RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 ARMT1Q9H993 441 aa13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 ADARB2Q9NS39 739 aaKnown RBP13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 ATP8A2Q9NTI2 1148 aa13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 MKRN1Q9UHC7 482 aaKnown RBP13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 CIZ1Q9ULV3 898 aaPredicted RBP13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
ARFGEF1-202ENST00000517955 FOCADQ5VW36 1801 aa13.69□□□□□ -0.22
ARFGEF1-202ENST00000517955 ECM29Q5VYK3 1845 aa13.69□□□□□ -0.22
ARFGEF1-202ENST00000517955 IQCA1LA6NCM1 817 aa13.69□□□□□ -0.22
ARFGEF1-202ENST00000517955 GSG1L2A8MUP6 293 aa13.69□□□□□ -0.22
ARFGEF1-202ENST00000517955 FOXP2O15409 715 aa13.69□□□□□ -0.22
ARFGEF1-202ENST00000517955 LMOD1P29536 600 aaPredicted RBP13.69□□□□□ -0.22
ARFGEF1-202ENST00000517955 CCDC129Q6ZRS4 1044 aa13.69□□□□□ -0.22
ARFGEF1-202ENST00000517955 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
ARFGEF1-202ENST00000517955 USP40Q9NVE5 1235 aa13.69□□□□□ -0.22
ARFGEF1-202ENST00000517955 ADAMTSL1Q8N6G6 1762 aa13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 CDK5RAP2Q96SN8 1893 aa13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 SHTN1A0MZ66 631 aa13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 POTECB2RU33 542 aa13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 MYO1BO43795 1136 aa13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 WDHD1O75717 1129 aaPredicted RBP13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 EPS15P42566 896 aa13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 RBM5P52756 815 aaKnown RBP eCLIP13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 USP50Q70EL3 339 aaPredicted RBP13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 SH3RF3Q8TEJ3 882 aaPredicted RBP13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 BMP2KQ9NSY1 1161 aaPredicted RBP13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 HACL1Q9UJ83 578 aa13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 SLC4A4Q9Y6R1 1079 aa13.68□□□□□ -0.22
ARFGEF1-202ENST00000517955 SEC24BO95487 1268 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 PTH1RQ03431 593 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 KIF4BQ2VIQ3 1234 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 SBK1Q52WX2 424 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 SAMD7Q7Z3H4 446 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 FAM83AQ86UY5 434 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 TEX11Q8IYF3 940 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 IFNL3Q8IZI9 196 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 NACAP1Q9BZK3 213 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 DCP1AQ9NPI6 582 aaPredicted RBP13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 ZNF70Q9UC06 446 aaPredicted RBP13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 PGAP2Q9UHJ9 254 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 TAOK2Q9UL54 1235 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 PCDHAC2Q9Y5I4 1007 aa13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 COL2A1P02458 1487 aaPredicted RBP13.67□□□□□ -0.22
ARFGEF1-202ENST00000517955 PITPNM2Q9BZ72 1349 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 PRKAB2O43741 272 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 ENTPD3O75355 529 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 EGFRP00533 1210 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 FGAP02671 866 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 HIRAP54198 1017 aaPredicted RBP13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 NECTIN1Q15223 517 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 NBPF9Q3BBW0 867 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 KCNB2Q92953 911 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 IL17RAQ96F46 866 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 TDRD3Q9H7E2 651 aaKnown RBP13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 ANO2Q9NQ90 1003 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 CTNNA3Q9UI47 895 aa13.66□□□□□ -0.22
ARFGEF1-202ENST00000517955 EPHX2P34913 555 aa13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 TSGA10IPQ3SY00 556 aa13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 TBC1D10BQ4KMP7 808 aaPredicted RBP13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 TRPM4Q8TD43 1214 aa13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 TGFBRAP1Q8WUH2 860 aa13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 SDR42E1Q8WUS8 393 aa13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 DDRGK1Q96HY6 314 aa13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 TAF1DQ9H5J8 278 aaPredicted RBP13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 EPB41L4AQ9HCS5 686 aaPredicted RBP13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 TMOD2Q9NZR1 351 aa13.65□□□□□ -0.22
ARFGEF1-202ENST00000517955 FLT1P17948 1338 aa13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 DDX60LQ5H9U9 1706 aaKnown RBP13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 ATRNL1Q5VV63 1379 aa13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 VEGFAP15692 232 aaPredicted RBP13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 HSPA4P34932 840 aa13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 USP5P45974 858 aa13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 ATN1P54259 1190 aaPredicted RBP13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 TNFAIP1Q13829 316 aa13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 FAM151AQ8WW52 585 aa13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 OSBPL5Q9H0X9 879 aaPredicted RBP13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 DHX36Q9H2U1 1008 aaKnown RBP13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 DDX4Q9NQI0 724 aaKnown RBP13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 ARPP21Q9UBL0 812 aaPredicted RBP13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 FAM198AQ9UFP1 575 aa13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 ANAPC4Q9UJX5 808 aa13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 RBM8AQ9Y5S9 174 aaKnown RBP13.64□□□□□ -0.23
ARFGEF1-202ENST00000517955 APPP05067 770 aa13.63□□□□□ -0.23
ARFGEF1-202ENST00000517955 NT5C2P49902 561 aa13.63□□□□□ -0.23
ARFGEF1-202ENST00000517955 NFIAQ12857 509 aa13.63□□□□□ -0.23
ARFGEF1-202ENST00000517955 RBM26Q5T8P6 1007 aaKnown RBP13.63□□□□□ -0.23
ARFGEF1-202ENST00000517955 CTR9Q6PD62 1173 aa13.63□□□□□ -0.23
ARFGEF1-202ENST00000517955 APOBEC3FQ8IUX4 373 aaKnown RBP13.63□□□□□ -0.23
ARFGEF1-202ENST00000517955 NAPBQ9H115 298 aa13.63□□□□□ -0.23
ARFGEF1-202ENST00000517955 UPF2Q9HAU5 1272 aaKnown RBP13.63□□□□□ -0.23
ARFGEF1-202ENST00000517955 PPP2R3BQ9Y5P8 575 aa13.63□□□□□ -0.23
ARFGEF1-202ENST00000517955 MYH1P12882 1939 aa13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 BAZ2AQ9UIF9 1905 aaKnown RBP13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 CNTNAP1P78357 1384 aa13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 NAV1Q8NEY1 1877 aa13.62□□□□□ -0.23
ARFGEF1-202ENST00000517955 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms