RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 RNF214Q8ND24 703 aa20.19■□□□□ 0.82
PCDHA6-202ENST00000527624 PHKBQ93100 1093 aa20.18■□□□□ 0.82
PCDHA6-202ENST00000527624 BRIP1Q9BX63 1249 aa20.18■□□□□ 0.82
PCDHA6-202ENST00000527624 MYH13Q9UKX3 1938 aa20.18■□□□□ 0.82
PCDHA6-202ENST00000527624 LIG1P18858 919 aa20.18■□□□□ 0.82
PCDHA6-202ENST00000527624 ZNF804AQ7Z570 1209 aa20.18■□□□□ 0.82
PCDHA6-202ENST00000527624 CFAP45Q9UL16 551 aa20.18■□□□□ 0.82
PCDHA6-202ENST00000527624 CHD4Q14839 1912 aa20.18■□□□□ 0.82
PCDHA6-202ENST00000527624 EVX2Q03828 476 aa20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 WTAPQ15007 396 aa20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 SART3Q15020 963 aaKnown RBP20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 TDRD7Q8NHU6 1098 aaKnown RBP20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 PGBD1Q96JS3 809 aa20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 AIFM3Q96NN9 605 aa20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 ANAPC4Q9UJX5 808 aa20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 USP17L12C9JPN9 530 aa20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 USP17L21D6R901 530 aa20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 PRDM1O75626 825 aa20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 CTR9Q6PD62 1173 aa20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 FBXO18Q8NFZ0 1043 aa20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 FAM217BQ9NTX9 383 aaPredicted RBP20.17■□□□□ 0.82
PCDHA6-202ENST00000527624 ERICH2A1L162 156 aa20.16■□□□□ 0.82
PCDHA6-202ENST00000527624 GIMAP6Q6P9H5 292 aa20.16■□□□□ 0.82
PCDHA6-202ENST00000527624 USP28Q96RU2 1077 aa20.16■□□□□ 0.82
PCDHA6-202ENST00000527624 UBAC1Q9BSL1 405 aa20.16■□□□□ 0.82
PCDHA6-202ENST00000527624 CRNKL1Q9BZJ0 848 aaKnown RBP20.16■□□□□ 0.82
PCDHA6-202ENST00000527624 CDKL5O76039 1030 aa20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 LETM1O95202 739 aaPredicted RBP20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 GRIK5Q16478 980 aa20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 SPTY2D1Q68D10 685 aaPredicted RBP20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 CPLX2Q6PUV4 134 aaKnown RBP20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 GGA1Q9UJY5 639 aa20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 LDHBP07195 334 aaKnown RBP20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 SYNE3Q6ZMZ3 975 aa20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 WDR66Q8TBY9 1149 aa20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 BICD2Q8TD16 824 aa20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 ESR2Q92731 530 aa20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 AKT1S1Q96B36 256 aa20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 DCP1AQ9NPI6 582 aaPredicted RBP20.15■□□□□ 0.82
PCDHA6-202ENST00000527624 PLSCR1O15162 318 aa20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 RANBP6O60518 1105 aaKnown RBP20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 BBOX1O75936 387 aa20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 HOXA10P31260 410 aaPredicted RBP20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 NTRK3Q16288 839 aa20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 ALG1Q9BT22 464 aa20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 BAZ2AQ9UIF9 1905 aaKnown RBP20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 UBE2Q2LH0YL09 131 aa20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 POLR3DP05423 398 aaPredicted RBP20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 ATP2B4P23634 1241 aa20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 MSNP26038 577 aaKnown RBP20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 DIXDC1Q155Q3 683 aa20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 ZNF396Q96N95 335 aaPredicted RBP20.14■□□□□ 0.81
PCDHA6-202ENST00000527624 TNKSO95271 1327 aa20.13■□□□□ 0.81
PCDHA6-202ENST00000527624 CYP2D6P10635 497 aa20.13■□□□□ 0.81
PCDHA6-202ENST00000527624 IARSP41252 1262 aaKnown RBP20.13■□□□□ 0.81
PCDHA6-202ENST00000527624 SLC4A8Q2Y0W8 1093 aa20.13■□□□□ 0.81
PCDHA6-202ENST00000527624 DACT1Q9NYF0 836 aa20.13■□□□□ 0.81
PCDHA6-202ENST00000527624 POLLQ9UGP5 575 aa20.13■□□□□ 0.81
PCDHA6-202ENST00000527624 NOL7Q9UMY1 257 aaKnown RBP20.13■□□□□ 0.81
PCDHA6-202ENST00000527624 CAMK4Q16566 473 aa20.12■□□□□ 0.81
PCDHA6-202ENST00000527624 C15orf52Q6ZUT6 534 aaKnown RBP20.12■□□□□ 0.81
PCDHA6-202ENST00000527624 NUP133Q8WUM0 1156 aa20.12■□□□□ 0.81
PCDHA6-202ENST00000527624 CRAMP1Q96RY5 1269 aa20.12■□□□□ 0.81
PCDHA6-202ENST00000527624 CD209Q9NNX6 404 aa20.12■□□□□ 0.81
PCDHA6-202ENST00000527624 KIF28PB7ZC32 967 aa20.12■□□□□ 0.81
PCDHA6-202ENST00000527624 KLHL34Q8N239 644 aa20.12■□□□□ 0.81
PCDHA6-202ENST00000527624 SLC26A6Q9BXS9 759 aa20.12■□□□□ 0.81
PCDHA6-202ENST00000527624 RCOR1Q9UKL0 485 aa20.12■□□□□ 0.81
PCDHA6-202ENST00000527624 KLRG2A4D1S0 409 aaPredicted RBP20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 RTN1Q16799 776 aa20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 NLGN1Q8N2Q7 840 aa20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 TBC1D16Q8TBP0 767 aa20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 NAP1L5Q96NT1 182 aaPredicted RBP20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 ATP8A2Q9NTI2 1148 aa20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 C6orf229H3BNL8 230 aa20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 ZBTB22O15209 634 aa20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 ZNF654Q8IZM8 581 aa20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 CMTR1Q8N1G2 835 aaKnown RBP20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 CCDC82Q8N4S0 544 aa20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 NUP62CLQ9H1M0 184 aa20.11■□□□□ 0.81
PCDHA6-202ENST00000527624 DUOX1Q9NRD9 1551 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 MAST2Q6P0Q8 1798 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 PPEF1O14829 653 aaPredicted RBP20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 NR1I2O75469 434 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 RXRBP28702 533 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 KIF23Q02241 960 aaPredicted RBP20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 SEC23AQ15436 765 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 MSL1Q68DK7 614 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 TMTC2Q8N394 836 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 ENAHQ8N8S7 591 aaPredicted RBP20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 ZSCAN10Q96SZ4 725 aaPredicted RBP20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 MTA3Q9BTC8 594 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 HMGB2P26583 209 aaKnown RBP20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 SSRP1Q08945 709 aaKnown RBP20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 UVSSAQ2YD98 709 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 KRT40Q6A162 431 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 ATL3Q6DD88 541 aa20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 SH3RF3Q8TEJ3 882 aaPredicted RBP20.1■□□□□ 0.81
PCDHA6-202ENST00000527624 MCM9Q9NXL9 1143 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms