RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 TANGO6Q9C0B7 1094 aa16.95■□□□□ 0.3
USP38-202ENST00000510377 CUTAO60888 179 aa16.95■□□□□ 0.3
USP38-202ENST00000510377 PHKG2P15735 406 aa16.95■□□□□ 0.3
USP38-202ENST00000510377 KANK3Q6NY19 840 aa16.95■□□□□ 0.3
USP38-202ENST00000510377 SMARCC1Q92922 1105 aaPredicted RBP16.95■□□□□ 0.3
USP38-202ENST00000510377 KAZALD1Q96I82 304 aa16.95■□□□□ 0.3
USP38-202ENST00000510377 G3V3G9 751 aa16.95■□□□□ 0.3
USP38-202ENST00000510377 SF3B2Q13435 895 aaKnown RBP16.95■□□□□ 0.3
USP38-202ENST00000510377 DCAF8Q5TAQ9 597 aa16.95■□□□□ 0.3
USP38-202ENST00000510377 ZCRB1Q8TBF4 217 aaKnown RBP16.95■□□□□ 0.3
USP38-202ENST00000510377 PUS7LQ9H0K6 701 aaKnown RBP16.95■□□□□ 0.3
USP38-202ENST00000510377 TCHHQ07283 1943 aa16.95■□□□□ 0.3
USP38-202ENST00000510377 VWA3AA6NCI4 1184 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 SLC5A1P13866 664 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 SLC39A14Q15043 492 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 JADE2Q9NQC1 790 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 DLC1Q96QB1 1528 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 RABEP2Q9H5N1 569 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 POLR3EQ9NVU0 708 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 AXIN2Q9Y2T1 843 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 ZNF532Q9HCE3 1301 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 EXOC5O00471 708 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 ARHGEF25Q86VW2 580 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 CTCFLQ8NI51 663 aaPredicted RBP16.94■□□□□ 0.3
USP38-202ENST00000510377 SMARCC2Q8TAQ2 1214 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 DPF2Q92785 391 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 TMEM94Q12767 1356 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 PRDM1O75626 825 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 BICDL1Q6ZP65 573 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 CATIPQ7Z7H3 387 aa16.94■□□□□ 0.3
USP38-202ENST00000510377 PPP1R1BQ9UD71 204 aaPredicted RBP16.94■□□□□ 0.3
USP38-202ENST00000510377 MORC2Q9Y6X9 1032 aaPredicted RBP16.94■□□□□ 0.3
USP38-202ENST00000510377 HINFPQ9BQA5 517 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 ZNF609O15014 1411 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 CTDNEP1O95476 244 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 FKBP15Q5T1M5 1219 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 IQCA1Q86XH1 822 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 TSPYL1Q9H0U9 437 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 INCENPQ9NQS7 918 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 PLEKHG1Q9ULL1 1385 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 ITGA6P23229 1130 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 IGHMBP2P38935 993 aaKnown RBP16.93■□□□□ 0.3
USP38-202ENST00000510377 DHX37Q8IY37 1157 aaKnown RBP16.93■□□□□ 0.3
USP38-202ENST00000510377 CEP112Q8N8E3 955 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 CTNND2Q9UQB3 1225 aa16.93■□□□□ 0.3
USP38-202ENST00000510377 CYP7A1P22680 504 aa16.92■□□□□ 0.3
USP38-202ENST00000510377 CTR9Q6PD62 1173 aa16.92■□□□□ 0.3
USP38-202ENST00000510377 IBSPP21815 317 aaPredicted RBP16.92■□□□□ 0.3
USP38-202ENST00000510377 EFCAB8A8MWE9 144 aa16.92■□□□□ 0.3
USP38-202ENST00000510377 SSBP05455 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
USP38-202ENST00000510377 SMYD4Q8IYR2 804 aaPredicted RBP16.92■□□□□ 0.3
USP38-202ENST00000510377 TRIM47Q96LD4 638 aa16.92■□□□□ 0.3
USP38-202ENST00000510377 SLF1Q9BQI6 1058 aa16.92■□□□□ 0.3
USP38-202ENST00000510377 RNF41Q9H4P4 317 aaPredicted RBP16.92■□□□□ 0.3
USP38-202ENST00000510377 MED23Q9ULK4 1368 aa16.92■□□□□ 0.3
USP38-202ENST00000510377 KRT23Q9C075 422 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 BLZF1Q9H2G9 400 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 SH3TC1Q8TE82 1336 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 KIF28PB7ZC32 967 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 MCM7P33993 719 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 HNRNPH2P55795 449 aaKnown RBP16.91■□□□□ 0.3
USP38-202ENST00000510377 ZSCAN26Q16670 478 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 DNAJC21Q5F1R6 531 aaKnown RBP16.91■□□□□ 0.3
USP38-202ENST00000510377 SAMSN1Q9NSI8 373 aaKnown RBP16.91■□□□□ 0.3
USP38-202ENST00000510377 GNL3LQ9NVN8 582 aaKnown RBP16.91■□□□□ 0.3
USP38-202ENST00000510377 TAB2Q9NYJ8 693 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 POTEB2H3BUK9 544 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 SETQ01105 290 aaPredicted RBP16.91■□□□□ 0.3
USP38-202ENST00000510377 UBXN1Q04323 297 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 MLKLQ8NB16 471 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 EEF2KMTQ96G04 330 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 VPS54Q9P1Q0 977 aa16.91■□□□□ 0.3
USP38-202ENST00000510377 IRS4O14654 1257 aaPredicted RBP16.9■□□□□ 0.3
USP38-202ENST00000510377 TRIM21P19474 475 aaKnown RBP16.9■□□□□ 0.3
USP38-202ENST00000510377 MTIF2P46199 727 aaKnown RBP16.9■□□□□ 0.3
USP38-202ENST00000510377 AMOTL1Q8IY63 956 aa16.9■□□□□ 0.3
USP38-202ENST00000510377 FOXN1O15353 648 aa16.9■□□□□ 0.3
USP38-202ENST00000510377 RILPL1Q5EBL4 403 aa16.9■□□□□ 0.3
USP38-202ENST00000510377 CDK5RAP3Q96JB5 506 aa16.9■□□□□ 0.3
USP38-202ENST00000510377 TSGA10IPQ3SY00 556 aa16.9■□□□□ 0.3
USP38-202ENST00000510377 APOA5Q6Q788 366 aa16.9■□□□□ 0.3
USP38-202ENST00000510377 GPR161Q8N6U8 529 aaKnown RBP16.9■□□□□ 0.3
USP38-202ENST00000510377 OSBPL5Q9H0X9 879 aaPredicted RBP16.9■□□□□ 0.3
USP38-202ENST00000510377 ZHX3Q9H4I2 956 aa16.9■□□□□ 0.3
USP38-202ENST00000510377 SYNRGQ9UMZ2 1314 aa16.9■□□□□ 0.3
USP38-202ENST00000510377 UQCRFS1P1P0C7P4 283 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 NR5A1Q13285 461 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 SPA17Q15506 151 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.29
USP38-202ENST00000510377 HDXQ7Z353 690 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 NOSTRINQ8IVI9 506 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 TMEM87BQ96K49 555 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 V9GY48 417 aaPredicted RBP16.89■□□□□ 0.29
USP38-202ENST00000510377 CLSTN1O94985 981 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 PPARDQ03181 441 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 LRRN4CLQ8ND94 238 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 KCNB2Q92953 911 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 CTAGE1Q96RT6 745 aa16.89■□□□□ 0.29
USP38-202ENST00000510377 PARD6BQ9BYG5 372 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 284.4 ms