RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 SEC31BQ9NQW1 1179 aa10.55□□□□□ -0.72
USP48-212ENST00000527823 TRIM17Q9Y577 477 aa10.55□□□□□ -0.72
USP48-212ENST00000527823 NDUFB9Q9Y6M9 179 aa10.55□□□□□ -0.72
USP48-212ENST00000527823 ARAP2Q8WZ64 1704 aa10.55□□□□□ -0.72
USP48-212ENST00000527823 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
USP48-212ENST00000527823 RAD21O60216 631 aa10.54□□□□□ -0.72
USP48-212ENST00000527823 NEFMP07197 916 aa10.54□□□□□ -0.72
USP48-212ENST00000527823 CAP1Q01518 475 aa10.54□□□□□ -0.72
USP48-212ENST00000527823 GGA1Q9UJY5 639 aa10.54□□□□□ -0.72
USP48-212ENST00000527823 MED23Q9ULK4 1368 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 IGF2BP3O00425 579 aaKnown RBP eCLIP10.53□□□□□ -0.72
USP48-212ENST00000527823 WNT10BO00744 389 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 IRS4O14654 1257 aaPredicted RBP10.53□□□□□ -0.72
USP48-212ENST00000527823 ZBTB24O43167 697 aaPredicted RBP10.53□□□□□ -0.72
USP48-212ENST00000527823 SASH1O94885 1247 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 ABL2P42684 1182 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 RPS8P62241 208 aaKnown RBP10.53□□□□□ -0.72
USP48-212ENST00000527823 PTPN12Q05209 780 aaKnown RBP10.53□□□□□ -0.72
USP48-212ENST00000527823 SPRYD7Q5W111 196 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 PLBD2Q8NHP8 589 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 ARMC5Q96C12 935 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 MXD3Q9BW11 206 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 PRM3Q9NNZ6 103 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 ANKIB1Q9P2G1 1089 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 FKBPLQ9UIM3 349 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 FZD1Q9UP38 647 aa10.53□□□□□ -0.72
USP48-212ENST00000527823 USP17L3A6NCW0 530 aa10.52□□□□□ -0.73
USP48-212ENST00000527823 USP17L4A6NCW7 530 aa10.52□□□□□ -0.73
USP48-212ENST00000527823 GPR37L1O60883 481 aa10.52□□□□□ -0.73
USP48-212ENST00000527823 EN2P19622 333 aaPredicted RBP10.52□□□□□ -0.73
USP48-212ENST00000527823 LIAT1Q6ZQX7 453 aa10.52□□□□□ -0.73
USP48-212ENST00000527823 USP17L1Q7RTZ2 530 aa10.52□□□□□ -0.73
USP48-212ENST00000527823 BAP1Q92560 729 aa10.52□□□□□ -0.73
USP48-212ENST00000527823 EMID1Q96A84 441 aaPredicted RBP10.52□□□□□ -0.73
USP48-212ENST00000527823 XDHP47989 1333 aa10.52□□□□□ -0.73
USP48-212ENST00000527823 WTIPA6NIX2 430 aaPredicted RBP10.51□□□□□ -0.73
USP48-212ENST00000527823 PRKG1Q13976 671 aa10.51□□□□□ -0.73
USP48-212ENST00000527823 LINC01559Q495D7 138 aa10.51□□□□□ -0.73
USP48-212ENST00000527823 DACT2Q5SW24 774 aa10.51□□□□□ -0.73
USP48-212ENST00000527823 LDLRAD1Q5T700 205 aa10.51□□□□□ -0.73
USP48-212ENST00000527823 INTS3Q68E01 1043 aaKnown RBP10.51□□□□□ -0.73
USP48-212ENST00000527823 CD99L2Q8TCZ2 262 aa10.51□□□□□ -0.73
USP48-212ENST00000527823 ZMYND15Q9H091 742 aa10.51□□□□□ -0.73
USP48-212ENST00000527823 BABAM1Q9NWV8 329 aa10.51□□□□□ -0.73
USP48-212ENST00000527823 PTPN22Q9Y2R2 807 aa10.51□□□□□ -0.73
USP48-212ENST00000527823 A0A0C4DFX4 3053 aa10.5□□□□□ -0.73
USP48-212ENST00000527823 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
USP48-212ENST00000527823 NF2P35240 595 aa10.5□□□□□ -0.73
USP48-212ENST00000527823 HDGFL1Q5TGJ6 251 aa10.5□□□□□ -0.73
USP48-212ENST00000527823 CCDC85AQ96PX6 553 aaPredicted RBP10.5□□□□□ -0.73
USP48-212ENST00000527823 ANGEL1Q9UNK9 670 aaKnown RBP10.5□□□□□ -0.73
USP48-212ENST00000527823 MANSC4A6NHS7 340 aaPredicted RBP10.49□□□□□ -0.73
USP48-212ENST00000527823 SLC19A1P41440 591 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 RIPK4P57078 832 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 TRIM32Q13049 653 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 TRIM28Q13263 835 aaKnown RBP10.49□□□□□ -0.73
USP48-212ENST00000527823 CRHR2Q13324 411 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 ARMC9Q7Z3E5 817 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 PODNQ7Z5L7 613 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 APOBEC3FQ8IUX4 373 aaKnown RBP10.49□□□□□ -0.73
USP48-212ENST00000527823 ZBTB38Q8NAP3 1195 aaPredicted RBP10.49□□□□□ -0.73
USP48-212ENST00000527823 PNMA1Q8ND90 353 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 ARMC2Q8NEN0 867 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 CCER1Q8TC90 406 aaPredicted RBP10.49□□□□□ -0.73
USP48-212ENST00000527823 ZBED3Q96IU2 234 aaPredicted RBP10.49□□□□□ -0.73
USP48-212ENST00000527823 WNK4Q96J92 1243 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 ZNF333Q96JL9 665 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 CLMNQ96JQ2 1002 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 MYO3BQ8WXR4 1341 aa10.49□□□□□ -0.73
USP48-212ENST00000527823 ZBTB48P10074 688 aaPredicted RBP10.48□□□□□ -0.73
USP48-212ENST00000527823 ATP2B4P23634 1241 aa10.48□□□□□ -0.73
USP48-212ENST00000527823 IRF5Q13568 498 aa10.48□□□□□ -0.73
USP48-212ENST00000527823 MAP3K11Q16584 847 aa10.48□□□□□ -0.73
USP48-212ENST00000527823 CCDC152Q4G0S7 254 aa10.48□□□□□ -0.73
USP48-212ENST00000527823 ERO1AQ96HE7 468 aa10.48□□□□□ -0.73
USP48-212ENST00000527823 A6NJR5 290 aa10.47□□□□□ -0.73
USP48-212ENST00000527823 CHL1O00533 1208 aa10.47□□□□□ -0.73
USP48-212ENST00000527823 HOXB7P09629 217 aa10.47□□□□□ -0.73
USP48-212ENST00000527823 KLRK1P26718 216 aa10.47□□□□□ -0.73
USP48-212ENST00000527823 TMPOP42166 694 aaKnown RBP10.47□□□□□ -0.73
USP48-212ENST00000527823 RPIAP49247 311 aa10.47□□□□□ -0.73
USP48-212ENST00000527823 ERICH6Q7L0X2 663 aa10.47□□□□□ -0.73
USP48-212ENST00000527823 DBF4Q9UBU7 674 aaPredicted RBP10.47□□□□□ -0.73
USP48-212ENST00000527823 ALPK3Q96L96 1907 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 UNC80Q8N2C7 3258 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 H0YGN5 161 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 PDE8AO60658 829 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 CD2BP2O95400 341 aaKnown RBP10.46□□□□□ -0.73
USP48-212ENST00000527823 PCCAP05165 728 aaPredicted RBP10.46□□□□□ -0.73
USP48-212ENST00000527823 SH3BP2P78314 561 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 LMOD3Q0VAK6 560 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 STRIP1Q5VSL9 837 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 TXNRD3Q86VQ6 643 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 KIAA0825Q8IV33 1275 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 ANKRD18AQ8IVF6 992 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 OGFOD1Q8N543 542 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 ZNF511Q8NB15 262 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 JARID2Q92833 1246 aaPredicted RBP10.46□□□□□ -0.73
USP48-212ENST00000527823 PRKD2Q9BZL6 878 aa10.46□□□□□ -0.73
USP48-212ENST00000527823 EFCC1Q9HA90 598 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms