RNA–Protein interactions for RNA: ENST00000528147.1

CDC27-205, Transcript of cell division cycle 27, humanhuman

TSL 4

Gene CDC27, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-205ENST00000528147 C17orf99Q6UX52 265 aa17.31■□□□□ 0.36
CDC27-205ENST00000528147 SH3BP5LQ7L8J4 393 aa17.31■□□□□ 0.36
CDC27-205ENST00000528147 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.31■□□□□ 0.36
CDC27-205ENST00000528147 IDI2Q9BXS1 227 aa17.31■□□□□ 0.36
CDC27-205ENST00000528147 PHF20L1A8MW92 1017 aa17.3■□□□□ 0.36
CDC27-205ENST00000528147 CD44P16070 742 aaKnown RBP17.3■□□□□ 0.36
CDC27-205ENST00000528147 ANKRD23Q86SG2 305 aa17.3■□□□□ 0.36
CDC27-205ENST00000528147 ZNF384Q8TF68 577 aa17.3■□□□□ 0.36
CDC27-205ENST00000528147 ARHGAP45Q92619 1136 aa17.3■□□□□ 0.36
CDC27-205ENST00000528147 USP40Q9NVE5 1235 aa17.3■□□□□ 0.36
CDC27-205ENST00000528147 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
CDC27-205ENST00000528147 TIMM10P62072 90 aa17.29■□□□□ 0.36
CDC27-205ENST00000528147 MAP3K10Q02779 954 aa17.29■□□□□ 0.36
CDC27-205ENST00000528147 FAM163AQ96GL9 167 aaPredicted RBP17.29■□□□□ 0.36
CDC27-205ENST00000528147 CCER2I3L3R5 266 aa17.28■□□□□ 0.36
CDC27-205ENST00000528147 WDHD1O75717 1129 aaPredicted RBP17.28■□□□□ 0.36
CDC27-205ENST00000528147 GABBR2O75899 941 aa17.28■□□□□ 0.36
CDC27-205ENST00000528147 RGS3P49796 1198 aa17.28■□□□□ 0.36
CDC27-205ENST00000528147 ARHGEF6Q15052 776 aa17.28■□□□□ 0.36
CDC27-205ENST00000528147 SLC9C1Q4G0N8 1177 aa17.28■□□□□ 0.36
CDC27-205ENST00000528147 GPAT2Q6NUI2 795 aa17.28■□□□□ 0.36
CDC27-205ENST00000528147 HDAC5Q9UQL6 1122 aa17.28■□□□□ 0.36
CDC27-205ENST00000528147 SZT2Q5T011 3432 aa17.27■□□□□ 0.36
CDC27-205ENST00000528147 A0A1B0GUL7 405 aa17.27■□□□□ 0.36
CDC27-205ENST00000528147 PDHXO00330 501 aa17.27■□□□□ 0.36
CDC27-205ENST00000528147 ENTPD3O75355 529 aa17.27■□□□□ 0.36
CDC27-205ENST00000528147 SLURP2P0DP57 97 aa17.27■□□□□ 0.36
CDC27-205ENST00000528147 DDX4Q9NQI0 724 aaKnown RBP17.27■□□□□ 0.36
CDC27-205ENST00000528147 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.36
CDC27-205ENST00000528147 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
CDC27-205ENST00000528147 SRGAP3O43295 1099 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 GNRH1P01148 92 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 TRIM27P14373 513 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 RHBDL3P58872 404 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 TFCP2Q12800 502 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 ZGPATQ8N5A5 531 aaKnown RBP17.26■□□□□ 0.35
CDC27-205ENST00000528147 SH3TC2Q8TF17 1288 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 XAGE2Q96GT9 111 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 TRIM47Q96LD4 638 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 CPA4Q9UI42 421 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 SIPA1L1O43166 1804 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 ATAD5Q96QE3 1844 aa17.26■□□□□ 0.35
CDC27-205ENST00000528147 CDK5RAP2Q96SN8 1893 aa17.25■□□□□ 0.35
CDC27-205ENST00000528147 DDTLA6NHG4 134 aaPredicted RBP17.25■□□□□ 0.35
CDC27-205ENST00000528147 CXCL11O14625 94 aa17.25■□□□□ 0.35
CDC27-205ENST00000528147 GNAI3P08754 354 aa17.25■□□□□ 0.35
CDC27-205ENST00000528147 BCRP11274 1271 aa17.25■□□□□ 0.35
CDC27-205ENST00000528147 SCYL3Q8IZE3 742 aa17.25■□□□□ 0.35
CDC27-205ENST00000528147 TRIOBPQ9H2D6 2365 aa17.25■□□□□ 0.35
CDC27-205ENST00000528147 DOCK3Q8IZD9 2030 aa17.25■□□□□ 0.35
CDC27-205ENST00000528147 MYO5AQ9Y4I1 1855 aaKnown RBP17.24■□□□□ 0.35
CDC27-205ENST00000528147 MROH7-TTC4A0A0A0MT08 1334 aa17.24■□□□□ 0.35
CDC27-205ENST00000528147 GPR75-ASB3A0A0A6YYF3 556 aa17.24■□□□□ 0.35
CDC27-205ENST00000528147 A0A0G2JLL6 359 aaPredicted RBP17.24■□□□□ 0.35
CDC27-205ENST00000528147 PTPRAP18433 802 aa17.24■□□□□ 0.35
CDC27-205ENST00000528147 PRMT2P55345 433 aa17.24■□□□□ 0.35
CDC27-205ENST00000528147 PI16Q6UXB8 463 aa17.24■□□□□ 0.35
CDC27-205ENST00000528147 PRRT2Q7Z6L0 340 aaPredicted RBP17.24■□□□□ 0.35
CDC27-205ENST00000528147 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
CDC27-205ENST00000528147 HMG20BQ9P0W2 317 aa17.24■□□□□ 0.35
CDC27-205ENST00000528147 LOC285556D6RIA3 1793 aa17.24■□□□□ 0.35
CDC27-205ENST00000528147 MAST2Q6P0Q8 1798 aa17.24■□□□□ 0.35
CDC27-205ENST00000528147 COL2A1P02458 1487 aaPredicted RBP17.24■□□□□ 0.35
CDC27-205ENST00000528147 FOCADQ5VW36 1801 aa17.24■□□□□ 0.35
CDC27-205ENST00000528147 PNMA6EA0A0J9YXQ4 647 aa17.23■□□□□ 0.35
CDC27-205ENST00000528147 OSBPP22059 807 aa17.23■□□□□ 0.35
CDC27-205ENST00000528147 BTDP43251 543 aa17.23■□□□□ 0.35
CDC27-205ENST00000528147 MECOMQ03112 1051 aa17.23■□□□□ 0.35
CDC27-205ENST00000528147 MVPQ14764 893 aaKnown RBP17.23■□□□□ 0.35
CDC27-205ENST00000528147 KIF22Q14807 665 aa17.23■□□□□ 0.35
CDC27-205ENST00000528147 DZIP1Q86YF9 867 aaKnown RBP17.23■□□□□ 0.35
CDC27-205ENST00000528147 SHISA4Q96DD7 197 aa17.23■□□□□ 0.35
CDC27-205ENST00000528147 TMEM106CQ9BVX2 250 aa17.23■□□□□ 0.35
CDC27-205ENST00000528147 ABCF2Q9UG63 623 aa17.23■□□□□ 0.35
CDC27-205ENST00000528147 SRRDQ9UH36 339 aa17.23■□□□□ 0.35
CDC27-205ENST00000528147 AFG3L2Q9Y4W6 797 aa17.23■□□□□ 0.35
CDC27-205ENST00000528147 CYP2C8P10632 490 aa17.22■□□□□ 0.35
CDC27-205ENST00000528147 ARID4AP29374 1257 aaPredicted RBP17.22■□□□□ 0.35
CDC27-205ENST00000528147 PSMC4P43686 418 aa17.22■□□□□ 0.35
CDC27-205ENST00000528147 AKAP2Q9Y2D5 859 aa17.22■□□□□ 0.35
CDC27-205ENST00000528147 BCAR3O75815 825 aa17.21■□□□□ 0.35
CDC27-205ENST00000528147 MTFR1Q15390 333 aa17.21■□□□□ 0.35
CDC27-205ENST00000528147 SPTY2D1Q68D10 685 aaPredicted RBP17.21■□□□□ 0.35
CDC27-205ENST00000528147 ATF7IPQ6VMQ6 1270 aa17.21■□□□□ 0.35
CDC27-205ENST00000528147 NSUN4Q96CB9 384 aaKnown RBP17.21■□□□□ 0.35
CDC27-205ENST00000528147 GCC1Q96CN9 775 aa17.21■□□□□ 0.35
CDC27-205ENST00000528147 PARK7Q99497 189 aaKnown RBP17.21■□□□□ 0.35
CDC27-205ENST00000528147 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.21■□□□□ 0.35
CDC27-205ENST00000528147 ZHX2Q9Y6X8 837 aa17.21■□□□□ 0.35
CDC27-205ENST00000528147 TBC1D12O60347 775 aa17.2■□□□□ 0.34
CDC27-205ENST00000528147 ECM2O94769 699 aaPredicted RBP17.2■□□□□ 0.34
CDC27-205ENST00000528147 MYCP01106 439 aaPredicted RBP17.2■□□□□ 0.34
CDC27-205ENST00000528147 HABP4Q5JVS0 413 aaKnown RBP17.2■□□□□ 0.34
CDC27-205ENST00000528147 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
CDC27-205ENST00000528147 SLF2Q8IX21 1173 aa17.2■□□□□ 0.34
CDC27-205ENST00000528147 SPATA5Q8NB90 893 aa17.2■□□□□ 0.34
CDC27-205ENST00000528147 SLC45A1Q9Y2W3 748 aa17.2■□□□□ 0.34
CDC27-205ENST00000528147 CTNND1O60716 968 aaKnown RBP17.19■□□□□ 0.34
CDC27-205ENST00000528147 GNAI2P04899 355 aa17.19■□□□□ 0.34
CDC27-205ENST00000528147 MCAMP43121 646 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms