RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 DDX4Q9NQI0 724 aaKnown RBP29.75■■■□□ 2.35
CCND3-221ENST00000514588 HMG20BQ9P0W2 317 aa29.75■■■□□ 2.35
CCND3-221ENST00000514588 CPA4Q9UI42 421 aa29.75■■■□□ 2.35
CCND3-221ENST00000514588 DOCK2Q92608 1830 aa29.74■■■□□ 2.35
CCND3-221ENST00000514588 ERICH6Q7L0X2 663 aa29.74■■■□□ 2.35
CCND3-221ENST00000514588 NBPF11Q86T75 865 aa29.74■■■□□ 2.35
CCND3-221ENST00000514588 ZSCAN29Q8IWY8 852 aaPredicted RBP29.74■■■□□ 2.35
CCND3-221ENST00000514588 ADGRA2Q96PE1 1338 aa29.73■■■□□ 2.35
CCND3-221ENST00000514588 DDTLA6NHG4 134 aaPredicted RBP29.73■■■□□ 2.35
CCND3-221ENST00000514588 MAP3K10Q02779 954 aa29.73■■■□□ 2.35
CCND3-221ENST00000514588 SCYL3Q8IZE3 742 aa29.73■■■□□ 2.35
CCND3-221ENST00000514588 TMEM106CQ9BVX2 250 aa29.73■■■□□ 2.35
CCND3-221ENST00000514588 GPR75-ASB3A0A0A6YYF3 556 aa29.72■■■□□ 2.35
CCND3-221ENST00000514588 CXCL11O14625 94 aa29.72■■■□□ 2.35
CCND3-221ENST00000514588 GNRH1P01148 92 aa29.72■■■□□ 2.35
CCND3-221ENST00000514588 RHBDL3P58872 404 aa29.72■■■□□ 2.35
CCND3-221ENST00000514588 PICALMQ13492 652 aa29.72■■■□□ 2.35
CCND3-221ENST00000514588 GORABQ5T7V8 394 aa29.72■■■□□ 2.35
CCND3-221ENST00000514588 PI16Q6UXB8 463 aa29.72■■■□□ 2.35
CCND3-221ENST00000514588 SPATA5Q8NB90 893 aa29.72■■■□□ 2.35
CCND3-221ENST00000514588 SLURP2P0DP57 97 aa29.71■■■□□ 2.35
CCND3-221ENST00000514588 CTGFP29279 349 aa29.71■■■□□ 2.35
CCND3-221ENST00000514588 G3BP1Q13283 466 aaKnown RBP eCLIP29.71■■■□□ 2.35
CCND3-221ENST00000514588 GPAT2Q6NUI2 795 aa29.71■■■□□ 2.35
CCND3-221ENST00000514588 PICK1Q9NRD5 415 aa29.71■■■□□ 2.35
CCND3-221ENST00000514588 ECM2O94769 699 aaPredicted RBP29.7■■■□□ 2.35
CCND3-221ENST00000514588 PTPRAP18433 802 aa29.7■■■□□ 2.35
CCND3-221ENST00000514588 TBC1D9Q6ZT07 1266 aa29.7■■■□□ 2.35
CCND3-221ENST00000514588 TMEM57Q8N5G2 664 aa29.7■■■□□ 2.35
CCND3-221ENST00000514588 SH3TC2Q8TF17 1288 aa29.7■■■□□ 2.35
CCND3-221ENST00000514588 ZHX2Q9Y6X8 837 aa29.7■■■□□ 2.35
CCND3-221ENST00000514588 ARID4AP29374 1257 aaPredicted RBP29.69■■■□□ 2.34
CCND3-221ENST00000514588 PRMT2P55345 433 aa29.69■■■□□ 2.34
CCND3-221ENST00000514588 TRIM47Q96LD4 638 aa29.69■■■□□ 2.34
CCND3-221ENST00000514588 PSMC4P43686 418 aa29.68■■■□□ 2.34
CCND3-221ENST00000514588 ZKSCAN2Q63HK3 967 aa29.68■■■□□ 2.34
CCND3-221ENST00000514588 NSUN4Q96CB9 384 aaKnown RBP29.68■■■□□ 2.34
CCND3-221ENST00000514588 A0A0G2JLL6 359 aaPredicted RBP29.67■■■□□ 2.34
CCND3-221ENST00000514588 PRRT2Q7Z6L0 340 aaPredicted RBP29.67■■■□□ 2.34
CCND3-221ENST00000514588 PARK7Q99497 189 aaKnown RBP29.67■■■□□ 2.34
CCND3-221ENST00000514588 AFG3L2Q9Y4W6 797 aa29.67■■■□□ 2.34
CCND3-221ENST00000514588 MKI67P46013 3256 aaKnown RBP29.67■■■□□ 2.34
CCND3-221ENST00000514588 BRCA2P51587 3418 aa29.67■■■□□ 2.34
CCND3-221ENST00000514588 CTNND1O60716 968 aaKnown RBP29.66■■■□□ 2.34
CCND3-221ENST00000514588 NPM3O75607 178 aaKnown RBP29.66■■■□□ 2.34
CCND3-221ENST00000514588 MYCP01106 439 aaPredicted RBP29.66■■■□□ 2.34
CCND3-221ENST00000514588 LDHCP07864 332 aa29.66■■■□□ 2.34
CCND3-221ENST00000514588 CYP2C8P10632 490 aa29.66■■■□□ 2.34
CCND3-221ENST00000514588 MCAMP43121 646 aa29.66■■■□□ 2.34
CCND3-221ENST00000514588 GSTO1P78417 241 aa29.66■■■□□ 2.34
CCND3-221ENST00000514588 SLC4A8Q2Y0W8 1093 aa29.66■■■□□ 2.34
CCND3-221ENST00000514588 SRRDQ9UH36 339 aa29.66■■■□□ 2.34
CCND3-221ENST00000514588 POLA2Q14181 598 aa29.65■■■□□ 2.34
CCND3-221ENST00000514588 FASTKD5Q7L8L6 764 aaKnown RBP29.65■■■□□ 2.34
CCND3-221ENST00000514588 RAI14Q9P0K7 980 aa29.65■■■□□ 2.34
CCND3-221ENST00000514588 UQCRFS1P1P0C7P4 283 aa29.64■■■□□ 2.34
CCND3-221ENST00000514588 BCRP11274 1271 aa29.64■■■□□ 2.34
CCND3-221ENST00000514588 OSBPP22059 807 aa29.64■■■□□ 2.34
CCND3-221ENST00000514588 TBC1D12O60347 775 aa29.63■■■□□ 2.33
CCND3-221ENST00000514588 FMNL1O95466 1100 aaPredicted RBP29.63■■■□□ 2.33
CCND3-221ENST00000514588 MAP4K4O95819 1239 aaPredicted RBP29.63■■■□□ 2.33
CCND3-221ENST00000514588 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.63■■■□□ 2.33
CCND3-221ENST00000514588 DOCK1Q14185 1865 aa29.62■■■□□ 2.33
CCND3-221ENST00000514588 HOXD10P28358 340 aa29.62■■■□□ 2.33
CCND3-221ENST00000514588 GADL1Q6ZQY3 521 aa29.62■■■□□ 2.33
CCND3-221ENST00000514588 SSH3Q8TE77 659 aa29.62■■■□□ 2.33
CCND3-221ENST00000514588 GPR108Q9NPR9 543 aa29.62■■■□□ 2.33
CCND3-221ENST00000514588 FAM196BA6NMK8 535 aa29.61■■■□□ 2.33
CCND3-221ENST00000514588 ATP8B2P98198 1209 aa29.61■■■□□ 2.33
CCND3-221ENST00000514588 TNNI3KQ59H18 835 aa29.61■■■□□ 2.33
CCND3-221ENST00000514588 CCDC84Q86UT8 332 aaPredicted RBP29.61■■■□□ 2.33
CCND3-221ENST00000514588 LRP2BPQ9P2M1 347 aa29.61■■■□□ 2.33
CCND3-221ENST00000514588 FPGT-TNNI3KV9GXZ4 949 aa29.61■■■□□ 2.33
CCND3-221ENST00000514588 TRIM75PA6NK02 468 aa29.6■■■□□ 2.33
CCND3-221ENST00000514588 HNRNPUQ00839 825 aaKnown RBP eCLIP29.6■■■□□ 2.33
CCND3-221ENST00000514588 DBNDD2Q9BQY9 259 aa29.6■■■□□ 2.33
CCND3-221ENST00000514588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.6■■■□□ 2.33
CCND3-221ENST00000514588 SNRKQ9NRH2 765 aa29.6■■■□□ 2.33
CCND3-221ENST00000514588 SLC45A1Q9Y2W3 748 aa29.6■■■□□ 2.33
CCND3-221ENST00000514588 COL2A1P02458 1487 aaPredicted RBP29.6■■■□□ 2.33
CCND3-221ENST00000514588 PHIPQ8WWQ0 1821 aa29.59■■■□□ 2.33
CCND3-221ENST00000514588 RAET1EQ8TD07 263 aa29.59■■■□□ 2.33
CCND3-221ENST00000514588 OSBPL5Q9H0X9 879 aaPredicted RBP29.59■■■□□ 2.33
CCND3-221ENST00000514588 C1orf115Q9H7X2 142 aa29.59■■■□□ 2.33
CCND3-221ENST00000514588 MYPNQ86TC9 1320 aa29.59■■■□□ 2.33
CCND3-221ENST00000514588 PTPRFP10586 1907 aa29.58■■■□□ 2.33
CCND3-221ENST00000514588 OS9Q13438 667 aaPredicted RBP29.58■■■□□ 2.33
CCND3-221ENST00000514588 TEX11Q8IYF3 940 aa29.58■■■□□ 2.33
CCND3-221ENST00000514588 GRK4P32298 578 aa29.57■■■□□ 2.32
CCND3-221ENST00000514588 FCGRTP55899 365 aa29.57■■■□□ 2.32
CCND3-221ENST00000514588 MTFR1Q15390 333 aa29.57■■■□□ 2.32
CCND3-221ENST00000514588 TTC39AQ5SRH9 613 aa29.57■■■□□ 2.32
CCND3-221ENST00000514588 SH3RF3Q8TEJ3 882 aaPredicted RBP29.57■■■□□ 2.32
CCND3-221ENST00000514588 GCC1Q96CN9 775 aa29.57■■■□□ 2.32
CCND3-221ENST00000514588 SURF6O75683 361 aaKnown RBP29.56■■■□□ 2.32
CCND3-221ENST00000514588 PRKCZQ05513 592 aa29.56■■■□□ 2.32
CCND3-221ENST00000514588 CCDC158Q5M9N0 1113 aa29.56■■■□□ 2.32
CCND3-221ENST00000514588 FTSJ3Q8IY81 847 aaKnown RBP29.56■■■□□ 2.32
CCND3-221ENST00000514588 RLBP1P12271 317 aa29.55■■■□□ 2.32
CCND3-221ENST00000514588 MIER1Q8N108 512 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms