RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	AKAP4	Q5JQC9	854 aa		7.32	□□□□□ -1.24
CTNNA1-222	ENST00000520400	PPM1J	Q5JR12	505 aa		7.32	□□□□□ -1.24
CTNNA1-222	ENST00000520400	EXOSC6	Q5RKV6	272 aa	Known RBP	7.32	□□□□□ -1.24
CTNNA1-222	ENST00000520400	CYFIP1	Q7L576	1253 aa		7.32	□□□□□ -1.24
CTNNA1-222	ENST00000520400	LENG1	Q96BZ8	264 aa	Predicted RBP	7.32	□□□□□ -1.24
CTNNA1-222	ENST00000520400	ACSBG1	Q96GR2	724 aa		7.32	□□□□□ -1.24
CTNNA1-222	ENST00000520400	MRPL18	Q9H0U6	180 aa	Known RBP	7.32	□□□□□ -1.24
CTNNA1-222	ENST00000520400	PPT2	Q9UMR5	302 aa		7.32	□□□□□ -1.24
CTNNA1-222	ENST00000520400	ITGB2	P05107	769 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	NEFM	P07197	916 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	ADH5	P11766	374 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	CHRNA4	P43681	627 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	PREP	P48147	710 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	SOX9	P48436	509 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	PRRT3	Q5FWE3	981 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	CCDC81	Q6ZN84	652 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400		Q6ZS46	218 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	TMEM130	Q8N3G9	435 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	NKD1	Q969G9	470 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	UBL7	Q96S82	380 aa	Predicted RBP	7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	ANTXR1	Q9H6X2	564 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	DISC1	Q9NRI5	854 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	NOP53	Q9NZM5	478 aa	Known RBP	7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	CRIM1	Q9NZV1	1036 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	STK17A	Q9UEE5	414 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	PRKAG2	Q9UGJ0	569 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	HIF3A	Q9Y2N7	669 aa		7.31	□□□□□ -1.24
CTNNA1-222	ENST00000520400	MBTPS1	Q14703	1052 aa		7.3	□□□□□ -1.24
CTNNA1-222	ENST00000520400	SCARA3	Q6AZY7	606 aa		7.3	□□□□□ -1.24
CTNNA1-222	ENST00000520400	SMG8	Q8ND04	991 aa	Known RBP	7.3	□□□□□ -1.24
CTNNA1-222	ENST00000520400	SREK1	Q8WXA9	508 aa	Known RBP	7.3	□□□□□ -1.24
CTNNA1-222	ENST00000520400	SCARF2	Q96GP6	870 aa	Predicted RBP	7.3	□□□□□ -1.24
CTNNA1-222	ENST00000520400	SUGCT	Q9HAC7	445 aa		7.3	□□□□□ -1.24
CTNNA1-222	ENST00000520400	SPDYE3	A6NKU9	549 aa		7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	LMNB1	P20700	586 aa		7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	IREB2	P48200	963 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	ARID5A	Q03989	594 aa		7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	WFDC12	Q8WWY7	111 aa		7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	DHX38	Q92620	1227 aa	Known RBP	7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	MEGF10	Q96KG7	1140 aa		7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	FANCD2OS	Q96PS1	177 aa		7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	TANGO6	Q9C0B7	1094 aa		7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	RNF208	Q9H0X6	261 aa		7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	GSX1	Q9H4S2	264 aa	Predicted RBP	7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	ACTL7B	Q9Y614	415 aa		7.29	□□□□□ -1.24
CTNNA1-222	ENST00000520400	ID3	Q02535	119 aa		7.28	□□□□□ -1.24
CTNNA1-222	ENST00000520400	SOX4	Q06945	474 aa	Predicted RBP	7.28	□□□□□ -1.24
CTNNA1-222	ENST00000520400	ADGRE1	Q14246	886 aa		7.28	□□□□□ -1.24
CTNNA1-222	ENST00000520400	GK5	Q6ZS86	529 aa		7.28	□□□□□ -1.24
CTNNA1-222	ENST00000520400	FAM169B	Q8N8A8	192 aa		7.28	□□□□□ -1.24
CTNNA1-222	ENST00000520400	DCAF5	Q96JK2	942 aa		7.28	□□□□□ -1.24
CTNNA1-222	ENST00000520400	AKTIP	Q9H8T0	292 aa		7.28	□□□□□ -1.24
CTNNA1-222	ENST00000520400	FBRS	Q9HAH7	460 aa		7.28	□□□□□ -1.24
CTNNA1-222	ENST00000520400	FAM105A	Q9NUU6	356 aa		7.28	□□□□□ -1.24
CTNNA1-222	ENST00000520400	ROBO2	Q9HCK4	1378 aa		7.28	□□□□□ -1.24
CTNNA1-222	ENST00000520400	PRAMEF27	A3QJZ7	478 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	TTLL4	Q14679	1199 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	CWF19L2	Q2TBE0	894 aa	Known RBP	7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	NUTM2G	Q5VZR2	741 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	CD163	Q86VB7	1156 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	C12orf50	Q8NA57	414 aa	Predicted RBP	7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	SHD	Q96IW2	340 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	SEC16B	Q96JE7	1060 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	RAD18	Q9NS91	495 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	USP21	Q9UK80	565 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	AP4E1	Q9UPM8	1137 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	PCDHB14	Q9Y5E9	798 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	MRVI1	Q9Y6F6	885 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	SYNGAP1	Q96PV0	1343 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	PRR36	Q9H6K5	1346 aa		7.27	□□□□□ -1.25
CTNNA1-222	ENST00000520400	PIK3R2	O00459	728 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	HTR3B	O95264	441 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	HCLS1	P14317	486 aa	Predicted RBP	7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	GRK4	P32298	578 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	MCM4	P33991	863 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	ETFB	P38117	255 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	ERVK-24	P63145	666 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	NRG1	Q02297	640 aa	Predicted RBP	7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	NKG7	Q16617	165 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	ZBTB37	Q5TC79	503 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	CDPF1	Q6NVV7	123 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	FAM46A	Q96IP4	442 aa	Known RBP	7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	EHMT1	Q9H9B1	1298 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	USP35	Q9P2H5	1018 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	SNCAIP	Q9Y6H5	919 aa		7.26	□□□□□ -1.25
CTNNA1-222	ENST00000520400	C1QTNF9B	B2RNN3	333 aa		7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	DYNC1LI2	O43237	492 aa	Predicted RBP	7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	EIF4EBP3	O60516	100 aa	Predicted RBP	7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	ATE1	O95260	518 aa		7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	BPNT1	O95861	308 aa		7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	GLB1	P16278	677 aa		7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	GNL2	Q13823	731 aa	Known RBP	7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	RUFY4	Q6ZNE9	571 aa		7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	DYM	Q7RTS9	669 aa		7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	HDX	Q7Z353	690 aa		7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	REXO1	Q8N1G1	1221 aa	Known RBP	7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	ARMC10	Q8N2F6	343 aa		7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	ISL2	Q96A47	359 aa		7.25	□□□□□ -1.25
CTNNA1-222	ENST00000520400	ELMO3	Q96BJ8	720 aa		7.25	□□□□□ -1.25

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