RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 TRIM17Q9Y577 477 aa10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 RFX7Q2KHR2 1363 aa10.49□□□□□ -0.73
SFSWAP-202ENST00000535202 ENTPD3O75355 529 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 WDHD1O75717 1129 aaPredicted RBP10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 CETPP11597 493 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 RGS19P49795 217 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 SNAPC2Q13487 334 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 CCDC158Q5M9N0 1113 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 CEP85Q6P2H3 762 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 FAM43AQ8N2R8 423 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 ZNF384Q8TF68 577 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 NSUN4Q96CB9 384 aaKnown RBP10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 FAM163AQ96GL9 167 aaPredicted RBP10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 ERO1AQ96HE7 468 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 ZFYVE28Q9HCC9 887 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 DDX4Q9NQI0 724 aaKnown RBP10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 SNRKQ9NRH2 765 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 LRP2BPQ9P2M1 347 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 ZNF112Q9UJU3 913 aa10.48□□□□□ -0.73
SFSWAP-202ENST00000535202 MYO5AQ9Y4I1 1855 aaKnown RBP10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 GPR75-ASB3A0A0A6YYF3 556 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 BTBD19C9JJ37 291 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 LDHCP07864 332 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 MS4A1P11836 297 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 RHBDL3P58872 404 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 SP3Q02447 781 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 PPATQ06203 517 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 NOL9Q5SY16 702 aaKnown RBP10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 SH3BP5LQ7L8J4 393 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 OTOP1Q7RTM1 612 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 NOP58Q9Y2X3 529 aaKnown RBP10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 ATRNL1Q5VV63 1379 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 DOCK1Q14185 1865 aa10.47□□□□□ -0.73
SFSWAP-202ENST00000535202 DDTLA6NHG4 134 aaPredicted RBP10.46□□□□□ -0.73
SFSWAP-202ENST00000535202 SLURP2P0DP57 97 aa10.46□□□□□ -0.73
SFSWAP-202ENST00000535202 NOL10Q9BSC4 688 aaKnown RBP10.46□□□□□ -0.73
SFSWAP-202ENST00000535202 CCDC8Q9H0W5 538 aaPredicted RBP10.46□□□□□ -0.73
SFSWAP-202ENST00000535202 TLR7Q9NYK1 1049 aaKnown RBP10.46□□□□□ -0.73
SFSWAP-202ENST00000535202 DBNLQ9UJU6 430 aaKnown RBP10.46□□□□□ -0.73
SFSWAP-202ENST00000535202 EXOC6BQ9Y2D4 811 aa10.46□□□□□ -0.73
SFSWAP-202ENST00000535202 ZSWIM8A7E2V4 1837 aa10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 PHF20L1A8MW92 1017 aa10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 ZAP70P43403 619 aa10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 NAA16Q6N069 864 aaPredicted RBP10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 TEX11Q8IYF3 940 aa10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 SCYL3Q8IZE3 742 aa10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 EAF2Q96CJ1 260 aaPredicted RBP10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 EFCC1Q9HA90 598 aa10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 ZCCHC17Q9NP64 241 aaKnown RBP10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 PICK1Q9NRD5 415 aa10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 RCAN3Q9UKA8 241 aa10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 KCNH4Q9UQ05 1017 aa10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 COG6Q9Y2V7 657 aa10.45□□□□□ -0.74
SFSWAP-202ENST00000535202 CDK5RAP2Q96SN8 1893 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 ATAD5Q96QE3 1844 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 FAM196BA6NMK8 535 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 TLR2O60603 784 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 CYP2E1P05181 493 aaPredicted RBP10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 CAP1Q01518 475 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 ANKRD23Q86SG2 305 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 AACSQ86V21 672 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 ERC1Q8IUD2 1116 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 SH3RF3Q8TEJ3 882 aaPredicted RBP10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 ZNF512BQ96KM6 892 aaPredicted RBP10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 OSBPL5Q9H0X9 879 aaPredicted RBP10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 PIH1D3Q9NQM4 214 aaKnown RBP10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 AATFQ9NY61 560 aaKnown RBP eCLIP10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 DDX19BQ9UMR2 479 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 PTPN22Q9Y2R2 807 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 PHIPQ8WWQ0 1821 aa10.44□□□□□ -0.74
SFSWAP-202ENST00000535202 PTPRFP10586 1907 aa10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 FOCADQ5VW36 1801 aa10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 APBB1O00213 710 aa10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 PDHXO00330 501 aa10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 NPM3O75607 178 aaKnown RBP10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 BAG3O95817 575 aa10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 MAP4K4O95819 1239 aaPredicted RBP10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 ARHGEF6Q15052 776 aa10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 HSP90AB4PQ58FF6 505 aa10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 ADGRA1Q86SQ6 560 aa10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 IL1RAPL2Q9NP60 686 aa10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 ZHX2Q9Y6X8 837 aa10.43□□□□□ -0.74
SFSWAP-202ENST00000535202 COL2A1P02458 1487 aaPredicted RBP10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 SIPA1L1O43166 1804 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 CXCL11O14625 94 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 TBC1D12O60347 775 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 CTNND1O60716 968 aaKnown RBP10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 HMMRO75330 724 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 IDH1O75874 414 aaKnown RBP10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 PLCG2P16885 1265 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 PTPRAP18433 802 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 MAP3K10Q02779 954 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 MOGSQ13724 837 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 KIF22Q14807 665 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 GADL1Q6ZQY3 521 aa10.42□□□□□ -0.74
SFSWAP-202ENST00000535202 CCDC84Q86UT8 332 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms