RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 ATP5JP18859 108 aa20.6■□□□□ 0.89
CLDND1-219ENST00000508659 MAP3K9P80192 1104 aa20.6■□□□□ 0.89
CLDND1-219ENST00000508659 MIGA2Q7L4E1 593 aa20.6■□□□□ 0.89
CLDND1-219ENST00000508659 ZFPM1Q8IX07 1006 aa20.6■□□□□ 0.89
CLDND1-219ENST00000508659 SH3RF3Q8TEJ3 882 aaPredicted RBP20.6■□□□□ 0.89
CLDND1-219ENST00000508659 WNK4Q96J92 1243 aa20.6■□□□□ 0.89
CLDND1-219ENST00000508659 BOLA2Q9H3K6 86 aa20.6■□□□□ 0.89
CLDND1-219ENST00000508659 DOCK2Q92608 1830 aa20.6■□□□□ 0.89
CLDND1-219ENST00000508659 COL2A1P02458 1487 aaPredicted RBP20.59■□□□□ 0.89
CLDND1-219ENST00000508659 LBX1P52954 281 aa20.59■□□□□ 0.89
CLDND1-219ENST00000508659 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.59■□□□□ 0.89
CLDND1-219ENST00000508659 CERS3Q8IU89 383 aa20.59■□□□□ 0.89
CLDND1-219ENST00000508659 SAGE1Q9NXZ1 904 aa20.59■□□□□ 0.89
CLDND1-219ENST00000508659 ZBTB47Q9UFB7 747 aaPredicted RBP20.59■□□□□ 0.89
CLDND1-219ENST00000508659 TSKSQ9UJT2 592 aa20.59■□□□□ 0.89
CLDND1-219ENST00000508659 NPM3O75607 178 aaKnown RBP20.58■□□□□ 0.89
CLDND1-219ENST00000508659 HDAC1Q13547 482 aaPredicted RBP20.58■□□□□ 0.89
CLDND1-219ENST00000508659 MIGA1Q8NAN2 632 aa20.58■□□□□ 0.89
CLDND1-219ENST00000508659 OPTNQ96CV9 577 aa20.58■□□□□ 0.89
CLDND1-219ENST00000508659 OSBPL5Q9H0X9 879 aaPredicted RBP20.58■□□□□ 0.89
CLDND1-219ENST00000508659 ECHDC1Q9NTX5 307 aa20.58■□□□□ 0.89
CLDND1-219ENST00000508659 PAG1Q9NWQ8 432 aa20.58■□□□□ 0.89
CLDND1-219ENST00000508659 ATRNL1Q5VV63 1379 aa20.58■□□□□ 0.88
CLDND1-219ENST00000508659 MANSC4A6NHS7 340 aaPredicted RBP20.57■□□□□ 0.88
CLDND1-219ENST00000508659 PPP4CP60510 307 aa20.57■□□□□ 0.88
CLDND1-219ENST00000508659 HAUS7Q99871 368 aa20.57■□□□□ 0.88
CLDND1-219ENST00000508659 PRDM10Q9NQV6 1147 aa20.57■□□□□ 0.88
CLDND1-219ENST00000508659 DDTLA6NHG4 134 aaPredicted RBP20.56■□□□□ 0.88
CLDND1-219ENST00000508659 SLC9C2Q5TAH2 1124 aa20.56■□□□□ 0.88
CLDND1-219ENST00000508659 SH3BP5LQ7L8J4 393 aa20.56■□□□□ 0.88
CLDND1-219ENST00000508659 EXOC6Q8TAG9 804 aa20.56■□□□□ 0.88
CLDND1-219ENST00000508659 ZKSCAN4Q969J2 545 aaPredicted RBP20.56■□□□□ 0.88
CLDND1-219ENST00000508659 GCC1Q96CN9 775 aa20.56■□□□□ 0.88
CLDND1-219ENST00000508659 EDC3Q96F86 508 aaKnown RBP20.56■□□□□ 0.88
CLDND1-219ENST00000508659 SNCAIPQ9Y6H5 919 aa20.56■□□□□ 0.88
CLDND1-219ENST00000508659 FLT1P17948 1338 aa20.55■□□□□ 0.88
CLDND1-219ENST00000508659 PDE6AP16499 860 aa20.55■□□□□ 0.88
CLDND1-219ENST00000508659 COL13A1Q5TAT6 717 aaPredicted RBP20.55■□□□□ 0.88
CLDND1-219ENST00000508659 OTUD5Q96G74 571 aa20.55■□□□□ 0.88
CLDND1-219ENST00000508659 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.55■□□□□ 0.88
CLDND1-219ENST00000508659 RNF186Q9NXI6 227 aa20.55■□□□□ 0.88
CLDND1-219ENST00000508659 SPDYE5A6NIY4 337 aa20.54■□□□□ 0.88
CLDND1-219ENST00000508659 TRPA1O75762 1119 aa20.54■□□□□ 0.88
CLDND1-219ENST00000508659 INPP5BP32019 993 aa20.54■□□□□ 0.88
CLDND1-219ENST00000508659 GJA5P36382 358 aa20.54■□□□□ 0.88
CLDND1-219ENST00000508659 DYNLL1P63167 89 aaKnown RBP20.54■□□□□ 0.88
CLDND1-219ENST00000508659 TSHZ3Q63HK5 1081 aa20.54■□□□□ 0.88
CLDND1-219ENST00000508659 MAPKAPK5Q8IW41 473 aa20.54■□□□□ 0.88
CLDND1-219ENST00000508659 TGFBRAP1Q8WUH2 860 aa20.54■□□□□ 0.88
CLDND1-219ENST00000508659 CNKSR2Q8WXI2 1034 aa20.54■□□□□ 0.88
CLDND1-219ENST00000508659 MYO5AQ9Y4I1 1855 aaKnown RBP20.54■□□□□ 0.88
CLDND1-219ENST00000508659 TM4SF4P48230 202 aa20.53■□□□□ 0.88
CLDND1-219ENST00000508659 ERO1BQ86YB8 467 aa20.53■□□□□ 0.88
CLDND1-219ENST00000508659 ZNF112Q9UJU3 913 aa20.53■□□□□ 0.88
CLDND1-219ENST00000508659 TTC41PQ6P2S7 1318 aa20.53■□□□□ 0.88
CLDND1-219ENST00000508659 ZNF532Q9HCE3 1301 aa20.53■□□□□ 0.88
CLDND1-219ENST00000508659 INHBEP58166 350 aa20.52■□□□□ 0.88
CLDND1-219ENST00000508659 NOL9Q5SY16 702 aaKnown RBP20.52■□□□□ 0.88
CLDND1-219ENST00000508659 DHX36Q9H2U1 1008 aaKnown RBP20.52■□□□□ 0.88
CLDND1-219ENST00000508659 RWDD1Q9H446 243 aaPredicted RBP20.52■□□□□ 0.88
CLDND1-219ENST00000508659 AK9Q5TCS8 1911 aa20.51■□□□□ 0.87
CLDND1-219ENST00000508659 MAGEB6P1A0A0J9YX57 407 aa20.51■□□□□ 0.87
CLDND1-219ENST00000508659 ERC2O15083 957 aa20.51■□□□□ 0.87
CLDND1-219ENST00000508659 USP5P45974 858 aa20.51■□□□□ 0.87
CLDND1-219ENST00000508659 ANKRD45Q5TZF3 282 aa20.51■□□□□ 0.87
CLDND1-219ENST00000508659 LAMB1P07942 1786 aa20.51■□□□□ 0.87
CLDND1-219ENST00000508659 ALDH1A1P00352 501 aa20.5■□□□□ 0.87
CLDND1-219ENST00000508659 HLA-DOAP06340 250 aa20.5■□□□□ 0.87
CLDND1-219ENST00000508659 MX1P20591 662 aa20.5■□□□□ 0.87
CLDND1-219ENST00000508659 ADD2P35612 726 aa20.5■□□□□ 0.87
CLDND1-219ENST00000508659 GTF2A2P52657 109 aa20.5■□□□□ 0.87
CLDND1-219ENST00000508659 PPIL2Q13356 520 aa20.5■□□□□ 0.87
CLDND1-219ENST00000508659 ZSCAN25Q6NSZ9 544 aa20.5■□□□□ 0.87
CLDND1-219ENST00000508659 IFNL1Q8IU54 200 aa20.5■□□□□ 0.87
CLDND1-219ENST00000508659 RIOK1Q9BRS2 568 aaKnown RBP20.5■□□□□ 0.87
CLDND1-219ENST00000508659 TRIM34Q9BYJ4 488 aa20.5■□□□□ 0.87
CLDND1-219ENST00000508659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.5■□□□□ 0.871e-6■■■□□ 18.4
CLDND1-219ENST00000508659 PICK1Q9NRD5 415 aa20.5■□□□□ 0.87
CLDND1-219ENST00000508659 FOCADQ5VW36 1801 aa20.49■□□□□ 0.87
CLDND1-219ENST00000508659 TCRBV5S4A2TA0A5A2 114 aa20.49■□□□□ 0.87
CLDND1-219ENST00000508659 FAM196BA6NMK8 535 aa20.49■□□□□ 0.87
CLDND1-219ENST00000508659 IRX6P78412 446 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-219ENST00000508659 MAP3K10Q02779 954 aa20.49■□□□□ 0.87
CLDND1-219ENST00000508659 PPATQ06203 517 aa20.49■□□□□ 0.87
CLDND1-219ENST00000508659 SCYL3Q8IZE3 742 aa20.49■□□□□ 0.87
CLDND1-219ENST00000508659 OTUD7AQ8TE49 926 aaPredicted RBP20.49■□□□□ 0.87
CLDND1-219ENST00000508659 PI4KBQ9UBF8 816 aa20.49■□□□□ 0.87
CLDND1-219ENST00000508659 SAP30BPQ9UHR5 308 aaKnown RBP20.49■□□□□ 0.87
CLDND1-219ENST00000508659 HERC5Q9UII4 1024 aaKnown RBP20.49■□□□□ 0.87
CLDND1-219ENST00000508659 CCL15-CCL14A0A0B4J2E2 113 aa20.48■□□□□ 0.87
CLDND1-219ENST00000508659 PHF20L1A8MW92 1017 aa20.48■□□□□ 0.87
CLDND1-219ENST00000508659 IRF6O14896 467 aa20.48■□□□□ 0.87
CLDND1-219ENST00000508659 TBC1D12O60347 775 aa20.48■□□□□ 0.87
CLDND1-219ENST00000508659 GLRX3O76003 335 aaKnown RBP20.48■□□□□ 0.87
CLDND1-219ENST00000508659 SNAPC2Q13487 334 aa20.48■□□□□ 0.87
CLDND1-219ENST00000508659 CCL15Q16663 113 aa20.48■□□□□ 0.87
CLDND1-219ENST00000508659 OTUD7BQ6GQQ9 843 aa20.48■□□□□ 0.87
CLDND1-219ENST00000508659 TNS4Q8IZW8 715 aa20.48■□□□□ 0.87
CLDND1-219ENST00000508659 CRACR2BQ8N4Y2 399 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-219ENST00000508659 CRNKL1Q9BZJ0 848 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms