RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 ZSCAN29Q8IWY8 852 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 TOMM22Q9NS69 142 aa10.1□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 ARPP21Q9UBL0 812 aaPredicted RBP10.1□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 TAF6LQ9Y6J9 622 aa10.1□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 DOCK2Q92608 1830 aa10.1□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 AK9Q5TCS8 1911 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 GLTPD2A6NH11 291 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 WNT10BO00744 389 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 EGFRP00533 1210 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 NFIAQ12857 509 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 TRDNQ13061 729 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 RABEP1Q15276 862 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 ADCK5Q3MIX3 580 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 TSGA10IPQ3SY00 556 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 SPDYE2Q495Y8 402 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 SBK1Q52WX2 424 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 C12orf60Q5U649 245 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 MFSD6Q6ZSS7 791 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 TTC6Q86TZ1 520 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 ZFPM1Q8IX07 1006 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 ZBED3Q96IU2 234 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 NEK1Q96PY6 1258 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 KIF2CQ99661 725 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 IDI2Q9BXS1 227 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 OSBPL5Q9H0X9 879 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 RNF41Q9H4P4 317 aaPredicted RBP10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 DDX4Q9NQI0 724 aaKnown RBP10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 MKRN1Q9UHC7 482 aaKnown RBP10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 CYP46A1Q9Y6A2 500 aa10.09□□□□□ -0.79
NEDD8-MDP1-201ENST00000530579 ZC3H4Q9UPT8 1303 aaKnown RBP10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 CHD4Q14839 1912 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 MYH13Q9UKX3 1938 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 ENTPD3O75355 529 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 HLA-DOAP06340 250 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 CASTP20810 708 aaKnown RBP10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 TNNI2P48788 182 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 PLCD1P51178 756 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 NEK4P51957 841 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 RRP12Q5JTH9 1297 aaKnown RBP10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 AKNAD1Q5T1N1 836 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 BLOC1S2Q6QNY1 142 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 STOX1Q6ZVD7 989 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 RALYLQ86SE5 291 aaKnown RBP10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 TBC1D10CQ8IV04 446 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 TRPM4Q8TD43 1214 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 UPF3BQ9BZI7 483 aaKnown RBP10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 TM6SF1Q9BZW5 370 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 MKNK2Q9HBH9 465 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 INCENPQ9NQS7 918 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 ADARB2Q9NS39 739 aaKnown RBP10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 FAM198AQ9UFP1 575 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 HACL1Q9UJ83 578 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 ANAPC4Q9UJX5 808 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 MAST2Q6P0Q8 1798 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 SCN9AQ15858 1988 aa10.08□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 SMIM22K7EJ46 135 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 NPM3O75607 178 aaKnown RBP10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 HMGB1P09429 215 aaKnown RBP10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 CPA1P15085 419 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 FGD1P98174 961 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 PDE4BQ07343 736 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 FKBP1CQ5VVH2 108 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 RUFY3Q7L099 469 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 CRACR2BQ8N4Y2 399 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 NCOA7Q8NI08 942 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 FAM151AQ8WW52 585 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 DYNLL2Q96FJ2 89 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 TRIM34Q9BYJ4 488 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 KRT23Q9C075 422 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 DHX36Q9H2U1 1008 aaKnown RBP10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 CNNM2Q9H8M5 875 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 ZSWIM6Q9HCJ5 1215 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 PDRG1Q9NUG6 133 aa10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 ASTN2O75129 1339 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 IQCA1LA6NCM1 817 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 B4E1Z4 1266 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 ST18O60284 1047 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 PRDM1O75626 825 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 RPS6KB1P23443 525 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 EPHX2P34913 555 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 HIRAP54198 1017 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 EVX2Q03828 476 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 TNFAIP1Q13829 316 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 ANGEL2Q5VTE6 544 aaKnown RBP10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 ZNF444Q8N0Y2 327 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 STAG1Q8WVM7 1258 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 IL17RAQ96F46 866 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 L3MBTL3Q96JM7 780 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 ZNF287Q9HBT7 754 aa10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 SCAF8Q9UPN6 1271 aaKnown RBP10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 MYO5AQ9Y4I1 1855 aaKnown RBP10.06□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 DDTLA6NHG4 134 aaPredicted RBP10.05□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 RANBP6O60518 1105 aaKnown RBP10.05□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 KDM4AO75164 1064 aa10.05□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 PCP11498 1178 aaKnown RBP10.05□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 MCM5P33992 734 aa10.05□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 CDK8P49336 464 aa10.05□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 RASA3Q14644 834 aa10.05□□□□□ -0.8
NEDD8-MDP1-201ENST00000530579 EAPPQ56P03 285 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms