
CDH5-202ENST00000539168 DBNDD1Q9H9R9 158 aa23.78■■□□□ 1.4
CDH5-202ENST00000539168 INCENPQ9NQS7 918 aa23.78■■□□□ 1.4
CDH5-202ENST00000539168 DAGLAQ9Y4D2 1042 aa23.78■■□□□ 1.4
CDH5-202ENST00000539168 USP17L3A6NCW0 530 aa23.77■■□□□ 1.4
CDH5-202ENST00000539168 USP17L4A6NCW7 530 aa23.77■■□□□ 1.4
CDH5-202ENST00000539168 C21orf2O43822 256 aa23.77■■□□□ 1.4
CDH5-202ENST00000539168 USP17L1Q7RTZ2 530 aa23.77■■□□□ 1.4
CDH5-202ENST00000539168 ZNF219Q9P2Y4 722 aaPredicted RBP23.77■■□□□ 1.4
CDH5-202ENST00000539168 RANBP6O60518 1105 aaKnown RBP23.76■■□□□ 1.39
CDH5-202ENST00000539168 POLR3DP05423 398 aaPredicted RBP23.76■■□□□ 1.39
CDH5-202ENST00000539168 RHBDL3P58872 404 aa23.76■■□□□ 1.39
CDH5-202ENST00000539168 CERS5Q8N5B7 392 aa23.76■■□□□ 1.39
CDH5-202ENST00000539168 ZSCAN10Q96SZ4 725 aaPredicted RBP23.76■■□□□ 1.39
CDH5-202ENST00000539168 ZSCAN16Q9H4T2 348 aaPredicted RBP23.76■■□□□ 1.39
CDH5-202ENST00000539168 NCOA5Q9HCD5 579 aaKnown RBP23.76■■□□□ 1.39
CDH5-202ENST00000539168 PIM2Q9P1W9 311 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms