RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 TNNT2P45379 298 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 ARSDP51689 593 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 SIK1P57059 783 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 DNM1Q05193 864 aaKnown RBP7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 LINC00116Q8NCU8 138 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 GPR152Q8TDT2 470 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 PIK3R5Q8WYR1 880 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 EDEM1Q92611 657 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 CITED4Q96RK1 184 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 PCDHGC4Q9Y5F7 938 aa7.22□□□□□ -1.25
CTNNA1-239ENST00000523685 TYRO3Q06418 890 aa7.21□□□□□ -1.26
CTNNA1-239ENST00000523685 UBAP2LQ14157 1087 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-239ENST00000523685 ZSCAN29Q8IWY8 852 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-239ENST00000523685 ASAP1Q9ULH1 1129 aa7.21□□□□□ -1.26
CTNNA1-239ENST00000523685 POLIQ9UNA4 740 aa7.21□□□□□ -1.26
CTNNA1-239ENST00000523685 C5P01031 1676 aa7.21□□□□□ -1.26
CTNNA1-239ENST00000523685 COL24A1Q17RW2 1714 aa7.21□□□□□ -1.26
CTNNA1-239ENST00000523685 PDGFAP04085 211 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 RPLP1P05386 114 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 MMP10P09238 476 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 FAM157BP0CG42 384 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 EPB42P16452 691 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 USP5P45974 858 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 ITPK1Q13572 414 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 RGL4Q8IZJ4 473 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 TTC16Q8NEE8 873 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 ZNF837Q96EG3 531 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 RBCK1Q9BYM8 510 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 BRD7Q9NPI1 651 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 RTCBQ9Y3I0 505 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 KIF24Q5T7B8 1368 aa7.2□□□□□ -1.26
CTNNA1-239ENST00000523685 C4BP0C0L5 1744 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 KHNYNO15037 678 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 PHKG2P15735 406 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 HSPA6P17066 643 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 ERCC3P19447 782 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 TNP2Q05952 138 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 ZNF787Q6DD87 383 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 FOXR1Q6PIV2 292 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 DNAJC14Q6Y2X3 702 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 IFNL2Q8IZJ0 200 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 CMTR1Q8N1G2 835 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 VWA5B2Q8N398 1253 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 GTPBP3Q969Y2 492 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 ASB16Q96NS5 453 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 ATG3Q9NT62 314 aa7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 NXF1Q9UBU9 619 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-239ENST00000523685 TOGARAM1Q9Y4F4 1720 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 A0A0G2JLW4 131 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 CDC14CA4D256 554 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 EFSO43281 561 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 BNIP3LO60238 219 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 TRAPPC3LQ5T215 181 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 ARHGAP27Q6ZUM4 889 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 SV2AQ7L0J3 742 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 RGS22Q8NE09 1264 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 NANOS1Q8WY41 292 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 NDFIP2Q9NV92 336 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 POLKQ9UBT6 870 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 KCNH4Q9UQ05 1017 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 FNDC3AQ9Y2H6 1198 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 USP20Q9Y2K6 914 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 WASHC2AQ641Q2 1341 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 ADCY9O60503 1353 aa7.18□□□□□ -1.26
CTNNA1-239ENST00000523685 KIF20BQ96Q89 1820 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 DCDC2BA2VCK2 349 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 ANKRD33BA6NCL7 494 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 MAPTP10636 758 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 SFSWAPQ12872 951 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 LAMC2Q13753 1193 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 EIF4A2Q14240 407 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 C8orf34Q49A92 452 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 GJD3Q8N144 294 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 TRERF1Q96PN7 1200 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 CFHR5Q9BXR6 569 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 C11orf16Q9NQ32 467 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 ATXN7L1Q9ULK2 861 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 PHF24Q9UPV7 400 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 KCNMB2Q9Y691 235 aa7.17□□□□□ -1.26
CTNNA1-239ENST00000523685 TAF1LQ8IZX4 1826 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 DPEP1P16444 411 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 GRNP28799 593 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 RFC4P35249 363 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 CABP4P57796 275 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 EHHADHQ08426 723 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 ZNF530Q6P9A1 599 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 TMC7Q7Z402 723 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 NPAS3Q8IXF0 933 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 NLGN1Q8N2Q7 840 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 ABHD17AQ96GS6 310 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 DMRTB1Q96MA1 342 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 FAM129BQ96TA1 746 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 MARK1Q9P0L2 795 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 CEP350Q5VT06 3117 aa7.16□□□□□ -1.26
CTNNA1-239ENST00000523685 PKD1L3Q7Z443 1732 aa7.15□□□□□ -1.26
CTNNA1-239ENST00000523685 ITGB4P16144 1822 aa7.15□□□□□ -1.26
CTNNA1-239ENST00000523685 HSP90AB1P08238 724 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-239ENST00000523685 TGFB2P61812 414 aa7.15□□□□□ -1.26
CTNNA1-239ENST00000523685 PLEKHO1Q53GL0 409 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-239ENST00000523685 NCAPD2Q15021 1401 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms