RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 HMMRO75330 724 aa28.23■■■□□ 2.11
CLDND1-230ENST00000514537 INPP5BP32019 993 aa28.23■■■□□ 2.11
CLDND1-230ENST00000514537 GTF2A2P52657 109 aa28.23■■■□□ 2.11
CLDND1-230ENST00000514537 SH3BP5LQ7L8J4 393 aa28.23■■■□□ 2.11
CLDND1-230ENST00000514537 CTU1Q7Z7A3 348 aaKnown RBP28.23■■■□□ 2.11
CLDND1-230ENST00000514537 NPM3O75607 178 aaKnown RBP28.22■■■□□ 2.11
CLDND1-230ENST00000514537 ZAP70P43403 619 aa28.22■■■□□ 2.11
CLDND1-230ENST00000514537 RHPN1Q8TCX5 695 aa28.22■■■□□ 2.11
CLDND1-230ENST00000514537 BRI3BPQ8WY22 251 aa28.22■■■□□ 2.11
CLDND1-230ENST00000514537 ATRNL1Q5VV63 1379 aa28.22■■■□□ 2.11
CLDND1-230ENST00000514537 IGSF3O75054 1194 aa28.21■■■□□ 2.11
CLDND1-230ENST00000514537 AACSQ86V21 672 aa28.21■■■□□ 2.11
CLDND1-230ENST00000514537 CCL15-CCL14A0A0B4J2E2 113 aa28.2■■■□□ 2.1
CLDND1-230ENST00000514537 DDTLA6NHG4 134 aaPredicted RBP28.2■■■□□ 2.1
CLDND1-230ENST00000514537 FKTNO75072 461 aa28.2■■■□□ 2.1
CLDND1-230ENST00000514537 MAP3K10Q02779 954 aa28.2■■■□□ 2.1
CLDND1-230ENST00000514537 PICALMQ13492 652 aa28.2■■■□□ 2.1
CLDND1-230ENST00000514537 CCL15Q16663 113 aa28.2■■■□□ 2.1
CLDND1-230ENST00000514537 NAA16Q6N069 864 aaPredicted RBP28.2■■■□□ 2.1
CLDND1-230ENST00000514537 ZSCAN29Q8IWY8 852 aaPredicted RBP28.2■■■□□ 2.1
CLDND1-230ENST00000514537 IL1RAPL2Q9NP60 686 aa28.2■■■□□ 2.1
CLDND1-230ENST00000514537 LAMB1P07942 1786 aa28.19■■■□□ 2.1
CLDND1-230ENST00000514537 IRF6O14896 467 aa28.19■■■□□ 2.1
CLDND1-230ENST00000514537 PPATQ06203 517 aa28.19■■■□□ 2.1
CLDND1-230ENST00000514537 PPIL2Q13356 520 aa28.19■■■□□ 2.1
CLDND1-230ENST00000514537 NOL9Q5SY16 702 aaKnown RBP28.19■■■□□ 2.1
CLDND1-230ENST00000514537 PIH1D3Q9NQM4 214 aaKnown RBP28.19■■■□□ 2.1
CLDND1-230ENST00000514537 CCDC85CA6NKD9 419 aa28.18■■■□□ 2.1
CLDND1-230ENST00000514537 PHF20L1A8MW92 1017 aa28.18■■■□□ 2.1
CLDND1-230ENST00000514537 KIF1BPQ96EK5 621 aa28.18■■■□□ 2.1
CLDND1-230ENST00000514537 CRHR2Q13324 411 aa28.17■■■□□ 2.1
CLDND1-230ENST00000514537 RAB11FIP3O75154 756 aa28.16■■■□□ 2.1
CLDND1-230ENST00000514537 CETPP11597 493 aa28.16■■■□□ 2.1
CLDND1-230ENST00000514537 PPP4CP60510 307 aa28.16■■■□□ 2.1
CLDND1-230ENST00000514537 SNAPC2Q13487 334 aa28.16■■■□□ 2.1
CLDND1-230ENST00000514537 CLASRPQ8N2M8 674 aaKnown RBP28.16■■■□□ 2.1
CLDND1-230ENST00000514537 BAG3O95817 575 aa28.15■■■□□ 2.1
CLDND1-230ENST00000514537 PKN2Q16513 984 aaKnown RBP28.15■■■□□ 2.1
CLDND1-230ENST00000514537 TEX11Q8IYF3 940 aa28.15■■■□□ 2.1
CLDND1-230ENST00000514537 FAM43AQ8N2R8 423 aa28.15■■■□□ 2.1
CLDND1-230ENST00000514537 NOL10Q9BSC4 688 aaKnown RBP28.15■■■□□ 2.1
CLDND1-230ENST00000514537 APBB1O00213 710 aa28.14■■■□□ 2.1
CLDND1-230ENST00000514537 ADGRA1Q86SQ6 560 aa28.14■■■□□ 2.1
CLDND1-230ENST00000514537 SH3RF3Q8TEJ3 882 aaPredicted RBP28.14■■■□□ 2.1
CLDND1-230ENST00000514537 AATFQ9NY61 560 aaKnown RBP eCLIP28.14■■■□□ 2.1
CLDND1-230ENST00000514537 TBC1D12O60347 775 aa28.13■■■□□ 2.09
CLDND1-230ENST00000514537 SLURP2P0DP57 97 aa28.13■■■□□ 2.09
CLDND1-230ENST00000514537 OSBPL5Q9H0X9 879 aaPredicted RBP28.13■■■□□ 2.09
CLDND1-230ENST00000514537 KCNH4Q9UQ05 1017 aa28.13■■■□□ 2.09
CLDND1-230ENST00000514537 NDUFB9Q9Y6M9 179 aa28.13■■■□□ 2.09
CLDND1-230ENST00000514537 AK9Q5TCS8 1911 aa28.13■■■□□ 2.09
CLDND1-230ENST00000514537 PLCG2P16885 1265 aa28.12■■■□□ 2.09
CLDND1-230ENST00000514537 SCYL3Q8IZE3 742 aa28.12■■■□□ 2.09
CLDND1-230ENST00000514537 ANTXR1Q9H6X2 564 aa28.12■■■□□ 2.09
CLDND1-230ENST00000514537 ZCCHC17Q9NP64 241 aaKnown RBP28.12■■■□□ 2.09
CLDND1-230ENST00000514537 BTBD19C9JJ37 291 aa28.11■■■□□ 2.09
CLDND1-230ENST00000514537 TAF1CQ15572 869 aaPredicted RBP28.11■■■□□ 2.09
CLDND1-230ENST00000514537 ZFYVE28Q9HCC9 887 aa28.11■■■□□ 2.09
CLDND1-230ENST00000514537 COL2A1P02458 1487 aaPredicted RBP28.1■■■□□ 2.09
CLDND1-230ENST00000514537 IDH1O75874 414 aaKnown RBP28.1■■■□□ 2.09
CLDND1-230ENST00000514537 IFIT2P09913 472 aaKnown RBP28.1■■■□□ 2.09
CLDND1-230ENST00000514537 CTNND1O60716 968 aaKnown RBP28.09■■■□□ 2.09
CLDND1-230ENST00000514537 CYP7A1P22680 504 aa28.09■■■□□ 2.09
CLDND1-230ENST00000514537 PTPRAP18433 802 aa28.08■■■□□ 2.09
CLDND1-230ENST00000514537 TMED8Q6PL24 325 aaPredicted RBP28.08■■■□□ 2.09
CLDND1-230ENST00000514537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.08■■■□□ 2.09
CLDND1-230ENST00000514537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.08■■■□□ 2.091e-6■■■□□ 18.4
CLDND1-230ENST00000514537 PICK1Q9NRD5 415 aa28.08■■■□□ 2.09
CLDND1-230ENST00000514537 CXCL11O14625 94 aa28.07■■■□□ 2.08
CLDND1-230ENST00000514537 SP3Q02447 781 aa28.07■■■□□ 2.08
CLDND1-230ENST00000514537 MAP3K12Q12852 859 aa28.07■■■□□ 2.08
CLDND1-230ENST00000514537 MOGSQ13724 837 aa28.07■■■□□ 2.08
CLDND1-230ENST00000514537 MAGEB6Q8N7X4 407 aa28.07■■■□□ 2.08
CLDND1-230ENST00000514537 TGFBRAP1Q8WUH2 860 aa28.07■■■□□ 2.08
CLDND1-230ENST00000514537 ERO1AQ96HE7 468 aa28.07■■■□□ 2.08
CLDND1-230ENST00000514537 HPS5Q9UPZ3 1129 aa28.07■■■□□ 2.08
CLDND1-230ENST00000514537 ZHX2Q9Y6X8 837 aa28.07■■■□□ 2.08
CLDND1-230ENST00000514537 FBXO46Q6PJ61 603 aaPredicted RBP28.06■■■□□ 2.08
CLDND1-230ENST00000514537 ANKRD23Q86SG2 305 aa28.06■■■□□ 2.08
CLDND1-230ENST00000514537 DHX36Q9H2U1 1008 aaKnown RBP28.06■■■□□ 2.08
CLDND1-230ENST00000514537 DOCK2Q92608 1830 aa28.06■■■□□ 2.08
CLDND1-230ENST00000514537 FAM196BA6NMK8 535 aa28.05■■■□□ 2.08
CLDND1-230ENST00000514537 DYNLL1P63167 89 aaKnown RBP28.05■■■□□ 2.08
CLDND1-230ENST00000514537 TTF1Q15361 905 aaPredicted RBP28.05■■■□□ 2.08
CLDND1-230ENST00000514537 MAPKAPK5Q8IW41 473 aa28.05■■■□□ 2.08
CLDND1-230ENST00000514537 PI4KBQ9UBF8 816 aa28.05■■■□□ 2.08
CLDND1-230ENST00000514537 AFG3L2Q9Y4W6 797 aa28.05■■■□□ 2.08
CLDND1-230ENST00000514537 MAST2Q6P0Q8 1798 aa28.04■■■□□ 2.08
CLDND1-230ENST00000514537 FLT1P17948 1338 aa28.04■■■□□ 2.08
CLDND1-230ENST00000514537 TLR2O60603 784 aa28.04■■■□□ 2.08
CLDND1-230ENST00000514537 OTOP1Q7RTM1 612 aa28.04■■■□□ 2.08
CLDND1-230ENST00000514537 CERS3Q8IU89 383 aa28.04■■■□□ 2.08
CLDND1-230ENST00000514537 CD99L2Q8TCZ2 262 aa28.04■■■□□ 2.08
CLDND1-230ENST00000514537 HERC5Q9UII4 1024 aaKnown RBP28.04■■■□□ 2.08
CLDND1-230ENST00000514537 TRIM17Q9Y577 477 aa28.04■■■□□ 2.08
CLDND1-230ENST00000514537 RGS19P49795 217 aa28.03■■■□□ 2.08
CLDND1-230ENST00000514537 MIGA1Q8NAN2 632 aa28.03■■■□□ 2.08
CLDND1-230ENST00000514537 LRRCC1Q9C099 1032 aa28.03■■■□□ 2.08
CLDND1-230ENST00000514537 BCL11AQ9H165 835 aa28.03■■■□□ 2.08
CLDND1-230ENST00000514537 PDHXO00330 501 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms