RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 WASHC4Q2M389 1173 aa5.34□□□□□ -1.55
CHD7-205ENST00000527825 LCE2CQ5TA81 110 aa5.34□□□□□ -1.55
CHD7-205ENST00000527825 ZNF790Q6PG37 636 aa5.34□□□□□ -1.55
CHD7-205ENST00000527825 SLC10A4Q96EP9 437 aa5.34□□□□□ -1.55
CHD7-205ENST00000527825 DBNDD1Q9H9R9 158 aa5.34□□□□□ -1.55
CHD7-205ENST00000527825 SCN9AQ15858 1988 aa5.34□□□□□ -1.55
CHD7-205ENST00000527825 ECM29Q5VYK3 1845 aa5.34□□□□□ -1.55
CHD7-205ENST00000527825 LRRC37AA6NMS7 1700 aa5.34□□□□□ -1.56
CHD7-205ENST00000527825 MGAMO43451 1857 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 ABCC4O15439 1325 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 TERTO14746 1132 aaKnown RBP5.33□□□□□ -1.56
CHD7-205ENST00000527825 ECE2O60344 883 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 BBOX1O75936 387 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 FARP2O94887 1054 aaPredicted RBP5.33□□□□□ -1.56
CHD7-205ENST00000527825 PTPN12Q05209 780 aaKnown RBP5.33□□□□□ -1.56
CHD7-205ENST00000527825 LRIT3Q3SXY7 679 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 PRAMEF18Q5VWM3 479 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 SLC51AQ86UW1 340 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 SP8Q8IXZ3 490 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 ARMC2Q8NEN0 867 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 FOXJ1Q92949 421 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 EYA3Q99504 573 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 BIN2Q9UBW5 565 aaPredicted RBP5.33□□□□□ -1.56
CHD7-205ENST00000527825 ANGEL1Q9UNK9 670 aaKnown RBP5.33□□□□□ -1.56
CHD7-205ENST00000527825 CENPFP49454 3210 aa5.33□□□□□ -1.56
CHD7-205ENST00000527825 IGF2BP3O00425 579 aaKnown RBP eCLIP5.32□□□□□ -1.56
CHD7-205ENST00000527825 ZBTB48P10074 688 aaPredicted RBP5.32□□□□□ -1.56
CHD7-205ENST00000527825 GPTP24298 496 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 BMP8BP34820 402 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 MAP3K12Q12852 859 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 NR6A1Q15406 480 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 HLFQ16534 295 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 KIF6Q6ZMV9 814 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 DDX46Q7L014 1031 aaKnown RBP5.32□□□□□ -1.56
CHD7-205ENST00000527825 PPP1R42Q7Z4L9 355 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 TDHQ8IZJ6 230 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 NGEFQ8N5V2 710 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 FAM174AQ8TBP5 190 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 SNX27Q96L92 541 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 FAM161BQ96MY7 647 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 TESK2Q96S53 571 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 SIN3AQ96ST3 1273 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 HMX1Q9NP08 348 aaPredicted RBP5.32□□□□□ -1.56
CHD7-205ENST00000527825 SCAF8Q9UPN6 1271 aaKnown RBP5.32□□□□□ -1.56
CHD7-205ENST00000527825 UNC80Q8N2C7 3258 aa5.32□□□□□ -1.56
CHD7-205ENST00000527825 IBTKQ9P2D0 1353 aaPredicted RBP5.31□□□□□ -1.56
CHD7-205ENST00000527825 DUOX1Q9NRD9 1551 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 WIPF1O43516 503 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 ADH1CP00326 375 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 DEKP35659 375 aaKnown RBP5.31□□□□□ -1.56
CHD7-205ENST00000527825 GJA8P48165 433 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 PRMT2P55345 433 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 WDR4P57081 412 aaKnown RBP5.31□□□□□ -1.56
CHD7-205ENST00000527825 UBXN2AP68543 259 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 ARID5BQ14865 1188 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 TAF1CQ15572 869 aaPredicted RBP5.31□□□□□ -1.56
CHD7-205ENST00000527825 C4orf48Q5BLP8 95 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 TMC4Q7Z404 712 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 C7orf61Q8IZ16 206 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 BANK1Q8NDB2 785 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 MAFAQ8NHW3 353 aaPredicted RBP5.31□□□□□ -1.56
CHD7-205ENST00000527825 SHISA4Q96DD7 197 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 ZFP42Q96MM3 310 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 CARD14Q9BXL6 1004 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 UBE2OQ9C0C9 1292 aaKnown RBP5.31□□□□□ -1.56
CHD7-205ENST00000527825 RNF208Q9H0X6 261 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 ZFYVE28Q9HCC9 887 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 MYOZ2Q9NPC6 264 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 NSFL1CQ9UNZ2 370 aaKnown RBP5.31□□□□□ -1.56
CHD7-205ENST00000527825 HCN4Q9Y3Q4 1203 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 USP16Q9Y5T5 823 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 OTOFQ9HC10 1997 aa5.31□□□□□ -1.56
CHD7-205ENST00000527825 BTBD11A6QL63 1104 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 PPP1R12BO60237 982 aaPredicted RBP5.3□□□□□ -1.56
CHD7-205ENST00000527825 GNRH1P01148 92 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 TFRCP02786 760 aaKnown RBP5.3□□□□□ -1.56
CHD7-205ENST00000527825 GJB1P08034 283 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 VIL1P09327 827 aaKnown RBP5.3□□□□□ -1.56
CHD7-205ENST00000527825 HMOX1P09601 288 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 SNRPA1P09661 255 aaKnown RBP5.3□□□□□ -1.56
CHD7-205ENST00000527825 CCL5P13501 91 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 TIMP2P16035 220 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 AGERQ15109 404 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 MTFR1Q15390 333 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 MTHFSDQ2M296 383 aaKnown RBP5.3□□□□□ -1.56
CHD7-205ENST00000527825 SUSD4Q5VX71 490 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 BPHLQ86WA6 291 aaPredicted RBP5.3□□□□□ -1.56
CHD7-205ENST00000527825 AGBL3Q8NEM8 1001 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 RAET1EQ8TD07 263 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 EPS8L1Q8TE68 723 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 WNK4Q96J92 1243 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 CDK15Q96Q40 435 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 GDF15Q99988 308 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 KLF16Q9BXK1 252 aaPredicted RBP5.3□□□□□ -1.56
CHD7-205ENST00000527825 ZC3H12CQ9C0D7 883 aaKnown RBP5.3□□□□□ -1.56
CHD7-205ENST00000527825 FKBPLQ9UIM3 349 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 ZMYND8Q9ULU4 1186 aaPredicted RBP5.3□□□□□ -1.56
CHD7-205ENST00000527825 HTTP42858 3142 aa5.3□□□□□ -1.56
CHD7-205ENST00000527825 MAP3K15Q6ZN16 1313 aa5.29□□□□□ -1.56
CHD7-205ENST00000527825 GNAT3A8MTJ3 354 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms