RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 ANTXR2P58335 489 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 SBK1Q52WX2 424 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 CCDC83Q8IWF9 413 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 AMOTL1Q8IY63 956 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 NIM1KQ8IY84 436 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 FBXL16Q8N461 479 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 TGFBRAP1Q8WUH2 860 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 MCM9Q9NXL9 1143 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 CYP2D7A0A087X1C5 515 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 SLC3A2P08195 630 aaKnown RBP14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 RHBDL3P58872 404 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 RRP12Q5JTH9 1297 aaKnown RBP14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 HHIPL2Q6UWX4 724 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 KIAA0825Q8IV33 1275 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 STK11IPQ8N1F8 1099 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 NLGN2Q8NFZ4 835 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 TACC3Q9Y6A5 838 aa14.87□□□□□ -0.03
LYSMD3-204ENST00000509384 CHD4Q14839 1912 aa14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 KDM4AO75164 1064 aa14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 PCP11498 1178 aaKnown RBP14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 CRKP46108 304 aa14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 APOBRQ0VD83 1088 aa14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 STK3Q13188 491 aa14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 CYB5R4Q7L1T6 521 aa14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 MAPKAPK5Q8IW41 473 aa14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 NECAB1Q8N987 351 aa14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 INCENPQ9NQS7 918 aa14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 MKRN1Q9UHC7 482 aaKnown RBP14.86□□□□□ -0.03
LYSMD3-204ENST00000509384 FLT1P17948 1338 aa14.85□□□□□ -0.03
LYSMD3-204ENST00000509384 MYO3BQ8WXR4 1341 aa14.85□□□□□ -0.03
LYSMD3-204ENST00000509384 NFKBIEO00221 500 aa14.85□□□□□ -0.03
LYSMD3-204ENST00000509384 USP17L8P0C7I0 530 aa14.85□□□□□ -0.03
LYSMD3-204ENST00000509384 CYP2D6P10635 497 aa14.85□□□□□ -0.03
LYSMD3-204ENST00000509384 HDLBPQ00341 1268 aaKnown RBP14.85□□□□□ -0.03
LYSMD3-204ENST00000509384 ESR2Q92731 530 aa14.85□□□□□ -0.03
LYSMD3-204ENST00000509384 TMEM87BQ96K49 555 aa14.85□□□□□ -0.03
LYSMD3-204ENST00000509384 MRIQ9BWK5 157 aa14.85□□□□□ -0.03
LYSMD3-204ENST00000509384 ZNRF3Q9ULT6 936 aa14.85□□□□□ -0.03
LYSMD3-204ENST00000509384 COL4A5P29400 1685 aa14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 SH2B2O14492 632 aaPredicted RBP14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 RAD17O75943 681 aa14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 ST3GAL1Q11201 340 aa14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 RSBN1LQ6PCB5 846 aaPredicted RBP14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 NKX2-3Q8TAU0 364 aa14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 ZDHHC15Q96MV8 337 aa14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 GPHNQ9NQX3 736 aaPredicted RBP14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 SERPINA10Q9UK55 444 aa14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 NAP1L2Q9ULW6 460 aaPredicted RBP14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 ANGEL1Q9UNK9 670 aaKnown RBP14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 SMC3Q9UQE7 1217 aa14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 GOLGB1Q14789 3259 aaKnown RBP14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 LTBP3Q9NS15 1303 aa14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 MYH2Q9UKX2 1941 aa14.84□□□□□ -0.03
LYSMD3-204ENST00000509384 BRCA1P38398 1863 aaKnown RBP14.83□□□□□ -0.03
LYSMD3-204ENST00000509384 SMIM22K7EJ46 135 aa14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 PSMD14O00487 310 aa14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 POLR3DP05423 398 aaPredicted RBP14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 RBM5P52756 815 aaKnown RBP eCLIP14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 NUCB2P80303 420 aa14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 SART3Q15020 963 aaKnown RBP14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 SLC4A8Q2Y0W8 1093 aa14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 C12orf60Q5U649 245 aa14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 JDP2Q8WYK2 163 aa14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 ZNF274Q96GC6 653 aaPredicted RBP14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 USP40Q9NVE5 1235 aa14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 ZSWIM5Q9P217 1185 aa14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 SAP30BPQ9UHR5 308 aaKnown RBP14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 SCN9AQ15858 1988 aa14.83□□□□□ -0.04
LYSMD3-204ENST00000509384 KLF18A0A0U1RQI7 1052 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 IFIT3O14879 490 aaKnown RBP14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 PFKFB2O60825 505 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 VIL1P09327 827 aaKnown RBP14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 FGRP09769 529 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 EVCP57679 992 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 EVX2Q03828 476 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 PDE4BQ07343 736 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 RAB3GAP1Q15042 981 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 NFKBIBQ15653 356 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 TMEM67Q5HYA8 995 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 APOBEC3HQ6NTF7 200 aaKnown RBP14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 CDC42EP5Q6NZY7 148 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 MTA3Q9BTC8 594 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 ROBO3Q96MS0 1386 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 ERICH2A1L162 156 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 GOLGA8BA8MQT2 603 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 ORC4O43929 436 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 RANBP6O60518 1105 aaKnown RBP14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 PRDM1O75626 825 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 PDIA3P30101 505 aaKnown RBP14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 PICALMQ13492 652 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 IGDCC4Q8TDY8 1250 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 CHMP4CQ96CF2 233 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 UBAC1Q9BSL1 405 aa14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 FHDC1Q9C0D6 1143 aaPredicted RBP14.82□□□□□ -0.04
LYSMD3-204ENST00000509384 WDHD1O75717 1129 aaPredicted RBP14.81□□□□□ -0.04
LYSMD3-204ENST00000509384 GJB2P29033 226 aa14.81□□□□□ -0.04
LYSMD3-204ENST00000509384 NT5C2P49902 561 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms