RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ZNF587Q96SQ5 575 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 CCDC86Q9H6F5 360 aaKnown RBP7.84□□□□□ -1.15
HMGB1P46-201ENST00000520062 TM4SF5O14894 197 aa7.83□□□□□ -1.16
HMGB1P46-201ENST00000520062 SELPP16109 830 aa7.83□□□□□ -1.16
HMGB1P46-201ENST00000520062 HSD3B2P26439 372 aa7.83□□□□□ -1.16
HMGB1P46-201ENST00000520062 MLECQ14165 292 aa7.83□□□□□ -1.16
HMGB1P46-201ENST00000520062 WIPI1Q5MNZ9 446 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P46-201ENST00000520062 ILDR2Q71H61 639 aa7.83□□□□□ -1.16
HMGB1P46-201ENST00000520062 TAB3Q8N5C8 712 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P46-201ENST00000520062 SLC16A10Q8TF71 515 aa7.83□□□□□ -1.16
HMGB1P46-201ENST00000520062 TM9SF2Q99805 663 aa7.83□□□□□ -1.16
HMGB1P46-201ENST00000520062 SYNGAP1Q96PV0 1343 aa7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 ANKRD62A6NC57 917 aa7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 ENPP3O14638 875 aa7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 HTR3BO95264 441 aa7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 ADAMTS2O95450 1211 aa7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 FXNQ16595 210 aa7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 KIF4BQ2VIQ3 1234 aa7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 LRFN4Q6PJG9 635 aa7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 C1orf229Q6ZS94 237 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 CELF2-AS1Q8N7Q2 184 aa7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 PLPPR2Q96GM1 343 aa7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 MRPL42Q9Y6G3 142 aaKnown RBP7.82□□□□□ -1.16
HMGB1P46-201ENST00000520062 TERTO14746 1132 aaKnown RBP7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 OIP5O43482 229 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 ZNF862O60290 1169 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 GRIN3BO60391 1043 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 ECEL1O95672 775 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 PDE4BQ07343 736 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 SETDB1Q15047 1291 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 CYFIP1Q7L576 1253 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 DTWD1Q8N5C7 304 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 GALNT6Q8NCL4 622 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 TMEM40Q8WWA1 233 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 IRF7Q92985 503 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 KLHDC7BQ96G42 594 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 BTBD6Q96KE9 485 aa7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 ZC3H12CQ9C0D7 883 aaKnown RBP7.81□□□□□ -1.16
HMGB1P46-201ENST00000520062 FAM221BA6H8Z2 402 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 CLSTN1O94985 981 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 SLURP2P0DP57 97 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 GUCY2CP25092 1073 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 CDK8P49336 464 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 KRT76Q01546 638 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 RASGRF1Q13972 1273 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 PDE3AQ14432 1141 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 INPP5AQ14642 412 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 TMEM201Q5SNT2 666 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 ELMO3Q96BJ8 720 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 CARD10Q9BWT7 1032 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 GMIPQ9P107 970 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 MAPK8IP1Q9UQF2 711 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 SLC12A7Q9Y666 1083 aa7.8□□□□□ -1.16
HMGB1P46-201ENST00000520062 ERBB4Q15303 1308 aa7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 LOC100289279A0A1B0GTE1 492 aa7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 CTSBP07858 339 aa7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 BCRP11274 1271 aa7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 NID1P14543 1247 aa7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 TCEAL1Q15170 157 aa7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 ZC3H12AQ5D1E8 599 aaKnown RBP7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 C8orf86Q6ZUL3 223 aa7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 RNPC3Q96LT9 517 aaKnown RBP7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 TNKS2Q9H2K2 1166 aa7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 ADAM30Q9UKF2 790 aa7.79□□□□□ -1.16
HMGB1P46-201ENST00000520062 A0A1W2PQH9 124 aa7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 PDPK1O15530 556 aa7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 SLFN14P0C7P3 912 aa7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 IFRD2Q12894 506 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 COL9A3Q14050 684 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 LARP1BQ659C4 914 aaKnown RBP7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 INTS3Q68E01 1043 aaKnown RBP7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 ZNF662Q6ZS27 426 aa7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 GALNT11Q8NCW6 608 aa7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 USP26Q9BXU7 913 aa7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 REV1Q9UBZ9 1251 aa7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 SBNO2Q9Y2G9 1366 aa7.78□□□□□ -1.16
HMGB1P46-201ENST00000520062 LIG1P18858 919 aa7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 CD68P34810 354 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 NLRP12P59046 1061 aa7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 RING1Q06587 406 aa7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 PPP2R5EQ16537 467 aa7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 CDCP2Q5VXM1 449 aa7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 TTC6Q86TZ1 520 aa7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 ZSCAN1Q8NBB4 408 aa7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 ZNF669Q96BR6 464 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 WDR89Q96FK6 387 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 PCDHGC5Q9Y5F6 944 aa7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 CORINQ9Y5Q5 1042 aa7.77□□□□□ -1.17
HMGB1P46-201ENST00000520062 CCDC85CA6NKD9 419 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 SLC22A31A6NKX4 558 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 SHISA8B8ZZ34 492 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 ADAM11O75078 769 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 PLCG1P19174 1290 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 ERVK-24P63145 666 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 OVOS1Q6IE37 1185 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 RUFY4Q6ZNE9 571 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 DMRTC2Q8IXT2 367 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 WDR18Q9BV38 432 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 ANTXR1Q9H6X2 564 aa7.76□□□□□ -1.17
HMGB1P46-201ENST00000520062 CNNM2Q9H8M5 875 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms