RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 SNCAIPQ9Y6H5 919 aa30.08■■■□□ 2.41
PVT1-204ENST00000517525 MIGA2Q7L4E1 593 aa30.07■■■□□ 2.4
PVT1-204ENST00000517525 ERO1BQ86YB8 467 aa30.07■■■□□ 2.4
PVT1-204ENST00000517525 IFNL1Q8IU54 200 aa30.07■■■□□ 2.4
PVT1-204ENST00000517525 MS4A4AQ96JQ5 239 aa30.07■■■□□ 2.4
PVT1-204ENST00000517525 COL2A1P02458 1487 aaPredicted RBP30.06■■■□□ 2.4
PVT1-204ENST00000517525 BAG3O95817 575 aa30.06■■■□□ 2.4
PVT1-204ENST00000517525 PLCG2P16885 1265 aa30.06■■■□□ 2.4
PVT1-204ENST00000517525 NOL9Q5SY16 702 aaKnown RBP30.06■■■□□ 2.4
PVT1-204ENST00000517525 IFIT2P09913 472 aaKnown RBP30.05■■■□□ 2.4
PVT1-204ENST00000517525 YTHDC1Q96MU7 727 aaKnown RBP30.05■■■□□ 2.4
PVT1-204ENST00000517525 ZKSCAN4Q969J2 545 aaPredicted RBP30.04■■■□□ 2.4
PVT1-204ENST00000517525 NOL10Q9BSC4 688 aaKnown RBP30.04■■■□□ 2.4
PVT1-204ENST00000517525 DCTPP1Q9H773 170 aa30.04■■■□□ 2.4
PVT1-204ENST00000517525 DDTLA6NHG4 134 aaPredicted RBP30.03■■■□□ 2.4
PVT1-204ENST00000517525 IGF2BP3O00425 579 aaKnown RBP eCLIP30.03■■■□□ 2.4
PVT1-204ENST00000517525 TBC1D12O60347 775 aa30.03■■■□□ 2.4
PVT1-204ENST00000517525 GTF2A2P52657 109 aa30.03■■■□□ 2.4
PVT1-204ENST00000517525 OTUD7BQ6GQQ9 843 aa30.03■■■□□ 2.4
PVT1-204ENST00000517525 CERS3Q8IU89 383 aa30.03■■■□□ 2.4
PVT1-204ENST00000517525 LRRCC1Q9C099 1032 aa30.03■■■□□ 2.4
PVT1-204ENST00000517525 MAST2Q6P0Q8 1798 aa30.03■■■□□ 2.4
PVT1-204ENST00000517525 PHF20L1A8MW92 1017 aa30.02■■■□□ 2.4
PVT1-204ENST00000517525 APBB1O00213 710 aa30.02■■■□□ 2.4
PVT1-204ENST00000517525 INPP5BP32019 993 aa30.02■■■□□ 2.4
PVT1-204ENST00000517525 PPATQ06203 517 aa30.02■■■□□ 2.4
PVT1-204ENST00000517525 PPIL2Q13356 520 aa30.02■■■□□ 2.4
PVT1-204ENST00000517525 TTF1Q15361 905 aaPredicted RBP30.02■■■□□ 2.4
PVT1-204ENST00000517525 ADGRA1Q86SQ6 560 aa30.02■■■□□ 2.4
PVT1-204ENST00000517525 CNKSR2Q8WXI2 1034 aa30.02■■■□□ 2.4
PVT1-204ENST00000517525 CASP8AP2Q9UKL3 1982 aa30.01■■■□□ 2.4
PVT1-204ENST00000517525 TBC1D8O95759 1140 aa30.01■■■□□ 2.39
PVT1-204ENST00000517525 PICALMQ13492 652 aa30.01■■■□□ 2.39
PVT1-204ENST00000517525 TEX11Q8IYF3 940 aa30.01■■■□□ 2.39
PVT1-204ENST00000517525 PTPN18Q99952 460 aa30.01■■■□□ 2.39
PVT1-204ENST00000517525 OSBPL5Q9H0X9 879 aaPredicted RBP30.01■■■□□ 2.39
PVT1-204ENST00000517525 MAP3K12Q12852 859 aa30■■■□□ 2.39
PVT1-204ENST00000517525 ZSCAN29Q8IWY8 852 aaPredicted RBP30■■■□□ 2.39
PVT1-204ENST00000517525 SH3RF3Q8TEJ3 882 aaPredicted RBP30■■■□□ 2.39
PVT1-204ENST00000517525 OTUD5Q96G74 571 aa30■■■□□ 2.39
PVT1-204ENST00000517525 ANTXR1Q9H6X2 564 aa30■■■□□ 2.39
PVT1-204ENST00000517525 ZBTB4Q9P1Z0 1013 aaPredicted RBP30■■■□□ 2.39
PVT1-204ENST00000517525 GPR25O00155 361 aa29.99■■■□□ 2.39
PVT1-204ENST00000517525 IDH1O75874 414 aaKnown RBP29.99■■■□□ 2.39
PVT1-204ENST00000517525 ATP5JP18859 108 aa29.99■■■□□ 2.39
PVT1-204ENST00000517525 BRI3BPQ8WY22 251 aa29.99■■■□□ 2.39
PVT1-204ENST00000517525 AATFQ9NY61 560 aaKnown RBP eCLIP29.99■■■□□ 2.39
PVT1-204ENST00000517525 CYP7A1P22680 504 aa29.98■■■□□ 2.39
PVT1-204ENST00000517525 ZCCHC17Q9NP64 241 aaKnown RBP29.98■■■□□ 2.39
PVT1-204ENST00000517525 PCDHB15Q9Y5E8 787 aa29.98■■■□□ 2.39
PVT1-204ENST00000517525 IRF6O14896 467 aa29.97■■■□□ 2.39
PVT1-204ENST00000517525 CETPP11597 493 aa29.97■■■□□ 2.39
PVT1-204ENST00000517525 SNAPC2Q13487 334 aa29.97■■■□□ 2.39
PVT1-204ENST00000517525 DHX36Q9H2U1 1008 aaKnown RBP29.97■■■□□ 2.39
PVT1-204ENST00000517525 KCNH4Q9UQ05 1017 aa29.97■■■□□ 2.39
PVT1-204ENST00000517525 NDUFB9Q9Y6M9 179 aa29.97■■■□□ 2.39
PVT1-204ENST00000517525 CCL15-CCL14A0A0B4J2E2 113 aa29.96■■■□□ 2.39
PVT1-204ENST00000517525 CTNND1O60716 968 aaKnown RBP29.96■■■□□ 2.39
PVT1-204ENST00000517525 CCL15Q16663 113 aa29.96■■■□□ 2.39
PVT1-204ENST00000517525 ZNF296Q8WUU4 475 aaPredicted RBP29.96■■■□□ 2.39
PVT1-204ENST00000517525 R3HDMLQ9H3Y0 253 aa29.96■■■□□ 2.39
PVT1-204ENST00000517525 AK9Q5TCS8 1911 aa29.95■■■□□ 2.39
PVT1-204ENST00000517525 DOCK2Q92608 1830 aa29.95■■■□□ 2.39
PVT1-204ENST00000517525 SCYL3Q8IZE3 742 aa29.95■■■□□ 2.39
PVT1-204ENST00000517525 MAGEB6Q8N7X4 407 aa29.95■■■□□ 2.39
PVT1-204ENST00000517525 AAMPQ13685 434 aa29.94■■■□□ 2.38
PVT1-204ENST00000517525 METTL16Q86W50 562 aaKnown RBP29.94■■■□□ 2.38
PVT1-204ENST00000517525 ABHD8Q96I13 439 aa29.94■■■□□ 2.38
PVT1-204ENST00000517525 MCOLN1Q9GZU1 580 aa29.94■■■□□ 2.38
PVT1-204ENST00000517525 HAUS7Q99871 368 aa29.93■■■□□ 2.38
PVT1-204ENST00000517525 PI4KBQ9UBF8 816 aa29.93■■■□□ 2.38
PVT1-204ENST00000517525 HERC5Q9UII4 1024 aaKnown RBP29.93■■■□□ 2.38
PVT1-204ENST00000517525 MYO5AQ9Y4I1 1855 aaKnown RBP29.93■■■□□ 2.38
PVT1-204ENST00000517525 CXCL11O14625 94 aa29.92■■■□□ 2.38
PVT1-204ENST00000517525 FKTNO75072 461 aa29.92■■■□□ 2.38
PVT1-204ENST00000517525 DGKZQ13574 1117 aa29.92■■■□□ 2.38
PVT1-204ENST00000517525 CTU1Q7Z7A3 348 aaKnown RBP29.92■■■□□ 2.38
PVT1-204ENST00000517525 TGFBRAP1Q8WUH2 860 aa29.92■■■□□ 2.38
PVT1-204ENST00000517525 FLT1P17948 1338 aa29.92■■■□□ 2.38
PVT1-204ENST00000517525 DYNLL1P63167 89 aaKnown RBP29.91■■■□□ 2.38
PVT1-204ENST00000517525 CRBNQ96SW2 442 aa29.91■■■□□ 2.38
PVT1-204ENST00000517525 GOLIM4O00461 696 aa29.9■■■□□ 2.38
PVT1-204ENST00000517525 PDE6AP16499 860 aa29.9■■■□□ 2.38
PVT1-204ENST00000517525 PTPRAP18433 802 aa29.9■■■□□ 2.38
PVT1-204ENST00000517525 CRHR2Q13324 411 aa29.9■■■□□ 2.38
PVT1-204ENST00000517525 FOXP4Q8IVH2 680 aaPredicted RBP29.9■■■□□ 2.38
PVT1-204ENST00000517525 RIOK1Q9BRS2 568 aaKnown RBP29.9■■■□□ 2.38
PVT1-204ENST00000517525 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.9■■■□□ 2.383e-9■■■■□ 26.1
PVT1-204ENST00000517525 PICK1Q9NRD5 415 aa29.9■■■□□ 2.38
PVT1-204ENST00000517525 PAG1Q9NWQ8 432 aa29.9■■■□□ 2.38
PVT1-204ENST00000517525 SMARCA5O60264 1052 aaPredicted RBP29.89■■■□□ 2.38
PVT1-204ENST00000517525 PKN2Q16513 984 aaKnown RBP29.89■■■□□ 2.38
PVT1-204ENST00000517525 SLC9C2Q5TAH2 1124 aa29.89■■■□□ 2.38
PVT1-204ENST00000517525 MAPKAPK5Q8IW41 473 aa29.89■■■□□ 2.38
PVT1-204ENST00000517525 FAM43AQ8N2R8 423 aa29.89■■■□□ 2.38
PVT1-204ENST00000517525 DNAJC2Q99543 621 aaKnown RBP29.89■■■□□ 2.38
PVT1-204ENST00000517525 BOLA2Q9H3K6 86 aa29.89■■■□□ 2.38
PVT1-204ENST00000517525 TCRBV5S4A2TA0A5A2 114 aa29.88■■■□□ 2.37
PVT1-204ENST00000517525 MIGA1Q8NAN2 632 aa29.88■■■□□ 2.37
PVT1-204ENST00000517525 ECHDC1Q9NTX5 307 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms