RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 NBPF9Q3BBW0 867 aa16.9■□□□□ 0.3
SDC2-203ENST00000519587 C8orf34Q49A92 452 aa16.9■□□□□ 0.3
SDC2-203ENST00000519587 ZC3H15Q8WU90 426 aaKnown RBP16.9■□□□□ 0.3
SDC2-203ENST00000519587 DSCC1Q9BVC3 393 aa16.9■□□□□ 0.3
SDC2-203ENST00000519587 PCDHAC2Q9Y5I4 1007 aa16.9■□□□□ 0.3
SDC2-203ENST00000519587 COL2A1P02458 1487 aaPredicted RBP16.9■□□□□ 0.3
SDC2-203ENST00000519587 ZMYM6O95789 1325 aa16.9■□□□□ 0.3
SDC2-203ENST00000519587 PATL2C9JE40 543 aaKnown RBP16.89■□□□□ 0.29
SDC2-203ENST00000519587 NPM3O75607 178 aaKnown RBP16.89■□□□□ 0.29
SDC2-203ENST00000519587 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
SDC2-203ENST00000519587 EAPPQ56P03 285 aaPredicted RBP16.89■□□□□ 0.29
SDC2-203ENST00000519587 TGFBRAP1Q8WUH2 860 aa16.89■□□□□ 0.29
SDC2-203ENST00000519587 IDI2Q9BXS1 227 aa16.89■□□□□ 0.29
SDC2-203ENST00000519587 NAPBQ9H115 298 aa16.89■□□□□ 0.29
SDC2-203ENST00000519587 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
SDC2-203ENST00000519587 CTNNA3Q9UI47 895 aa16.89■□□□□ 0.29
SDC2-203ENST00000519587 FLT1P17948 1338 aa16.89■□□□□ 0.29
SDC2-203ENST00000519587 EPB41L2O43491 1005 aaKnown RBP16.88■□□□□ 0.29
SDC2-203ENST00000519587 ENTPD3O75355 529 aa16.88■□□□□ 0.29
SDC2-203ENST00000519587 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
SDC2-203ENST00000519587 PICALMQ13492 652 aa16.88■□□□□ 0.29
SDC2-203ENST00000519587 FAM83AQ86UY5 434 aa16.88■□□□□ 0.29
SDC2-203ENST00000519587 SDR42E1Q8WUS8 393 aa16.88■□□□□ 0.29
SDC2-203ENST00000519587 DCPSQ96C86 337 aaKnown RBP16.88■□□□□ 0.29
SDC2-203ENST00000519587 IL25Q9H293 177 aa16.88■□□□□ 0.29
SDC2-203ENST00000519587 UPF2Q9HAU5 1272 aaKnown RBP16.88■□□□□ 0.29
SDC2-203ENST00000519587 ARPP21Q9UBL0 812 aaPredicted RBP16.88■□□□□ 0.29
SDC2-203ENST00000519587 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
SDC2-203ENST00000519587 GSG1L2A8MUP6 293 aa16.87■□□□□ 0.29
SDC2-203ENST00000519587 ALX1Q15699 326 aa16.87■□□□□ 0.29
SDC2-203ENST00000519587 ANGEL2Q5VTE6 544 aaKnown RBP16.87■□□□□ 0.29
SDC2-203ENST00000519587 MAPKAPK5Q8IW41 473 aa16.87■□□□□ 0.29
SDC2-203ENST00000519587 DCP1AQ9NPI6 582 aaPredicted RBP16.87■□□□□ 0.29
SDC2-203ENST00000519587 PPP2R3BQ9Y5P8 575 aa16.87■□□□□ 0.29
SDC2-203ENST00000519587 POTECB2RU33 542 aa16.86■□□□□ 0.29
SDC2-203ENST00000519587 TCP10L2B9ZVM9 353 aa16.86■□□□□ 0.29
SDC2-203ENST00000519587 PRKAB2O43741 272 aa16.86■□□□□ 0.29
SDC2-203ENST00000519587 HIRAP54198 1017 aaPredicted RBP16.86■□□□□ 0.29
SDC2-203ENST00000519587 CACNB3P54284 484 aa16.86■□□□□ 0.29
SDC2-203ENST00000519587 SULF1Q8IWU6 871 aa16.86■□□□□ 0.29
SDC2-203ENST00000519587 IFNL3Q8IZI9 196 aa16.86■□□□□ 0.29
SDC2-203ENST00000519587 LSG1Q9H089 658 aaKnown RBP16.86■□□□□ 0.29
SDC2-203ENST00000519587 OSBPL5Q9H0X9 879 aaPredicted RBP16.86■□□□□ 0.29
SDC2-203ENST00000519587 DHX36Q9H2U1 1008 aaKnown RBP16.86■□□□□ 0.29
SDC2-203ENST00000519587 MCM9Q9NXL9 1143 aa16.86■□□□□ 0.29
SDC2-203ENST00000519587 HLA-DOAP06340 250 aa16.85■□□□□ 0.29
SDC2-203ENST00000519587 MCCP23508 829 aa16.85■□□□□ 0.29
SDC2-203ENST00000519587 NFIAQ12857 509 aa16.85■□□□□ 0.29
SDC2-203ENST00000519587 VPS53Q5VIR6 699 aa16.85■□□□□ 0.29
SDC2-203ENST00000519587 RNF20Q5VTR2 975 aa16.85■□□□□ 0.29
SDC2-203ENST00000519587 LDHDQ86WU2 507 aa16.85■□□□□ 0.29
SDC2-203ENST00000519587 ZSCAN29Q8IWY8 852 aaPredicted RBP16.85■□□□□ 0.29
SDC2-203ENST00000519587 FAM151AQ8WW52 585 aa16.85■□□□□ 0.29
SDC2-203ENST00000519587 EPB41L4AQ9HCS5 686 aaPredicted RBP16.85■□□□□ 0.29
SDC2-203ENST00000519587 FAM198AQ9UFP1 575 aa16.85■□□□□ 0.29
SDC2-203ENST00000519587 CLEC11AQ9Y240 323 aa16.85■□□□□ 0.29
SDC2-203ENST00000519587 POLR2AP24928 1970 aaKnown RBP16.85■□□□□ 0.29
SDC2-203ENST00000519587 ATRNL1Q5VV63 1379 aa16.85■□□□□ 0.29
SDC2-203ENST00000519587 MYH8P13535 1937 aa16.84■□□□□ 0.29
SDC2-203ENST00000519587 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
SDC2-203ENST00000519587 SLC3A2P08195 630 aaKnown RBP16.84■□□□□ 0.29
SDC2-203ENST00000519587 TCP10Q12799 353 aa16.84■□□□□ 0.29
SDC2-203ENST00000519587 IMMTQ16891 758 aaKnown RBP16.84■□□□□ 0.29
SDC2-203ENST00000519587 TTC6Q86TZ1 520 aa16.84■□□□□ 0.29
SDC2-203ENST00000519587 MAP4K1Q92918 833 aa16.84■□□□□ 0.29
SDC2-203ENST00000519587 HOOK2Q96ED9 719 aa16.84■□□□□ 0.29
SDC2-203ENST00000519587 DDX4Q9NQI0 724 aaKnown RBP16.84■□□□□ 0.29
SDC2-203ENST00000519587 SAP30BPQ9UHR5 308 aaKnown RBP16.84■□□□□ 0.29
SDC2-203ENST00000519587 TAOK2Q9UL54 1235 aa16.84■□□□□ 0.29
SDC2-203ENST00000519587 RBM8AQ9Y5S9 174 aaKnown RBP16.84■□□□□ 0.29
SDC2-203ENST00000519587 CNTNAP1P78357 1384 aa16.84■□□□□ 0.29
SDC2-203ENST00000519587 FOXP2O15409 715 aa16.83■□□□□ 0.28
SDC2-203ENST00000519587 ASTN2O75129 1339 aaPredicted RBP16.83■□□□□ 0.28
SDC2-203ENST00000519587 PTH1RQ03431 593 aa16.83■□□□□ 0.28
SDC2-203ENST00000519587 RASA3Q14644 834 aa16.83■□□□□ 0.28
SDC2-203ENST00000519587 SBK1Q52WX2 424 aa16.83■□□□□ 0.28
SDC2-203ENST00000519587 KRT26Q7Z3Y9 468 aa16.83■□□□□ 0.28
SDC2-203ENST00000519587 TRIM34Q9BYJ4 488 aa16.83■□□□□ 0.28
SDC2-203ENST00000519587 BACH2Q9BYV9 841 aa16.83■□□□□ 0.28
SDC2-203ENST00000519587 MKRN1Q9UHC7 482 aaKnown RBP16.83■□□□□ 0.28
SDC2-203ENST00000519587 PGAP2Q9UHJ9 254 aa16.83■□□□□ 0.28
SDC2-203ENST00000519587 USP17L12C9JPN9 530 aa16.82■□□□□ 0.28
SDC2-203ENST00000519587 USP17L21D6R901 530 aa16.82■□□□□ 0.28
SDC2-203ENST00000519587 FGAP02671 866 aa16.82■□□□□ 0.28
SDC2-203ENST00000519587 DEFB129Q9H1M3 183 aa16.82■□□□□ 0.28
SDC2-203ENST00000519587 ROBO3Q96MS0 1386 aa16.81■□□□□ 0.28
SDC2-203ENST00000519587 FOXN1O15353 648 aa16.81■□□□□ 0.28
SDC2-203ENST00000519587 CTR9Q6PD62 1173 aa16.81■□□□□ 0.28
SDC2-203ENST00000519587 CSRNP1Q96S65 589 aa16.81■□□□□ 0.28
SDC2-203ENST00000519587 ZNF287Q9HBT7 754 aa16.81■□□□□ 0.28
SDC2-203ENST00000519587 PCDH10Q9P2E7 1040 aa16.81■□□□□ 0.28
SDC2-203ENST00000519587 PI4KBQ9UBF8 816 aa16.81■□□□□ 0.28
SDC2-203ENST00000519587 PALD1Q9ULE6 856 aa16.81■□□□□ 0.28
SDC2-203ENST00000519587 SIPA1L1O43166 1804 aa16.8■□□□□ 0.28
SDC2-203ENST00000519587 MINDY4BA8MYZ0 360 aa16.8■□□□□ 0.28
SDC2-203ENST00000519587 ZNF213O14771 459 aa16.8■□□□□ 0.28
SDC2-203ENST00000519587 ZKSCAN1P17029 563 aaPredicted RBP16.8■□□□□ 0.28
SDC2-203ENST00000519587 PPARAQ07869 468 aa16.8■□□□□ 0.28
SDC2-203ENST00000519587 SUPT20HL1Q3ZLR7 823 aa16.8■□□□□ 0.28
SDC2-203ENST00000519587 C12orf60Q5U649 245 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms