RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 CAVIN4Q5BKX8 364 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 PHKBQ93100 1093 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 ZNF396Q96N95 335 aaPredicted RBP13.4□□□□□ -0.26
USP35-207ENST00000530546 NACAP1Q9BZK3 213 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 BSDC1Q9NW68 430 aaPredicted RBP13.4□□□□□ -0.26
USP35-207ENST00000530546 ZSWIM5Q9P217 1185 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 JAG2Q9Y219 1238 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 ME1P48163 572 aa13.4□□□□□ -0.26
USP35-207ENST00000530546 ALX1Q15699 326 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 APOA5Q6Q788 366 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 MFSD6Q6ZSS7 791 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 CCAR1Q8IX12 1150 aaKnown RBP13.39□□□□□ -0.27
USP35-207ENST00000530546 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
USP35-207ENST00000530546 TAF1P21675 1872 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 CDC27P30260 824 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 RPS8P62241 208 aaKnown RBP13.39□□□□□ -0.27
USP35-207ENST00000530546 TYRO3Q06418 890 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 AKNAD1Q5T1N1 836 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 DDX19AQ9NUU7 478 aaKnown RBP13.39□□□□□ -0.27
USP35-207ENST00000530546 RREB1Q92766 1687 aa13.39□□□□□ -0.27
USP35-207ENST00000530546 GOLGA8AA7E2F4 631 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 ZBTB43O43298 467 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 UBE4AQ14139 1066 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 IGDCC4Q8TDY8 1250 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 FAM84BQ96KN1 310 aaPredicted RBP13.38□□□□□ -0.27
USP35-207ENST00000530546 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 CLSTN2Q9H4D0 955 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 RCOR1Q9UKL0 485 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 WDR19Q8NEZ3 1342 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 MAGEB6P1A0A0J9YX57 407 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 DYNLL1P63167 89 aaKnown RBP13.38□□□□□ -0.27
USP35-207ENST00000530546 SLC51AQ86UW1 340 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 ALG1Q9BT22 464 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 LY9Q9HBG7 655 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 ZMYM6O95789 1325 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 CCDC82Q8N4S0 544 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 TMEM87BQ96K49 555 aa13.38□□□□□ -0.27
USP35-207ENST00000530546 UBE2Q2LH0YL09 131 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 RFC4P35249 363 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 SF3A1Q15459 793 aaKnown RBP13.37□□□□□ -0.27
USP35-207ENST00000530546 SLC10A5Q5PT55 438 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
USP35-207ENST00000530546 GOLPH3LQ9H4A5 285 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 FAM53CQ9NYF3 392 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 SLC12A7Q9Y666 1083 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 CLIC4Q9Y696 253 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 MRVI1Q9Y6F6 885 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 KIF28PB7ZC32 967 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 GNAT2P19087 354 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
USP35-207ENST00000530546 ZNF804BA4D1E1 1349 aa13.37□□□□□ -0.27
USP35-207ENST00000530546 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
USP35-207ENST00000530546 CYP2D7A0A087X1C5 515 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 STK38Q15208 465 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 ANO6Q4KMQ2 910 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 CCDC73Q6ZRK6 1079 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 FAM196AQ6ZSG2 479 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 FSIP1Q8NA03 581 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 CCDC112Q8NEF3 446 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 ZNF397Q8NF99 534 aaPredicted RBP13.36□□□□□ -0.27
USP35-207ENST00000530546 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 COL1A1P02452 1464 aaPredicted RBP13.36□□□□□ -0.27
USP35-207ENST00000530546 LUZP1Q86V48 1076 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 SLC26A6Q9BXS9 759 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 KRT23Q9C075 422 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 ARAP2Q8WZ64 1704 aa13.36□□□□□ -0.27
USP35-207ENST00000530546 AP5Z1O43299 807 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 IARSP41252 1262 aaKnown RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 PPARAQ07869 468 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 GNL2Q13823 731 aaKnown RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 GJD4Q96KN9 370 aaPredicted RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 A0A087WWV3 80 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 CDKL5O76039 1030 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 HOMEZQ8IX15 550 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 ERCC4Q92889 916 aaPredicted RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 PCDHA7Q9UN72 937 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
USP35-207ENST00000530546 WTAPQ15007 396 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 MYSM1Q5VVJ2 828 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
USP35-207ENST00000530546 ERICH2A1L162 156 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 RANBP6O60518 1105 aaKnown RBP13.34□□□□□ -0.27
USP35-207ENST00000530546 PRDM1O75626 825 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 HIBADHP31937 336 aaKnown RBP13.34□□□□□ -0.27
USP35-207ENST00000530546 KRT40Q6A162 431 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 TXNRD3Q86VQ6 643 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 STAG1Q8WVM7 1258 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 DNAJC25Q9H1X3 360 aa13.34□□□□□ -0.27
USP35-207ENST00000530546 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
USP35-207ENST00000530546 BCORQ6W2J9 1755 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms