RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.94■□□□□ 0.3
TSPAN4-220ENST00000532375 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.94■□□□□ 0.3
TSPAN4-220ENST00000532375 CCDC102AQ96A19 550 aa16.94■□□□□ 0.3
TSPAN4-220ENST00000532375 RIOK1Q9BRS2 568 aaKnown RBP16.94■□□□□ 0.3
TSPAN4-220ENST00000532375 WBP1LQ9NX94 342 aa16.94■□□□□ 0.3
TSPAN4-220ENST00000532375 STAP2Q9UGK3 403 aa16.94■□□□□ 0.3
TSPAN4-220ENST00000532375 BAG3O95817 575 aa16.93■□□□□ 0.3
TSPAN4-220ENST00000532375 ADD2P35612 726 aa16.93■□□□□ 0.3
TSPAN4-220ENST00000532375 NUCB1Q02818 461 aa16.93■□□□□ 0.3
TSPAN4-220ENST00000532375 SLC9C2Q5TAH2 1124 aa16.93■□□□□ 0.3
TSPAN4-220ENST00000532375 PAXIP1Q6ZW49 1069 aaPredicted RBP16.93■□□□□ 0.3
TSPAN4-220ENST00000532375 ZNF112Q9UJU3 913 aa16.93■□□□□ 0.3
TSPAN4-220ENST00000532375 ZNF532Q9HCE3 1301 aa16.93■□□□□ 0.3
TSPAN4-220ENST00000532375 SIPA1L1O43166 1804 aa16.92■□□□□ 0.3
TSPAN4-220ENST00000532375 MX1P20591 662 aa16.92■□□□□ 0.3
TSPAN4-220ENST00000532375 NOGQ13253 232 aa16.92■□□□□ 0.3
TSPAN4-220ENST00000532375 GRM1Q13255 1194 aa16.92■□□□□ 0.3
TSPAN4-220ENST00000532375 MIGA2Q7L4E1 593 aa16.92■□□□□ 0.3
TSPAN4-220ENST00000532375 TEX11Q8IYF3 940 aa16.92■□□□□ 0.3
TSPAN4-220ENST00000532375 MIGA1Q8NAN2 632 aa16.92■□□□□ 0.3
TSPAN4-220ENST00000532375 OSBPL5Q9H0X9 879 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-220ENST00000532375 COL2A1P02458 1487 aaPredicted RBP16.92■□□□□ 0.3
TSPAN4-220ENST00000532375 PLCG2P16885 1265 aa16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 IREB2P48200 963 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 PDE1AP54750 535 aa16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 MAP3K9P80192 1104 aa16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 PICALMQ13492 652 aa16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 B4GALNT3Q6L9W6 998 aa16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 ANKRD13AQ8IZ07 590 aa16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 CSRNP1Q96S65 589 aa16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 LNPKQ9C0E8 428 aa16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 LAMB1P07942 1786 aa16.91■□□□□ 0.3
TSPAN4-220ENST00000532375 PHF20L1A8MW92 1017 aa16.9■□□□□ 0.3
TSPAN4-220ENST00000532375 GLRX3O76003 335 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-220ENST00000532375 HSPA1AP0DMV8 641 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-220ENST00000532375 HSPA1BP0DMV9 641 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-220ENST00000532375 GJA5P36382 358 aa16.9■□□□□ 0.3
TSPAN4-220ENST00000532375 CHD1LQ86WJ1 897 aa16.9■□□□□ 0.3
TSPAN4-220ENST00000532375 KBTBD3Q8NAB2 608 aa16.9■□□□□ 0.3
TSPAN4-220ENST00000532375 TGFBRAP1Q8WUH2 860 aa16.9■□□□□ 0.3
TSPAN4-220ENST00000532375 SLC10A4Q96EP9 437 aa16.9■□□□□ 0.3
TSPAN4-220ENST00000532375 GPATCH3Q96I76 525 aa16.9■□□□□ 0.3
TSPAN4-220ENST00000532375 VGLL4Q14135 290 aa16.89■□□□□ 0.29
TSPAN4-220ENST00000532375 UBE3CQ15386 1083 aa16.89■□□□□ 0.29
TSPAN4-220ENST00000532375 SPRYD7Q5W111 196 aa16.89■□□□□ 0.29
TSPAN4-220ENST00000532375 HOOK2Q96ED9 719 aa16.89■□□□□ 0.29
TSPAN4-220ENST00000532375 NOL10Q9BSC4 688 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-220ENST00000532375 ZNF341Q9BYN7 854 aa16.89■□□□□ 0.29
TSPAN4-220ENST00000532375 FLT1P17948 1338 aa16.89■□□□□ 0.29
TSPAN4-220ENST00000532375 MYH1P12882 1939 aa16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 ERC2O15083 957 aa16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 TBC1D12O60347 775 aa16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 INPP5BP32019 993 aa16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 DCAF15Q66K64 600 aa16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 METTL16Q86W50 562 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 MAPKAPK5Q8IW41 473 aa16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 PLEKHM2Q8IWE5 1019 aa16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 ZKSCAN4Q969J2 545 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 WNK4Q96J92 1243 aa16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 SNCAIPQ9Y6H5 919 aa16.88■□□□□ 0.29
TSPAN4-220ENST00000532375 MAGEB6P1A0A0J9YX57 407 aa16.87■□□□□ 0.29
TSPAN4-220ENST00000532375 MAP2K1Q02750 393 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-220ENST00000532375 CERS3Q8IU89 383 aa16.87■□□□□ 0.29
TSPAN4-220ENST00000532375 LCORLQ8N3X6 602 aa16.87■□□□□ 0.29
TSPAN4-220ENST00000532375 WRNIP1Q96S55 665 aa16.87■□□□□ 0.29
TSPAN4-220ENST00000532375 PUS7LQ9H0K6 701 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-220ENST00000532375 OSBPL3Q9H4L5 887 aa16.87■□□□□ 0.29
TSPAN4-220ENST00000532375 ELP3Q9H9T3 547 aa16.87■□□□□ 0.29
TSPAN4-220ENST00000532375 FOXN1O15353 648 aa16.86■□□□□ 0.29
TSPAN4-220ENST00000532375 PDE4AP27815 886 aa16.86■□□□□ 0.29
TSPAN4-220ENST00000532375 TM4SF4P48230 202 aa16.86■□□□□ 0.29
TSPAN4-220ENST00000532375 RRP1BQ14684 758 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-220ENST00000532375 ZSCAN29Q8IWY8 852 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-220ENST00000532375 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.86■□□□□ 0.29
TSPAN4-220ENST00000532375 PALD1Q9ULE6 856 aa16.86■□□□□ 0.29
TSPAN4-220ENST00000532375 DDX60LQ5H9U9 1706 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-220ENST00000532375 SPDYE5A6NIY4 337 aa16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 FAM196BA6NMK8 535 aa16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 ZBTB48P10074 688 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 MKRN3Q13064 507 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 NOL9Q5SY16 702 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 OSBP2Q969R2 916 aa16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 OPTNQ96CV9 577 aa16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 MS4A4AQ96JQ5 239 aa16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 DHX36Q9H2U1 1008 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 DNAJC18Q9H819 358 aa16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 ARMT1Q9H993 441 aa16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-220ENST00000532375 TESPA1A2RU30 521 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-220ENST00000532375 RNF113AO15541 343 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-220ENST00000532375 PRKAB2O43741 272 aa16.84■□□□□ 0.29
TSPAN4-220ENST00000532375 MBD4O95243 580 aa16.84■□□□□ 0.29
TSPAN4-220ENST00000532375 ZSCAN25Q6NSZ9 544 aa16.84■□□□□ 0.29
TSPAN4-220ENST00000532375 PI4KBQ9UBF8 816 aa16.84■□□□□ 0.29
TSPAN4-220ENST00000532375 PHIPQ8WWQ0 1821 aa16.84■□□□□ 0.29
TSPAN4-220ENST00000532375 EVX2Q03828 476 aa16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 ERO1BQ86YB8 467 aa16.83■□□□□ 0.28
TSPAN4-220ENST00000532375 FOXP4Q8IVH2 680 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms