RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 HEG1Q9ULI3 1381 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 GPR25O00155 361 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 NFKBIEO00221 500 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 EPHA4P54764 986 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 TBC1D9BQ66K14 1250 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 ZNF790Q6PG37 636 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 CLEC4GQ6UXB4 293 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 PGBD3Q8N328 593 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 OGFOD1Q8N543 542 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 CNBD1Q8NA66 436 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 C1orf216Q8TAB5 229 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 MASTLQ96GX5 879 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 TRERF1Q96PN7 1200 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 FMNL2Q96PY5 1086 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 PCGF6Q9BYE7 350 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 ZNF652Q9Y2D9 606 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 USP3Q9Y6I4 520 aa7.12□□□□□ -1.27
SNHG1-207ENST00000537965 BCORQ6W2J9 1755 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 COL11A2P13942 1736 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-207ENST00000537965 SRGNP10124 158 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 FOXK2Q01167 660 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 SRSF11Q05519 484 aaKnown RBP7.11□□□□□ -1.27
SNHG1-207ENST00000537965 PRR5LQ6MZQ0 368 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 LDHDQ86WU2 507 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 SIX5Q8N196 739 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 AIDAQ96BJ3 306 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 ZNF496Q96IT1 587 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-207ENST00000537965 CRISPLD1Q9H336 500 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 RUBCNLQ9H714 662 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 PRDM10Q9NQV6 1147 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 NUP98P52948 1817 aa7.11□□□□□ -1.27
SNHG1-207ENST00000537965 TMEM88BA6NKF7 163 aa7.1□□□□□ -1.27
SNHG1-207ENST00000537965 M0R2N6 131 aa7.1□□□□□ -1.27
SNHG1-207ENST00000537965 DDNO94850 711 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-207ENST00000537965 DKK1O94907 266 aa7.1□□□□□ -1.27
SNHG1-207ENST00000537965 ALDH1B1P30837 517 aa7.1□□□□□ -1.27
SNHG1-207ENST00000537965 UBAP2LQ14157 1087 aaKnown RBP7.1□□□□□ -1.27
SNHG1-207ENST00000537965 CCDC93Q567U6 631 aa7.1□□□□□ -1.27
SNHG1-207ENST00000537965 EFHC2Q5JST6 749 aa7.1□□□□□ -1.27
SNHG1-207ENST00000537965 TPTE2Q6XPS3 522 aa7.1□□□□□ -1.27
SNHG1-207ENST00000537965 PNMA8AQ86V59 439 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-207ENST00000537965 RTKN2Q8IZC4 609 aa7.1□□□□□ -1.27
SNHG1-207ENST00000537965 CFHR5Q9BXR6 569 aa7.1□□□□□ -1.27
SNHG1-207ENST00000537965 MBIPQ9NS73 344 aa7.1□□□□□ -1.27
SNHG1-207ENST00000537965 BTBD11A6QL63 1104 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 U2SURPO15042 1029 aaKnown RBP7.09□□□□□ -1.27
SNHG1-207ENST00000537965 CAMTA2O94983 1202 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 NPR1P16066 1061 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 ATP4AP20648 1035 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 RASA1P20936 1047 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 CTCFP49711 727 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-207ENST00000537965 PRPF40BQ6NWY9 871 aaKnown RBP7.09□□□□□ -1.27
SNHG1-207ENST00000537965 NBPF5PQ86XG9 351 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-207ENST00000537965 IL17REQ8NFR9 667 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 CFAP53Q96M91 514 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 ZMYND15Q9H091 742 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 ZDHHC3Q9NYG2 299 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 NUDCQ9Y266 331 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 GTF3C3Q9Y5Q9 886 aa7.09□□□□□ -1.27
SNHG1-207ENST00000537965 CNTNAP1P78357 1384 aa7.08□□□□□ -1.28
SNHG1-207ENST00000537965 NPC1L1Q9UHC9 1359 aa7.08□□□□□ -1.28
SNHG1-207ENST00000537965 POLR2AP24928 1970 aaKnown RBP7.08□□□□□ -1.28
SNHG1-207ENST00000537965 A1BGP04217 495 aa7.08□□□□□ -1.28
SNHG1-207ENST00000537965 SNRPA1P09661 255 aaKnown RBP7.08□□□□□ -1.28
SNHG1-207ENST00000537965 LMOD1P29536 600 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-207ENST00000537965 FKBP4Q02790 459 aaKnown RBP eCLIP7.08□□□□□ -1.28
SNHG1-207ENST00000537965 TEAD4Q15561 434 aa7.08□□□□□ -1.28
SNHG1-207ENST00000537965 ZNF385CQ66K41 422 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-207ENST00000537965 SLC9A9Q8IVB4 645 aa7.08□□□□□ -1.28
SNHG1-207ENST00000537965 JDP2Q8WYK2 163 aa7.08□□□□□ -1.28
SNHG1-207ENST00000537965 RTF1Q92541 710 aaKnown RBP7.08□□□□□ -1.28
SNHG1-207ENST00000537965 ZNF594Q96JF6 807 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-207ENST00000537965 TAF1DQ9H5J8 278 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-207ENST00000537965 HACL1Q9UJ83 578 aa7.08□□□□□ -1.28
SNHG1-207ENST00000537965 PASKQ96RG2 1323 aa7.07□□□□□ -1.28
SNHG1-207ENST00000537965 KLRG2A4D1S0 409 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-207ENST00000537965 MAP2K1Q02750 393 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-207ENST00000537965 DEFB115Q30KQ5 88 aa7.07□□□□□ -1.28
SNHG1-207ENST00000537965 EAPPQ56P03 285 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-207ENST00000537965 CC2D1BQ5T0F9 858 aaKnown RBP7.07□□□□□ -1.28
SNHG1-207ENST00000537965 NLRP8Q86W28 1048 aa7.07□□□□□ -1.28
SNHG1-207ENST00000537965 WHAMMQ8TF30 809 aa7.07□□□□□ -1.28
SNHG1-207ENST00000537965 ZDHHC1Q8WTX9 485 aa7.07□□□□□ -1.28
SNHG1-207ENST00000537965 C7orf43Q8WVR3 580 aa7.07□□□□□ -1.28
SNHG1-207ENST00000537965 NYXQ9GZU5 481 aa7.07□□□□□ -1.28
SNHG1-207ENST00000537965 PHF24Q9UPV7 400 aa7.07□□□□□ -1.28
SNHG1-207ENST00000537965 RBM19Q9Y4C8 960 aaKnown RBP7.07□□□□□ -1.28
SNHG1-207ENST00000537965 DLG5Q8TDM6 1919 aa7.07□□□□□ -1.28
SNHG1-207ENST00000537965 CEMIPQ8WUJ3 1361 aa7.07□□□□□ -1.28
SNHG1-207ENST00000537965 KIF7Q2M1P5 1343 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 CASP8AP2Q9UKL3 1982 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 SFI1A8K8P3 1242 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 FOXN1O15353 648 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 HTATSF1O43719 755 aaKnown RBP7.06□□□□□ -1.28
SNHG1-207ENST00000537965 NEFMP07197 916 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 MX2P20592 715 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 EPHX2P34913 555 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 NOS2P35228 1153 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 SEC13P55735 322 aa7.06□□□□□ -1.28
SNHG1-207ENST00000537965 EIF6P56537 245 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms