RNA–Protein interactions for RNA: ENST00000531660.5

NR1H3-233, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-233ENST00000531660 DDX4Q9NQI0 724 aaKnown RBP20.54■□□□□ 0.88
NR1H3-233ENST00000531660 ZNF112Q9UJU3 913 aa20.54■□□□□ 0.88
NR1H3-233ENST00000531660 DOCK2Q92608 1830 aa20.54■□□□□ 0.88
NR1H3-233ENST00000531660 COL2A1P02458 1487 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-233ENST00000531660 CYP7A1P22680 504 aa20.53■□□□□ 0.88
NR1H3-233ENST00000531660 MKRN3Q13064 507 aaKnown RBP20.53■□□□□ 0.88
NR1H3-233ENST00000531660 MIGA2Q7L4E1 593 aa20.53■□□□□ 0.88
NR1H3-233ENST00000531660 TEX11Q8IYF3 940 aa20.53■□□□□ 0.88
NR1H3-233ENST00000531660 ELP3Q9H9T3 547 aa20.53■□□□□ 0.88
NR1H3-233ENST00000531660 ATRNL1Q5VV63 1379 aa20.53■□□□□ 0.88
NR1H3-233ENST00000531660 TRPA1O75762 1119 aa20.52■□□□□ 0.88
NR1H3-233ENST00000531660 MAP3K10Q02779 954 aa20.52■□□□□ 0.88
NR1H3-233ENST00000531660 PICALMQ13492 652 aa20.52■□□□□ 0.88
NR1H3-233ENST00000531660 ZSCAN29Q8IWY8 852 aaPredicted RBP20.52■□□□□ 0.88
NR1H3-233ENST00000531660 OPTNQ96CV9 577 aa20.52■□□□□ 0.88
NR1H3-233ENST00000531660 ANTXR1Q9H6X2 564 aa20.52■□□□□ 0.88
NR1H3-233ENST00000531660 AATFQ9NY61 560 aaKnown RBP eCLIP20.52■□□□□ 0.88
NR1H3-233ENST00000531660 NDUFB9Q9Y6M9 179 aa20.52■□□□□ 0.88
NR1H3-233ENST00000531660 SPDYE5A6NIY4 337 aa20.51■□□□□ 0.87
NR1H3-233ENST00000531660 ALDH1A1P00352 501 aa20.51■□□□□ 0.87
NR1H3-233ENST00000531660 SH3BP5LQ7L8J4 393 aa20.51■□□□□ 0.87
NR1H3-233ENST00000531660 ADGRA1Q86SQ6 560 aa20.51■□□□□ 0.87
NR1H3-233ENST00000531660 ERO1BQ86YB8 467 aa20.51■□□□□ 0.87
NR1H3-233ENST00000531660 SH3RF3Q8TEJ3 882 aaPredicted RBP20.51■□□□□ 0.87
NR1H3-233ENST00000531660 TSKSQ9UJT2 592 aa20.51■□□□□ 0.87
NR1H3-233ENST00000531660 SNCAIPQ9Y6H5 919 aa20.51■□□□□ 0.87
NR1H3-233ENST00000531660 DDTLA6NHG4 134 aaPredicted RBP20.5■□□□□ 0.87
NR1H3-233ENST00000531660 SMARCA5O60264 1052 aaPredicted RBP20.5■□□□□ 0.87
NR1H3-233ENST00000531660 GJA5P36382 358 aa20.5■□□□□ 0.87
NR1H3-233ENST00000531660 MAGEB6Q8N7X4 407 aa20.5■□□□□ 0.87
NR1H3-233ENST00000531660 DNAJC2Q99543 621 aaKnown RBP20.5■□□□□ 0.87
NR1H3-233ENST00000531660 HAUS7Q99871 368 aa20.5■□□□□ 0.87
NR1H3-233ENST00000531660 CFHR5Q9BXR6 569 aa20.5■□□□□ 0.87
NR1H3-233ENST00000531660 OSBPL5Q9H0X9 879 aaPredicted RBP20.5■□□□□ 0.87
NR1H3-233ENST00000531660 BCL11AQ9H165 835 aa20.5■□□□□ 0.87
NR1H3-233ENST00000531660 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.5■□□□□ 0.87
NR1H3-233ENST00000531660 CASP8AP2Q9UKL3 1982 aa20.49■□□□□ 0.87
NR1H3-233ENST00000531660 TESPA1A2RU30 521 aaPredicted RBP20.49■□□□□ 0.87
NR1H3-233ENST00000531660 GOLIM4O00461 696 aa20.49■□□□□ 0.87
NR1H3-233ENST00000531660 TBC1D12O60347 775 aa20.49■□□□□ 0.87
NR1H3-233ENST00000531660 HDAC1Q13547 482 aaPredicted RBP20.49■□□□□ 0.87
NR1H3-233ENST00000531660 NOL9Q5SY16 702 aaKnown RBP20.49■□□□□ 0.87
NR1H3-233ENST00000531660 ZKSCAN4Q969J2 545 aaPredicted RBP20.49■□□□□ 0.87
NR1H3-233ENST00000531660 GPATCH3Q96I76 525 aa20.49■□□□□ 0.87
NR1H3-233ENST00000531660 DHX36Q9H2U1 1008 aaKnown RBP20.49■□□□□ 0.87
NR1H3-233ENST00000531660 BOLA2Q9H3K6 86 aa20.49■□□□□ 0.87
NR1H3-233ENST00000531660 ECHDC1Q9NTX5 307 aa20.49■□□□□ 0.87
NR1H3-233ENST00000531660 PAG1Q9NWQ8 432 aa20.49■□□□□ 0.87
NR1H3-233ENST00000531660 INPP5BP32019 993 aa20.48■□□□□ 0.87
NR1H3-233ENST00000531660 GTF2A2P52657 109 aa20.48■□□□□ 0.87
NR1H3-233ENST00000531660 OTUD7BQ6GQQ9 843 aa20.48■□□□□ 0.87
NR1H3-233ENST00000531660 IFNL1Q8IU54 200 aa20.48■□□□□ 0.87
NR1H3-233ENST00000531660 TNS4Q8IZW8 715 aa20.48■□□□□ 0.87
NR1H3-233ENST00000531660 FOCADQ5VW36 1801 aa20.48■□□□□ 0.87
NR1H3-233ENST00000531660 CDK5RAP2Q96SN8 1893 aa20.47■□□□□ 0.87
NR1H3-233ENST00000531660 PHF20L1A8MW92 1017 aa20.47■□□□□ 0.87
NR1H3-233ENST00000531660 PPATQ06203 517 aa20.47■□□□□ 0.87
NR1H3-233ENST00000531660 PPIL2Q13356 520 aa20.47■□□□□ 0.87
NR1H3-233ENST00000531660 NOM1Q5C9Z4 860 aaKnown RBP20.47■□□□□ 0.87
NR1H3-233ENST00000531660 SLC9C2Q5TAH2 1124 aa20.47■□□□□ 0.87
NR1H3-233ENST00000531660 GCC1Q96CN9 775 aa20.47■□□□□ 0.87
NR1H3-233ENST00000531660 OTUD5Q96G74 571 aa20.47■□□□□ 0.87
NR1H3-233ENST00000531660 MS4A4AQ96JQ5 239 aa20.47■□□□□ 0.87
NR1H3-233ENST00000531660 PDE6AP16499 860 aa20.46■□□□□ 0.87
NR1H3-233ENST00000531660 TGFBRAP1Q8WUH2 860 aa20.46■□□□□ 0.87
NR1H3-233ENST00000531660 CNKSR2Q8WXI2 1034 aa20.46■□□□□ 0.87
NR1H3-233ENST00000531660 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.46■□□□□ 0.87
NR1H3-233ENST00000531660 PI4KBQ9UBF8 816 aa20.46■□□□□ 0.87
NR1H3-233ENST00000531660 CTNND1O60716 968 aaKnown RBP20.45■□□□□ 0.86
NR1H3-233ENST00000531660 DYNLL1P63167 89 aaKnown RBP20.45■□□□□ 0.86
NR1H3-233ENST00000531660 MIGA1Q8NAN2 632 aa20.45■□□□□ 0.86
NR1H3-233ENST00000531660 HERC5Q9UII4 1024 aaKnown RBP20.45■□□□□ 0.86
NR1H3-233ENST00000531660 SUPT16HQ9Y5B9 1047 aaKnown RBP20.45■□□□□ 0.86
NR1H3-233ENST00000531660 FLT1P17948 1338 aa20.45■□□□□ 0.86
NR1H3-233ENST00000531660 CETPP11597 493 aa20.44■□□□□ 0.86
NR1H3-233ENST00000531660 SNAPC2Q13487 334 aa20.44■□□□□ 0.86
NR1H3-233ENST00000531660 MAPKAPK5Q8IW41 473 aa20.44■□□□□ 0.86
NR1H3-233ENST00000531660 SCYL3Q8IZE3 742 aa20.44■□□□□ 0.86
NR1H3-233ENST00000531660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.44■□□□□ 0.86
NR1H3-233ENST00000531660 ZBTB47Q9UFB7 747 aaPredicted RBP20.44■□□□□ 0.86
NR1H3-233ENST00000531660 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
NR1H3-233ENST00000531660 MAGEB6P1A0A0J9YX57 407 aa20.43■□□□□ 0.86
NR1H3-233ENST00000531660 TCRBV5S4A2TA0A5A2 114 aa20.43■□□□□ 0.86
NR1H3-233ENST00000531660 IGF2BP3O00425 579 aaKnown RBP eCLIP20.43■□□□□ 0.86
NR1H3-233ENST00000531660 IRF6O14896 467 aa20.43■□□□□ 0.86
NR1H3-233ENST00000531660 ZSCAN25Q6NSZ9 544 aa20.43■□□□□ 0.86
NR1H3-233ENST00000531660 FOXP4Q8IVH2 680 aaPredicted RBP20.43■□□□□ 0.86
NR1H3-233ENST00000531660 EDC3Q96F86 508 aaKnown RBP20.43■□□□□ 0.86
NR1H3-233ENST00000531660 RIOK1Q9BRS2 568 aaKnown RBP20.43■□□□□ 0.86
NR1H3-233ENST00000531660 PICK1Q9NRD5 415 aa20.43■□□□□ 0.86
NR1H3-233ENST00000531660 ZNF532Q9HCE3 1301 aa20.43■□□□□ 0.86
NR1H3-233ENST00000531660 MYH7P12883 1935 aa20.43■□□□□ 0.86
NR1H3-233ENST00000531660 CCL15-CCL14A0A0B4J2E2 113 aa20.42■□□□□ 0.86
NR1H3-233ENST00000531660 TBC1D8O95759 1140 aa20.42■□□□□ 0.86
NR1H3-233ENST00000531660 ADD2P35612 726 aa20.42■□□□□ 0.86
NR1H3-233ENST00000531660 USP5P45974 858 aa20.42■□□□□ 0.86
NR1H3-233ENST00000531660 CCL15Q16663 113 aa20.42■□□□□ 0.86
NR1H3-233ENST00000531660 METTL16Q86W50 562 aaKnown RBP20.42■□□□□ 0.86
NR1H3-233ENST00000531660 BRI3BPQ8WY22 251 aa20.42■□□□□ 0.86
NR1H3-233ENST00000531660 PTPN18Q99952 460 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms