RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 SURF6O75683 361 aaKnown RBP11.54□□□□□ -0.56
VPS26B-207ENST00000532160 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
VPS26B-207ENST00000532160 MYCP01106 439 aaPredicted RBP11.54□□□□□ -0.56
VPS26B-207ENST00000532160 PRDX5P30044 214 aa11.54□□□□□ -0.56
VPS26B-207ENST00000532160 TCP10Q12799 353 aa11.54□□□□□ -0.56
VPS26B-207ENST00000532160 SLC9C1Q4G0N8 1177 aa11.54□□□□□ -0.56
VPS26B-207ENST00000532160 CDC42EP5Q6NZY7 148 aa11.54□□□□□ -0.56
VPS26B-207ENST00000532160 ZNF341Q9BYN7 854 aa11.54□□□□□ -0.56
VPS26B-207ENST00000532160 COPRSQ9NQ92 184 aa11.54□□□□□ -0.56
VPS26B-207ENST00000532160 HMMRO75330 724 aa11.53□□□□□ -0.56
VPS26B-207ENST00000532160 PHKA1P46020 1223 aa11.53□□□□□ -0.56
VPS26B-207ENST00000532160 LACTBP83111 547 aaPredicted RBP11.53□□□□□ -0.56
VPS26B-207ENST00000532160 ATP2B3Q16720 1220 aa11.53□□□□□ -0.56
VPS26B-207ENST00000532160 ZFPM1Q8IX07 1006 aa11.53□□□□□ -0.56
VPS26B-207ENST00000532160 SH3TC2Q8TF17 1288 aa11.53□□□□□ -0.56
VPS26B-207ENST00000532160 FAM151AQ8WW52 585 aa11.53□□□□□ -0.56
VPS26B-207ENST00000532160 HOOK2Q96ED9 719 aa11.53□□□□□ -0.56
VPS26B-207ENST00000532160 ZCCHC17Q9NP64 241 aaKnown RBP11.53□□□□□ -0.56
VPS26B-207ENST00000532160 FAM198AQ9UFP1 575 aa11.53□□□□□ -0.56
VPS26B-207ENST00000532160 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.53□□□□□ -0.56
VPS26B-207ENST00000532160 DOCK2Q92608 1830 aa11.53□□□□□ -0.56
VPS26B-207ENST00000532160 IGHDP01880 384 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 CTGFP29279 349 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 ADORA1P30542 326 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 PPATQ06203 517 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 G3BP1Q13283 466 aaKnown RBP eCLIP11.52□□□□□ -0.57
VPS26B-207ENST00000532160 OS9Q13438 667 aaPredicted RBP11.52□□□□□ -0.57
VPS26B-207ENST00000532160 ARHGEF6Q15052 776 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 C17orf99Q6UX52 265 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 CPA4Q9UI42 421 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 ZNF112Q9UJU3 913 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 ADGRA2Q96PE1 1338 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 ATRNL1Q5VV63 1379 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 TRIOBPQ9H2D6 2365 aa11.52□□□□□ -0.57
VPS26B-207ENST00000532160 SZT2Q5T011 3432 aa11.51□□□□□ -0.57
VPS26B-207ENST00000532160 WDHD1O75717 1129 aaPredicted RBP11.51□□□□□ -0.57
VPS26B-207ENST00000532160 CIAO1O76071 339 aa11.51□□□□□ -0.57
VPS26B-207ENST00000532160 LDHBP07195 334 aaKnown RBP11.51□□□□□ -0.57
VPS26B-207ENST00000532160 TFCP2Q12800 502 aa11.51□□□□□ -0.57
VPS26B-207ENST00000532160 MOGSQ13724 837 aa11.51□□□□□ -0.57
VPS26B-207ENST00000532160 SLC4A8Q2Y0W8 1093 aa11.51□□□□□ -0.57
VPS26B-207ENST00000532160 HABP4Q5JVS0 413 aaKnown RBP11.51□□□□□ -0.57
VPS26B-207ENST00000532160 NBPF11Q86T75 865 aa11.51□□□□□ -0.57
VPS26B-207ENST00000532160 GCC1Q96CN9 775 aa11.51□□□□□ -0.57
VPS26B-207ENST00000532160 USP40Q9NVE5 1235 aa11.51□□□□□ -0.57
VPS26B-207ENST00000532160 CEP126Q9P2H0 1117 aa11.51□□□□□ -0.57
VPS26B-207ENST00000532160 KCNH4Q9UQ05 1017 aa11.51□□□□□ -0.57
VPS26B-207ENST00000532160 PTPRFP10586 1907 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 RANBP2P49792 3224 aaKnown RBP11.5□□□□□ -0.57
VPS26B-207ENST00000532160 PDHXO00330 501 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 SMARCA5O60264 1052 aaPredicted RBP11.5□□□□□ -0.57
VPS26B-207ENST00000532160 SLURP2P0DP57 97 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 IL15P40933 162 aaPredicted RBP11.5□□□□□ -0.57
VPS26B-207ENST00000532160 AAMPQ13685 434 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 KIF22Q14807 665 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 NOL9Q5SY16 702 aaKnown RBP11.5□□□□□ -0.57
VPS26B-207ENST00000532160 ANKRD23Q86SG2 305 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 TRIM47Q96LD4 638 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 GNL3LQ9NVN8 582 aaKnown RBP11.5□□□□□ -0.57
VPS26B-207ENST00000532160 FBXO3Q9UK99 471 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 DENND2AQ9ULE3 1009 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 NOP58Q9Y2X3 529 aaKnown RBP11.5□□□□□ -0.57
VPS26B-207ENST00000532160 RBM19Q9Y4C8 960 aaKnown RBP11.5□□□□□ -0.57
VPS26B-207ENST00000532160 SALL1Q9NSC2 1324 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 MGAMO43451 1857 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 RFX7Q2KHR2 1363 aa11.5□□□□□ -0.57
VPS26B-207ENST00000532160 PHIPQ8WWQ0 1821 aa11.49□□□□□ -0.57
VPS26B-207ENST00000532160 PSMC4P43686 418 aa11.49□□□□□ -0.57
VPS26B-207ENST00000532160 RGS3P49796 1198 aa11.49□□□□□ -0.57
VPS26B-207ENST00000532160 RASGRF1Q13972 1273 aa11.49□□□□□ -0.57
VPS26B-207ENST00000532160 MTFR1Q15390 333 aa11.49□□□□□ -0.57
VPS26B-207ENST00000532160 CCDC102BQ68D86 513 aa11.49□□□□□ -0.57
VPS26B-207ENST00000532160 SH3BP5LQ7L8J4 393 aa11.49□□□□□ -0.57
VPS26B-207ENST00000532160 IL1RAPL2Q9NP60 686 aa11.49□□□□□ -0.57
VPS26B-207ENST00000532160 PHF20L1A8MW92 1017 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 SEMA3EO15041 775 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 GNRH1P01148 92 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 OSBPP22059 807 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 TIMM10P62072 90 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 HDAC1Q13547 482 aaPredicted RBP11.48□□□□□ -0.57
VPS26B-207ENST00000532160 B4GALNT3Q6L9W6 998 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 GPAT2Q6NUI2 795 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 RHPN1Q8TCX5 695 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 SHISA4Q96DD7 197 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 RWDD1Q9H446 243 aaPredicted RBP11.48□□□□□ -0.57
VPS26B-207ENST00000532160 DCTPP1Q9H773 170 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 DDX4Q9NQI0 724 aaKnown RBP11.48□□□□□ -0.57
VPS26B-207ENST00000532160 SRRDQ9UH36 339 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 GAKO14976 1311 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 DOCK1Q14185 1865 aa11.48□□□□□ -0.57
VPS26B-207ENST00000532160 DOCK3Q8IZD9 2030 aa11.47□□□□□ -0.57
VPS26B-207ENST00000532160 CYP2C8P10632 490 aa11.47□□□□□ -0.57
VPS26B-207ENST00000532160 BCRP11274 1271 aa11.47□□□□□ -0.57
VPS26B-207ENST00000532160 PRMT2P55345 433 aa11.47□□□□□ -0.57
VPS26B-207ENST00000532160 DZIP1Q86YF9 867 aaKnown RBP11.47□□□□□ -0.57
VPS26B-207ENST00000532160 PARK7Q99497 189 aaKnown RBP11.47□□□□□ -0.57
VPS26B-207ENST00000532160 IDI2Q9BXS1 227 aa11.47□□□□□ -0.57
VPS26B-207ENST00000532160 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.47□□□□□ -0.57
VPS26B-207ENST00000532160 MYPNQ86TC9 1320 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms