RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 PHF20L1A8MW92 1017 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 GAKO14976 1311 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 GRK4P32298 578 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 MAP3K10Q02779 954 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 MTFR1Q15390 333 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 PDS5AQ29RF7 1337 aaKnown RBP13.26□□□□□ -0.29
VPS26B-203ENST00000525918 ATRNL1Q5VV63 1379 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 SPTY2D1Q68D10 685 aaPredicted RBP13.26□□□□□ -0.29
VPS26B-203ENST00000525918 GPAT2Q6NUI2 795 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 FASTKD5Q7L8L6 764 aaKnown RBP13.26□□□□□ -0.29
VPS26B-203ENST00000525918 SCYL3Q8IZE3 742 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 NKX2-3Q8TAU0 364 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 FAM163AQ96GL9 167 aaPredicted RBP13.26□□□□□ -0.29
VPS26B-203ENST00000525918 PICK1Q9NRD5 415 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 ZHX2Q9Y6X8 837 aa13.26□□□□□ -0.29
VPS26B-203ENST00000525918 MYPNQ86TC9 1320 aa13.25□□□□□ -0.29
VPS26B-203ENST00000525918 A0A0G2JLL6 359 aaPredicted RBP13.25□□□□□ -0.29
VPS26B-203ENST00000525918 BCRP11274 1271 aa13.25□□□□□ -0.29
VPS26B-203ENST00000525918 PTPRAP18433 802 aa13.25□□□□□ -0.29
VPS26B-203ENST00000525918 ADORA1P30542 326 aa13.25□□□□□ -0.29
VPS26B-203ENST00000525918 TIMM10P62072 90 aa13.25□□□□□ -0.29
VPS26B-203ENST00000525918 RASGRF1Q13972 1273 aa13.25□□□□□ -0.29
VPS26B-203ENST00000525918 PRRT2Q7Z6L0 340 aaPredicted RBP13.25□□□□□ -0.29
VPS26B-203ENST00000525918 DZIP1Q86YF9 867 aaKnown RBP13.25□□□□□ -0.29
VPS26B-203ENST00000525918 ZSCAN29Q8IWY8 852 aaPredicted RBP13.25□□□□□ -0.29
VPS26B-203ENST00000525918 ABCF2Q9UG63 623 aa13.25□□□□□ -0.29
VPS26B-203ENST00000525918 AKAP2Q9Y2D5 859 aa13.25□□□□□ -0.29
VPS26B-203ENST00000525918 AFG3L2Q9Y4W6 797 aa13.25□□□□□ -0.29
VPS26B-203ENST00000525918 CTNND1O60716 968 aaKnown RBP13.24□□□□□ -0.29
VPS26B-203ENST00000525918 CYP2C8P10632 490 aa13.24□□□□□ -0.29
VPS26B-203ENST00000525918 FCGRTP55899 365 aa13.24□□□□□ -0.29
VPS26B-203ENST00000525918 MEIS3Q99687 375 aa13.24□□□□□ -0.29
VPS26B-203ENST00000525918 COLQQ9Y215 455 aaPredicted RBP13.24□□□□□ -0.29
VPS26B-203ENST00000525918 SLC45A1Q9Y2W3 748 aa13.24□□□□□ -0.29
VPS26B-203ENST00000525918 RFX7Q2KHR2 1363 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 A0A1B0GUL7 405 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 DDTLA6NHG4 134 aaPredicted RBP13.23□□□□□ -0.29
VPS26B-203ENST00000525918 GJB1P08034 283 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 GNAI3P08754 354 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 CCL5P13501 91 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 GJA8P48165 433 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 FXR1P51114 621 aaKnown RBP eCLIP13.23□□□□□ -0.29
VPS26B-203ENST00000525918 UBXN2AP68543 259 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 MVPQ14764 893 aaKnown RBP13.23□□□□□ -0.29
VPS26B-203ENST00000525918 SH3BP5LQ7L8J4 393 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 ARHGAP45Q92619 1136 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 SHISA4Q96DD7 197 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 XAGE2Q96GT9 111 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 BIN2Q9UBW5 565 aaPredicted RBP13.23□□□□□ -0.29
VPS26B-203ENST00000525918 ATAD5Q96QE3 1844 aa13.23□□□□□ -0.29
VPS26B-203ENST00000525918 MROH7-TTC4A0A0A0MT08 1334 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 GPR75-ASB3A0A0A6YYF3 556 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 H0YGN5 161 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 SRGAP3O43295 1099 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 BTDP43251 543 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 MECOMQ03112 1051 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 PRKCZQ05513 592 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 TFCP2Q12800 502 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 PICALMQ13492 652 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 MTX1Q13505 466 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 GADL1Q6ZQY3 521 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 ERICH6Q7L0X2 663 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 RNF208Q9H0X6 261 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
VPS26B-203ENST00000525918 DOCK3Q8IZD9 2030 aa13.22□□□□□ -0.29
VPS26B-203ENST00000525918 TBC1D12O60347 775 aa13.21□□□□□ -0.29
VPS26B-203ENST00000525918 MAP4K4O95819 1239 aaPredicted RBP13.21□□□□□ -0.29
VPS26B-203ENST00000525918 RARSP54136 660 aaKnown RBP13.21□□□□□ -0.29
VPS26B-203ENST00000525918 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.29
VPS26B-203ENST00000525918 DPF3Q92784 378 aa13.21□□□□□ -0.29
VPS26B-203ENST00000525918 NEUROD6Q96NK8 337 aa13.21□□□□□ -0.29
VPS26B-203ENST00000525918 GABRQQ9UN88 632 aa13.21□□□□□ -0.29
VPS26B-203ENST00000525918 CEP290O15078 2479 aa13.2□□□□□ -0.3
VPS26B-203ENST00000525918 TRIM75PA6NK02 468 aa13.2□□□□□ -0.3
VPS26B-203ENST00000525918 ADCY3O60266 1144 aa13.2□□□□□ -0.3
VPS26B-203ENST00000525918 LDHCP07864 332 aa13.2□□□□□ -0.3
VPS26B-203ENST00000525918 SLURP2P0DP57 97 aa13.2□□□□□ -0.3
VPS26B-203ENST00000525918 FLT3LGP49771 235 aa13.2□□□□□ -0.3
VPS26B-203ENST00000525918 RHBDL3P58872 404 aa13.2□□□□□ -0.3
VPS26B-203ENST00000525918 GSTO1P78417 241 aa13.2□□□□□ -0.3
VPS26B-203ENST00000525918 HTATIP2Q9BUP3 242 aa13.2□□□□□ -0.3
VPS26B-203ENST00000525918 TNPO2O14787 897 aaKnown RBP13.19□□□□□ -0.3
VPS26B-203ENST00000525918 CAPN2P17655 700 aa13.19□□□□□ -0.3
VPS26B-203ENST00000525918 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
VPS26B-203ENST00000525918 UBE2Q1Q7Z7E8 422 aa13.19□□□□□ -0.3
VPS26B-203ENST00000525918 SPATA5Q8NB90 893 aa13.19□□□□□ -0.3
VPS26B-203ENST00000525918 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
VPS26B-203ENST00000525918 ZNF384Q8TF68 577 aa13.19□□□□□ -0.3
VPS26B-203ENST00000525918 U2AF1L4Q8WU68 220 aaKnown RBP13.19□□□□□ -0.3
VPS26B-203ENST00000525918 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
VPS26B-203ENST00000525918 OSBPL5Q9H0X9 879 aaPredicted RBP13.19□□□□□ -0.3
VPS26B-203ENST00000525918 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
VPS26B-203ENST00000525918 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
VPS26B-203ENST00000525918 AGTPBP1Q9UPW5 1226 aa13.19□□□□□ -0.3
VPS26B-203ENST00000525918 LOC285556D6RIA3 1793 aa13.19□□□□□ -0.3
VPS26B-203ENST00000525918 COL2A1P02458 1487 aaPredicted RBP13.18□□□□□ -0.3
VPS26B-203ENST00000525918 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
VPS26B-203ENST00000525918 SGPL1O95470 568 aa13.18□□□□□ -0.3
VPS26B-203ENST00000525918 IRF5Q13568 498 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms