RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 INHBEP58166 350 aa28.55■■■□□ 2.16
VPS37B-203ENST00000535765 OPTNQ96CV9 577 aa28.55■■■□□ 2.16
VPS37B-203ENST00000535765 WRNIP1Q96S55 665 aa28.55■■■□□ 2.16
VPS37B-203ENST00000535765 NOL10Q9BSC4 688 aaKnown RBP28.55■■■□□ 2.16
VPS37B-203ENST00000535765 FOCADQ5VW36 1801 aa28.55■■■□□ 2.16
VPS37B-203ENST00000535765 CAPN15O75808 1086 aa28.54■■■□□ 2.16
VPS37B-203ENST00000535765 PLCG2P16885 1265 aa28.54■■■□□ 2.16
VPS37B-203ENST00000535765 MAP3K12Q12852 859 aa28.54■■■□□ 2.16
VPS37B-203ENST00000535765 MIGA2Q7L4E1 593 aa28.54■■■□□ 2.16
VPS37B-203ENST00000535765 GJA5P36382 358 aa28.53■■■□□ 2.16
VPS37B-203ENST00000535765 CERS3Q8IU89 383 aa28.53■■■□□ 2.16
VPS37B-203ENST00000535765 ZNF341Q9BYN7 854 aa28.53■■■□□ 2.16
VPS37B-203ENST00000535765 ANTXR1Q9H6X2 564 aa28.53■■■□□ 2.16
VPS37B-203ENST00000535765 IDH1O75874 414 aaKnown RBP28.52■■■□□ 2.16
VPS37B-203ENST00000535765 TBC1D8O95759 1140 aa28.52■■■□□ 2.16
VPS37B-203ENST00000535765 HDAC1Q13547 482 aaPredicted RBP28.52■■■□□ 2.16
VPS37B-203ENST00000535765 ZFPM1Q8IX07 1006 aa28.52■■■□□ 2.16
VPS37B-203ENST00000535765 NDUFB9Q9Y6M9 179 aa28.52■■■□□ 2.16
VPS37B-203ENST00000535765 COL2A1P02458 1487 aaPredicted RBP28.52■■■□□ 2.16
VPS37B-203ENST00000535765 SMARCA5O60264 1052 aaPredicted RBP28.51■■■□□ 2.15
VPS37B-203ENST00000535765 MAP3K10Q02779 954 aa28.51■■■□□ 2.15
VPS37B-203ENST00000535765 DDX4Q9NQI0 724 aaKnown RBP28.51■■■□□ 2.15
VPS37B-203ENST00000535765 ZNF112Q9UJU3 913 aa28.51■■■□□ 2.15
VPS37B-203ENST00000535765 SUPT16HQ9Y5B9 1047 aaKnown RBP28.51■■■□□ 2.15
VPS37B-203ENST00000535765 ATRNL1Q5VV63 1379 aa28.5■■■□□ 2.15
VPS37B-203ENST00000535765 MYH7P12883 1935 aa28.5■■■□□ 2.15
VPS37B-203ENST00000535765 ALDH1A1P00352 501 aa28.5■■■□□ 2.15
VPS37B-203ENST00000535765 PICALMQ13492 652 aa28.5■■■□□ 2.15
VPS37B-203ENST00000535765 ADGRA1Q86SQ6 560 aa28.5■■■□□ 2.15
VPS37B-203ENST00000535765 ZSCAN29Q8IWY8 852 aaPredicted RBP28.5■■■□□ 2.15
VPS37B-203ENST00000535765 CNKSR2Q8WXI2 1034 aa28.5■■■□□ 2.15
VPS37B-203ENST00000535765 ZKSCAN4Q969J2 545 aaPredicted RBP28.5■■■□□ 2.15
VPS37B-203ENST00000535765 BCL11AQ9H165 835 aa28.5■■■□□ 2.15
VPS37B-203ENST00000535765 CYP7A1P22680 504 aa28.49■■■□□ 2.15
VPS37B-203ENST00000535765 IFNL1Q8IU54 200 aa28.49■■■□□ 2.15
VPS37B-203ENST00000535765 OTUD5Q96G74 571 aa28.49■■■□□ 2.15
VPS37B-203ENST00000535765 HAUS7Q99871 368 aa28.49■■■□□ 2.15
VPS37B-203ENST00000535765 AATFQ9NY61 560 aaKnown RBP eCLIP28.49■■■□□ 2.15
VPS37B-203ENST00000535765 SH3BP5LQ7L8J4 393 aa28.48■■■□□ 2.15
VPS37B-203ENST00000535765 TEX11Q8IYF3 940 aa28.48■■■□□ 2.15
VPS37B-203ENST00000535765 MAGEB6Q8N7X4 407 aa28.48■■■□□ 2.15
VPS37B-203ENST00000535765 GCC1Q96CN9 775 aa28.48■■■□□ 2.15
VPS37B-203ENST00000535765 SNCAIPQ9Y6H5 919 aa28.48■■■□□ 2.15
VPS37B-203ENST00000535765 SPDYE5A6NIY4 337 aa28.47■■■□□ 2.15
VPS37B-203ENST00000535765 ERO1BQ86YB8 467 aa28.47■■■□□ 2.15
VPS37B-203ENST00000535765 SH3RF3Q8TEJ3 882 aaPredicted RBP28.47■■■□□ 2.15
VPS37B-203ENST00000535765 BOLA2Q9H3K6 86 aa28.47■■■□□ 2.15
VPS37B-203ENST00000535765 ECHDC1Q9NTX5 307 aa28.47■■■□□ 2.15
VPS37B-203ENST00000535765 PAG1Q9NWQ8 432 aa28.47■■■□□ 2.15
VPS37B-203ENST00000535765 DDTLA6NHG4 134 aaPredicted RBP28.46■■■□□ 2.15
VPS37B-203ENST00000535765 IGF2BP3O00425 579 aaKnown RBP eCLIP28.46■■■□□ 2.15
VPS37B-203ENST00000535765 GOLIM4O00461 696 aa28.46■■■□□ 2.15
VPS37B-203ENST00000535765 INPP5BP32019 993 aa28.46■■■□□ 2.15
VPS37B-203ENST00000535765 OTUD7BQ6GQQ9 843 aa28.46■■■□□ 2.15
VPS37B-203ENST00000535765 GPATCH3Q96I76 525 aa28.46■■■□□ 2.15
VPS37B-203ENST00000535765 DNAJC2Q99543 621 aaKnown RBP28.46■■■□□ 2.15
VPS37B-203ENST00000535765 TBC1D12O60347 775 aa28.45■■■□□ 2.14
VPS37B-203ENST00000535765 GTF2A2P52657 109 aa28.45■■■□□ 2.14
VPS37B-203ENST00000535765 DGKZQ13574 1117 aa28.45■■■□□ 2.14
VPS37B-203ENST00000535765 ABHD8Q96I13 439 aa28.45■■■□□ 2.14
VPS37B-203ENST00000535765 OSBPL5Q9H0X9 879 aaPredicted RBP28.45■■■□□ 2.14
VPS37B-203ENST00000535765 CFHR5Q9BXR6 569 aa28.44■■■□□ 2.14
VPS37B-203ENST00000535765 MYH1P12882 1939 aa28.43■■■□□ 2.14
VPS37B-203ENST00000535765 TESPA1A2RU30 521 aaPredicted RBP28.43■■■□□ 2.14
VPS37B-203ENST00000535765 GPR25O00155 361 aa28.43■■■□□ 2.14
VPS37B-203ENST00000535765 SLC9C2Q5TAH2 1124 aa28.43■■■□□ 2.14
VPS37B-203ENST00000535765 EXOC6Q8TAG9 804 aa28.43■■■□□ 2.14
VPS37B-203ENST00000535765 ZNF296Q8WUU4 475 aaPredicted RBP28.43■■■□□ 2.14
VPS37B-203ENST00000535765 MS4A4AQ96JQ5 239 aa28.43■■■□□ 2.14
VPS37B-203ENST00000535765 MCOLN1Q9GZU1 580 aa28.43■■■□□ 2.14
VPS37B-203ENST00000535765 DHX36Q9H2U1 1008 aaKnown RBP28.43■■■□□ 2.14
VPS37B-203ENST00000535765 CASP8AP2Q9UKL3 1982 aa28.42■■■□□ 2.14
VPS37B-203ENST00000535765 CCL15-CCL14A0A0B4J2E2 113 aa28.42■■■□□ 2.14
VPS37B-203ENST00000535765 PDE6AP16499 860 aa28.42■■■□□ 2.14
VPS37B-203ENST00000535765 CCL15Q16663 113 aa28.42■■■□□ 2.14
VPS37B-203ENST00000535765 NOL9Q5SY16 702 aaKnown RBP28.42■■■□□ 2.14
VPS37B-203ENST00000535765 PTPN18Q99952 460 aa28.42■■■□□ 2.14
VPS37B-203ENST00000535765 R3HDMLQ9H3Y0 253 aa28.42■■■□□ 2.14
VPS37B-203ENST00000535765 RWDD1Q9H446 243 aaPredicted RBP28.42■■■□□ 2.14
VPS37B-203ENST00000535765 TTC41PQ6P2S7 1318 aa28.42■■■□□ 2.14
VPS37B-203ENST00000535765 PHF20L1A8MW92 1017 aa28.41■■■□□ 2.14
VPS37B-203ENST00000535765 NOM1Q5C9Z4 860 aaKnown RBP28.41■■■□□ 2.14
VPS37B-203ENST00000535765 TGFBRAP1Q8WUH2 860 aa28.41■■■□□ 2.14
VPS37B-203ENST00000535765 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.41■■■□□ 2.14
VPS37B-203ENST00000535765 TCRBV5S4A2TA0A5A2 114 aa28.4■■■□□ 2.14
VPS37B-203ENST00000535765 IRF6O14896 467 aa28.4■■■□□ 2.14
VPS37B-203ENST00000535765 DYNLL1P63167 89 aaKnown RBP28.4■■■□□ 2.14
VPS37B-203ENST00000535765 PPATQ06203 517 aa28.4■■■□□ 2.14
VPS37B-203ENST00000535765 PPIL2Q13356 520 aa28.4■■■□□ 2.14
VPS37B-203ENST00000535765 BRI3BPQ8WY22 251 aa28.4■■■□□ 2.14
VPS37B-203ENST00000535765 EDC3Q96F86 508 aaKnown RBP28.4■■■□□ 2.14
VPS37B-203ENST00000535765 SNAPC2Q13487 334 aa28.39■■■□□ 2.14
VPS37B-203ENST00000535765 MIGA1Q8NAN2 632 aa28.39■■■□□ 2.14
VPS37B-203ENST00000535765 RIOK1Q9BRS2 568 aaKnown RBP28.39■■■□□ 2.14
VPS37B-203ENST00000535765 PI4KBQ9UBF8 816 aa28.39■■■□□ 2.14
VPS37B-203ENST00000535765 ZBTB47Q9UFB7 747 aaPredicted RBP28.39■■■□□ 2.14
VPS37B-203ENST00000535765 FLT1P17948 1338 aa28.39■■■□□ 2.13
VPS37B-203ENST00000535765 SIPA1L1O43166 1804 aa28.39■■■□□ 2.13
VPS37B-203ENST00000535765 DOCK1Q14185 1865 aa28.38■■■□□ 2.13
VPS37B-203ENST00000535765 FKTNO75072 461 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms