RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 CDK5R2Q13319 367 aa5.37□□□□□ -1.55
RNU6-1088P-201ENST00000516850 LRRC14Q15048 493 aa5.37□□□□□ -1.55
RNU6-1088P-201ENST00000516850 PDZD3Q86UT5 571 aa5.37□□□□□ -1.55
RNU6-1088P-201ENST00000516850 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.37□□□□□ -1.55
RNU6-1088P-201ENST00000516850 MISP3Q96FF7 219 aa5.37□□□□□ -1.55
RNU6-1088P-201ENST00000516850 NECAB3Q96P71 396 aaPredicted RBP5.37□□□□□ -1.55
RNU6-1088P-201ENST00000516850 ADGRE2Q9UHX3 823 aa5.37□□□□□ -1.55
RNU6-1088P-201ENST00000516850 PPM1HQ9ULR3 514 aa5.37□□□□□ -1.55
RNU6-1088P-201ENST00000516850 ERVK-24P63145 666 aa5.36□□□□□ -1.55
RNU6-1088P-201ENST00000516850 RNF214Q8ND24 703 aa5.36□□□□□ -1.55
RNU6-1088P-201ENST00000516850 NETO1Q8TDF5 533 aa5.36□□□□□ -1.55
RNU6-1088P-201ENST00000516850 GPBAR1Q8TDU6 330 aa5.36□□□□□ -1.55
RNU6-1088P-201ENST00000516850 TRIM37O94972 964 aa5.35□□□□□ -1.55
RNU6-1088P-201ENST00000516850 FGD1P98174 961 aa5.35□□□□□ -1.55
RNU6-1088P-201ENST00000516850 FMR1Q06787 632 aaKnown RBP eCLIP5.35□□□□□ -1.55
RNU6-1088P-201ENST00000516850 ZC3H12AQ5D1E8 599 aaKnown RBP5.35□□□□□ -1.55
RNU6-1088P-201ENST00000516850 CDC37L1Q7L3B6 337 aa5.35□□□□□ -1.55
RNU6-1088P-201ENST00000516850 STK35Q8TDR2 534 aa5.35□□□□□ -1.55
RNU6-1088P-201ENST00000516850 FRMD6Q96NE9 622 aa5.35□□□□□ -1.55
RNU6-1088P-201ENST00000516850 KRTAP9-2Q9BYQ4 174 aa5.35□□□□□ -1.55
RNU6-1088P-201ENST00000516850 PCDHGC5Q9Y5F6 944 aa5.35□□□□□ -1.55
RNU6-1088P-201ENST00000516850 BMP6P22004 513 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 ZNF252P-AS1Q0IIN9 211 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 LLGL2Q6P1M3 1020 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 C3orf58Q8NDZ4 430 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 ISL2Q96A47 359 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 ELMO3Q96BJ8 720 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 ASIC4Q96FT7 647 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 FMNL2Q96PY5 1086 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 OSBPL7Q9BZF2 842 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 C12orf49Q9H741 205 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 GOLGA2P5Q9HBQ8 144 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 FAM8A1Q9UBU6 413 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 WWC3Q9ULE0 1092 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 PCDHA4Q9UN74 947 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 CYP8B1Q9UNU6 501 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 CSADQ9Y600 493 aa5.34□□□□□ -1.55
RNU6-1088P-201ENST00000516850 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 DCDC2CA8MYV0 355 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 ENC1O14682 589 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 FBXO24O75426 580 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 LDHBP07195 334 aaKnown RBP5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 LMNB1P20700 586 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 PLCL1Q15111 1095 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 IFI16Q16666 785 aaKnown RBP5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 PPM1JQ5JR12 505 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 SCARA3Q6AZY7 606 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 TOP6BLQ8N6T0 577 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 KCT2Q8NC54 265 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 GRIN3AQ8TCU5 1115 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 BCL7CQ8WUZ0 217 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 DUSP23Q9BVJ7 150 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 TRAIPQ9BWF2 469 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 MKNK2Q9HBH9 465 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 PAK6Q9NQU5 681 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 GTF2IRD1Q9UHL9 959 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 VAV3Q9UKW4 847 aa5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 TTF2Q9UNY4 1162 aaKnown RBP5.33□□□□□ -1.56
RNU6-1088P-201ENST00000516850 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 BIN1O00499 593 aa5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 FANCGO15287 622 aa5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 NEFMP07197 916 aa5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 USP17L7P0C7H9 530 aa5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 JUNBP17275 347 aaPredicted RBP5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 C12orf40Q86WS4 652 aa5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 PLD6Q8N2A8 252 aaKnown RBP5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 FAM181AQ8N9Y4 354 aa5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 ANKRD24Q8TF21 1146 aa5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 HRASLS5Q96KN8 279 aa5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 SETDB2Q96T68 719 aa5.32□□□□□ -1.56
RNU6-1088P-201ENST00000516850 TMEM265A0A087WTH1 108 aa5.31□□□□□ -1.56
RNU6-1088P-201ENST00000516850 PAGE1O75459 146 aa5.31□□□□□ -1.56
RNU6-1088P-201ENST00000516850 LEFTY1O75610 366 aa5.31□□□□□ -1.56
RNU6-1088P-201ENST00000516850 EIF4BP23588 611 aaKnown RBP5.31□□□□□ -1.56
RNU6-1088P-201ENST00000516850 PRKCQQ04759 706 aa5.31□□□□□ -1.56
RNU6-1088P-201ENST00000516850 BNIP3Q12983 259 aa5.31□□□□□ -1.56
RNU6-1088P-201ENST00000516850 PCNX4Q63HM2 1172 aa5.31□□□□□ -1.56
RNU6-1088P-201ENST00000516850 MPRIPQ6WCQ1 1025 aa5.31□□□□□ -1.56
RNU6-1088P-201ENST00000516850 CBLL1Q75N03 491 aa5.31□□□□□ -1.56
RNU6-1088P-201ENST00000516850 ZNF507Q8TCN5 953 aa5.31□□□□□ -1.56
RNU6-1088P-201ENST00000516850 CEACAM5P06731 702 aa5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 P4HBP07237 508 aaKnown RBP5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 YBX3P16989 372 aaKnown RBP eCLIP5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 AOC3Q16853 763 aa5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 ZNF574Q6ZN55 896 aaPredicted RBP5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 NFXL1Q6ZNB6 911 aa5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 SV2BQ7L1I2 683 aa5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 HDXQ7Z353 690 aa5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 PI4K2BQ8TCG2 481 aa5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 PRDM10Q9NQV6 1147 aa5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 CACNA2D2Q9NY47 1150 aa5.3□□□□□ -1.56
RNU6-1088P-201ENST00000516850 GNAT3A8MTJ3 354 aa5.29□□□□□ -1.56
RNU6-1088P-201ENST00000516850 CELA3AP09093 270 aa5.29□□□□□ -1.56
RNU6-1088P-201ENST00000516850 CD8BP10966 210 aa5.29□□□□□ -1.56
RNU6-1088P-201ENST00000516850 ITIH2P19823 946 aa5.29□□□□□ -1.56
RNU6-1088P-201ENST00000516850 GNA15P30679 374 aa5.29□□□□□ -1.56
RNU6-1088P-201ENST00000516850 OXCT1P55809 520 aa5.29□□□□□ -1.56
RNU6-1088P-201ENST00000516850 DIEXFQ68CQ4 756 aaKnown RBP5.29□□□□□ -1.56
RNU6-1088P-201ENST00000516850 SPRED2Q7Z698 418 aa5.29□□□□□ -1.56
RNU6-1088P-201ENST00000516850 SNX11Q9Y5W9 270 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms