RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 DNMT3LQ9UJW3 386 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 CYP8B1Q9UNU6 501 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 KCNH4Q9UQ05 1017 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 POLR3KQ9Y2Y1 108 aaPredicted RBP3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 SAMM50Q9Y512 469 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 PCDHB14Q9Y5E9 798 aa3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 SOS2Q07890 1332 aaPredicted RBP3.39□□□□□ -1.87
SCARNA3-201ENST00000517097 CCDC163A0A0D9SF12 145 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 SHTN1A0MZ66 631 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 FAM181BA6NEQ2 426 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 GSG1L2A8MUP6 293 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 ADCY3O60266 1144 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 PPFIA3O75145 1194 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 ATE1O95260 518 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 RASGRP1O95267 797 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 SCGB1D2O95969 90 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 KRT18P05783 430 aaKnown RBP3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 PSAPP07602 524 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 NME2P22392 152 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 GUCY2CP25092 1073 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 GUCY2FP51841 1108 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 KCNQ4P56696 695 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 SFSWAPQ12872 951 aaKnown RBP3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 HYAL2Q12891 473 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 RALBP1Q15311 655 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 C4orf46Q504U0 113 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 ZC3H12BQ5HYM0 836 aaKnown RBP3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 AXDND1Q5T1B0 1012 aaPredicted RBP3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 SAMD5Q5TGI4 173 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 HGSNATQ68CP4 663 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 DIEXFQ68CQ4 756 aaKnown RBP3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 WWC2Q6AWC2 1192 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 EEPD1Q7L9B9 569 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 LYSMD3Q7Z3D4 306 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 CEP120Q8N960 986 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 TMEM102Q8N9M5 508 aaPredicted RBP3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 ATL2Q8NHH9 583 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 ASAP3Q8TDY4 903 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 NXPE3Q969Y0 559 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 SLC39A13Q96H72 371 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 UBA5Q9GZZ9 404 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 ANTXR1Q9H6X2 564 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 TIMMDC1Q9NPL8 285 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 MAPRE3Q9UPY8 281 aa3.38□□□□□ -1.87
SCARNA3-201ENST00000517097 PLD2O14939 933 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 GRIN3BO60391 1043 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 PPFIA4O75335 1185 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 KATNA1O75449 491 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 UPP2O95045 317 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 RAPGEF3O95398 923 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 RHOQP17081 205 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 PAX3P23760 479 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 L1CAMP32004 1257 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 SOX18P35713 384 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 RPL6Q02878 288 aaKnown RBP3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 PLAURQ03405 335 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 PPP2R3AQ06190 1150 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 OS9Q13438 667 aaPredicted RBP3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 LRRC14Q15048 493 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 LRRFIP1Q32MZ4 808 aaKnown RBP3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 SYCP2LQ5T4T6 812 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 FOXB2Q5VYV0 432 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 VHLLQ6RSH7 139 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 C14orf80Q86SX3 495 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 LRRC47Q8N1G4 583 aaKnown RBP3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 AFAP1L2Q8N4X5 818 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 RNF217Q8TC41 542 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 STK35Q8TDR2 534 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 KISS1RQ969F8 398 aaPredicted RBP3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 GAL3ST3Q96A11 431 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 PNMA5Q96PV4 448 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 MPHOSPH6Q99547 160 aaKnown RBP3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 KIF2CQ99661 725 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 TM9SF2Q99805 663 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 ASPSCR1Q9BZE9 553 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 MUC3BQ9H195 1237 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 CRISPLD1Q9H336 500 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 RUBCNLQ9H714 662 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 ARNT2Q9HBZ2 717 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 NCOA5Q9HCD5 579 aaKnown RBP3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 TLR7Q9NYK1 1049 aaKnown RBP3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 COMMD10Q9Y6G5 202 aa3.37□□□□□ -1.87
SCARNA3-201ENST00000517097 DNAJC25-GNG10A0A024R161 153 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 IQCA1LA6NCM1 817 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 MEIS3P2A8K0S8 358 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 PDE2AO00408 941 aaPredicted RBP3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 SUSD5O60279 629 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 EYA4O95677 639 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 LDHAP00338 332 aaKnown RBP3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 MYL1P05976 194 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 HOXD8P13378 290 aaPredicted RBP3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 ATF3P18847 181 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 NFKB1P19838 968 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 RAB27AP51159 221 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 KRT76Q01546 638 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 PTPN11Q06124 597 aaPredicted RBP3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 HDAC1Q13547 482 aaPredicted RBP3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 NCAPHQ15003 741 aa3.36□□□□□ -1.87
SCARNA3-201ENST00000517097 SLC10A6Q3KNW5 377 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms