RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 AK9Q5TCS8 1911 aa25.98■■□□□ 1.75
UBE2D3-229ENST00000510129 COL2A1P02458 1487 aaPredicted RBP25.98■■□□□ 1.75
UBE2D3-229ENST00000510129 PPP4CP60510 307 aa25.97■■□□□ 1.75
UBE2D3-229ENST00000510129 ERO1BQ86YB8 467 aa25.97■■□□□ 1.75
UBE2D3-229ENST00000510129 CFHR5Q9BXR6 569 aa25.97■■□□□ 1.75
UBE2D3-229ENST00000510129 ATRNL1Q5VV63 1379 aa25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 SPDYE5A6NIY4 337 aa25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 IDH1O75874 414 aaKnown RBP25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 GTF2A2P52657 109 aa25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 PICALMQ13492 652 aa25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 NOM1Q5C9Z4 860 aaKnown RBP25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 MIGA2Q7L4E1 593 aa25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 DCTPP1Q9H773 170 aa25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 PIH1D3Q9NQM4 214 aaKnown RBP25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 ZNF112Q9UJU3 913 aa25.96■■□□□ 1.75
UBE2D3-229ENST00000510129 DOCK2Q92608 1830 aa25.95■■□□□ 1.75
UBE2D3-229ENST00000510129 TEX11Q8IYF3 940 aa25.95■■□□□ 1.74
UBE2D3-229ENST00000510129 IFNL1Q8IU54 200 aa25.94■■□□□ 1.74
UBE2D3-229ENST00000510129 SNCAIPQ9Y6H5 919 aa25.94■■□□□ 1.74
UBE2D3-229ENST00000510129 TESPA1A2RU30 521 aaPredicted RBP25.93■■□□□ 1.74
UBE2D3-229ENST00000510129 MAP3K10Q02779 954 aa25.93■■□□□ 1.74
UBE2D3-229ENST00000510129 PPATQ06203 517 aa25.93■■□□□ 1.74
UBE2D3-229ENST00000510129 NOL9Q5SY16 702 aaKnown RBP25.93■■□□□ 1.74
UBE2D3-229ENST00000510129 ZFPM1Q8IX07 1006 aa25.93■■□□□ 1.74
UBE2D3-229ENST00000510129 OTUD5Q96G74 571 aa25.93■■□□□ 1.74
UBE2D3-229ENST00000510129 DHX36Q9H2U1 1008 aaKnown RBP25.93■■□□□ 1.74
UBE2D3-229ENST00000510129 DDX4Q9NQI0 724 aaKnown RBP25.93■■□□□ 1.74
UBE2D3-229ENST00000510129 AATFQ9NY61 560 aaKnown RBP eCLIP25.93■■□□□ 1.746e-12■■□□□ 12.2
UBE2D3-229ENST00000510129 TBC1D12O60347 775 aa25.92■■□□□ 1.74
UBE2D3-229ENST00000510129 ATP5JP18859 108 aa25.92■■□□□ 1.74
UBE2D3-229ENST00000510129 CYP7A1P22680 504 aa25.92■■□□□ 1.74
UBE2D3-229ENST00000510129 ZKSCAN4Q969J2 545 aaPredicted RBP25.92■■□□□ 1.74
UBE2D3-229ENST00000510129 GPATCH3Q96I76 525 aa25.92■■□□□ 1.74
UBE2D3-229ENST00000510129 OSBPL5Q9H0X9 879 aaPredicted RBP25.92■■□□□ 1.74
UBE2D3-229ENST00000510129 GJA5P36382 358 aa25.91■■□□□ 1.74
UBE2D3-229ENST00000510129 PPIL2Q13356 520 aa25.91■■□□□ 1.74
UBE2D3-229ENST00000510129 MAGEB6Q8N7X4 407 aa25.91■■□□□ 1.74
UBE2D3-229ENST00000510129 SH3RF3Q8TEJ3 882 aaPredicted RBP25.91■■□□□ 1.74
UBE2D3-229ENST00000510129 DDTLA6NHG4 134 aaPredicted RBP25.9■■□□□ 1.74
UBE2D3-229ENST00000510129 CETPP11597 493 aa25.9■■□□□ 1.74
UBE2D3-229ENST00000510129 SNAPC2Q13487 334 aa25.9■■□□□ 1.74
UBE2D3-229ENST00000510129 CTNND1O60716 968 aaKnown RBP25.89■■□□□ 1.74
UBE2D3-229ENST00000510129 INPP5BP32019 993 aa25.89■■□□□ 1.74
UBE2D3-229ENST00000510129 SH3BP5LQ7L8J4 393 aa25.89■■□□□ 1.74
UBE2D3-229ENST00000510129 MS4A4AQ96JQ5 239 aa25.89■■□□□ 1.74
UBE2D3-229ENST00000510129 DNAJC2Q99543 621 aaKnown RBP25.89■■□□□ 1.74
UBE2D3-229ENST00000510129 BCL11AQ9H165 835 aa25.89■■□□□ 1.74
UBE2D3-229ENST00000510129 ANTXR1Q9H6X2 564 aa25.89■■□□□ 1.74
UBE2D3-229ENST00000510129 ZCCHC17Q9NP64 241 aaKnown RBP25.89■■□□□ 1.74
UBE2D3-229ENST00000510129 PICK1Q9NRD5 415 aa25.89■■□□□ 1.74
UBE2D3-229ENST00000510129 ADGRA1Q86SQ6 560 aa25.88■■□□□ 1.73
UBE2D3-229ENST00000510129 SCYL3Q8IZE3 742 aa25.88■■□□□ 1.73
UBE2D3-229ENST00000510129 CRBNQ96SW2 442 aa25.88■■□□□ 1.73
UBE2D3-229ENST00000510129 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.88■■□□□ 1.739e-7■■□□□ 13.5
UBE2D3-229ENST00000510129 PI4KBQ9UBF8 816 aa25.88■■□□□ 1.73
UBE2D3-229ENST00000510129 HERC5Q9UII4 1024 aaKnown RBP25.88■■□□□ 1.73
UBE2D3-229ENST00000510129 PCDHB15Q9Y5E8 787 aa25.88■■□□□ 1.73
UBE2D3-229ENST00000510129 MYO5AQ9Y4I1 1855 aaKnown RBP25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 CCL15-CCL14A0A0B4J2E2 113 aa25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 PHF20L1A8MW92 1017 aa25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 GOLIM4O00461 696 aa25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 TBC1D8O95759 1140 aa25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 CCL15Q16663 113 aa25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 SLC9C2Q5TAH2 1124 aa25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 HAUS7Q99871 368 aa25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 ECHDC1Q9NTX5 307 aa25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 PAG1Q9NWQ8 432 aa25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 NDUFB9Q9Y6M9 179 aa25.87■■□□□ 1.73
UBE2D3-229ENST00000510129 IGF2BP3O00425 579 aaKnown RBP eCLIP25.86■■□□□ 1.73
UBE2D3-229ENST00000510129 TGFBRAP1Q8WUH2 860 aa25.86■■□□□ 1.73
UBE2D3-229ENST00000510129 CNKSR2Q8WXI2 1034 aa25.86■■□□□ 1.73
UBE2D3-229ENST00000510129 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.86■■□□□ 1.73
UBE2D3-229ENST00000510129 ZBTB47Q9UFB7 747 aaPredicted RBP25.86■■□□□ 1.73
UBE2D3-229ENST00000510129 GPR25O00155 361 aa25.85■■□□□ 1.73
UBE2D3-229ENST00000510129 IRF6O14896 467 aa25.85■■□□□ 1.73
UBE2D3-229ENST00000510129 BOLA2Q9H3K6 86 aa25.85■■□□□ 1.73
UBE2D3-229ENST00000510129 FOCADQ5VW36 1801 aa25.85■■□□□ 1.73
UBE2D3-229ENST00000510129 CASP8AP2Q9UKL3 1982 aa25.85■■□□□ 1.73
UBE2D3-229ENST00000510129 FLT1P17948 1338 aa25.85■■□□□ 1.73
UBE2D3-229ENST00000510129 SMARCA5O60264 1052 aaPredicted RBP25.84■■□□□ 1.73
UBE2D3-229ENST00000510129 HLA-DOAP06340 250 aa25.84■■□□□ 1.73
UBE2D3-229ENST00000510129 FOXP4Q8IVH2 680 aaPredicted RBP25.84■■□□□ 1.73
UBE2D3-229ENST00000510129 TRIM34Q9BYJ4 488 aa25.84■■□□□ 1.73
UBE2D3-229ENST00000510129 KCNH4Q9UQ05 1017 aa25.84■■□□□ 1.73
UBE2D3-229ENST00000510129 PDE6AP16499 860 aa25.83■■□□□ 1.73
UBE2D3-229ENST00000510129 USP5P45974 858 aa25.83■■□□□ 1.73
UBE2D3-229ENST00000510129 ZSCAN25Q6NSZ9 544 aa25.83■■□□□ 1.73
UBE2D3-229ENST00000510129 MIGA1Q8NAN2 632 aa25.83■■□□□ 1.73
UBE2D3-229ENST00000510129 BRI3BPQ8WY22 251 aa25.83■■□□□ 1.73
UBE2D3-229ENST00000510129 GCC1Q96CN9 775 aa25.83■■□□□ 1.73
UBE2D3-229ENST00000510129 PTPN18Q99952 460 aa25.83■■□□□ 1.73
UBE2D3-229ENST00000510129 TBC1D2Q9BYX2 928 aa25.83■■□□□ 1.73
UBE2D3-229ENST00000510129 MAGEB6P1A0A0J9YX57 407 aa25.82■■□□□ 1.72
UBE2D3-229ENST00000510129 CXCL11O14625 94 aa25.82■■□□□ 1.72
UBE2D3-229ENST00000510129 FKTNO75072 461 aa25.82■■□□□ 1.72
UBE2D3-229ENST00000510129 HDAC1Q13547 482 aaPredicted RBP25.82■■□□□ 1.72
UBE2D3-229ENST00000510129 CTU1Q7Z7A3 348 aaKnown RBP25.82■■□□□ 1.72
UBE2D3-229ENST00000510129 MAPKAPK5Q8IW41 473 aa25.82■■□□□ 1.72
UBE2D3-229ENST00000510129 ZNF296Q8WUU4 475 aaPredicted RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms