RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RHBDL3P58872 404 aa20■□□□□ 0.79
LMNA-222ENST00000508500 PPIL2Q13356 520 aa20■□□□□ 0.79
LMNA-222ENST00000508500 TNNI3KQ59H18 835 aa20■□□□□ 0.79
LMNA-222ENST00000508500 SPTY2D1Q68D10 685 aaPredicted RBP20■□□□□ 0.79
LMNA-222ENST00000508500 ERICH6Q7L0X2 663 aa20■□□□□ 0.79
LMNA-222ENST00000508500 FTSJ3Q8IY81 847 aaKnown RBP20■□□□□ 0.79
LMNA-222ENST00000508500 NSUN4Q96CB9 384 aaKnown RBP20■□□□□ 0.79
LMNA-222ENST00000508500 GPR108Q9NPR9 543 aa20■□□□□ 0.79
LMNA-222ENST00000508500 PCDH10Q9P2E7 1040 aa20■□□□□ 0.79
LMNA-222ENST00000508500 TRIM17Q9Y577 477 aa20■□□□□ 0.79
LMNA-222ENST00000508500 FPGT-TNNI3KV9GXZ4 949 aa20■□□□□ 0.79
LMNA-222ENST00000508500 DDTLA6NHG4 134 aaPredicted RBP19.99■□□□□ 0.79
LMNA-222ENST00000508500 PHF20L1A8MW92 1017 aa19.99■□□□□ 0.79
LMNA-222ENST00000508500 SURF6O75683 361 aaKnown RBP19.99■□□□□ 0.79
LMNA-222ENST00000508500 PPATQ06203 517 aa19.99■□□□□ 0.79
LMNA-222ENST00000508500 TAF1CQ15572 869 aaPredicted RBP19.99■□□□□ 0.79
LMNA-222ENST00000508500 PANK1Q8TE04 598 aa19.99■□□□□ 0.79
LMNA-222ENST00000508500 DBNDD2Q9BQY9 259 aa19.99■□□□□ 0.79
LMNA-222ENST00000508500 NOP58Q9Y2X3 529 aaKnown RBP19.99■□□□□ 0.79
LMNA-222ENST00000508500 KIAA0100Q14667 2235 aaKnown RBP19.99■□□□□ 0.79
LMNA-222ENST00000508500 BTBD19C9JJ37 291 aa19.98■□□□□ 0.79
LMNA-222ENST00000508500 SP3Q02447 781 aa19.98■□□□□ 0.79
LMNA-222ENST00000508500 MAP3K10Q02779 954 aa19.98■□□□□ 0.79
LMNA-222ENST00000508500 MOGSQ13724 837 aa19.98■□□□□ 0.79
LMNA-222ENST00000508500 NOL9Q5SY16 702 aaKnown RBP19.98■□□□□ 0.79
LMNA-222ENST00000508500 GORABQ5T7V8 394 aa19.98■□□□□ 0.79
LMNA-222ENST00000508500 MGAMO43451 1857 aa19.97■□□□□ 0.79
LMNA-222ENST00000508500 CETPP11597 493 aa19.97■□□□□ 0.79
LMNA-222ENST00000508500 SNAPC2Q13487 334 aa19.97■□□□□ 0.79
LMNA-222ENST00000508500 CEP85Q6P2H3 762 aa19.97■□□□□ 0.79
LMNA-222ENST00000508500 ERO1AQ96HE7 468 aa19.97■□□□□ 0.79
LMNA-222ENST00000508500 SNRKQ9NRH2 765 aa19.97■□□□□ 0.79
LMNA-222ENST00000508500 PICALMQ13492 652 aa19.96■□□□□ 0.79
LMNA-222ENST00000508500 SLF2Q8IX21 1173 aa19.96■□□□□ 0.79
LMNA-222ENST00000508500 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.96■□□□□ 0.79
LMNA-222ENST00000508500 ZFYVE28Q9HCC9 887 aa19.96■□□□□ 0.79
LMNA-222ENST00000508500 TLR7Q9NYK1 1049 aaKnown RBP19.96■□□□□ 0.79
LMNA-222ENST00000508500 KCNH4Q9UQ05 1017 aa19.96■□□□□ 0.79
LMNA-222ENST00000508500 PTPN22Q9Y2R2 807 aa19.96■□□□□ 0.79
LMNA-222ENST00000508500 POTEFA5A3E0 1075 aa19.95■□□□□ 0.78
LMNA-222ENST00000508500 UQCRFS1P1P0C7P4 283 aa19.95■□□□□ 0.78
LMNA-222ENST00000508500 OS9Q13438 667 aaPredicted RBP19.95■□□□□ 0.78
LMNA-222ENST00000508500 ARMC5Q96C12 935 aa19.95■□□□□ 0.78
LMNA-222ENST00000508500 EAF2Q96CJ1 260 aaPredicted RBP19.95■□□□□ 0.78
LMNA-222ENST00000508500 RAI14Q9P0K7 980 aa19.95■□□□□ 0.78
LMNA-222ENST00000508500 DBNLQ9UJU6 430 aaKnown RBP19.95■□□□□ 0.78
LMNA-222ENST00000508500 CYP2E1P05181 493 aaPredicted RBP19.94■□□□□ 0.78
LMNA-222ENST00000508500 ZCCHC17Q9NP64 241 aaKnown RBP19.94■□□□□ 0.78
LMNA-222ENST00000508500 MYH1P12882 1939 aa19.94■□□□□ 0.78
LMNA-222ENST00000508500 TLR2O60603 784 aa19.93■□□□□ 0.78
LMNA-222ENST00000508500 NPM3O75607 178 aaKnown RBP19.93■□□□□ 0.78
LMNA-222ENST00000508500 TTC39AQ5SRH9 613 aa19.93■□□□□ 0.78
LMNA-222ENST00000508500 ZSCAN29Q8IWY8 852 aaPredicted RBP19.93■□□□□ 0.78
LMNA-222ENST00000508500 ZNF512BQ96KM6 892 aaPredicted RBP19.93■□□□□ 0.78
LMNA-222ENST00000508500 CCDC8Q9H0W5 538 aaPredicted RBP19.93■□□□□ 0.78
LMNA-222ENST00000508500 EFCC1Q9HA90 598 aa19.93■□□□□ 0.78
LMNA-222ENST00000508500 DOCK3Q8IZD9 2030 aa19.93■□□□□ 0.78
LMNA-222ENST00000508500 LDHCP07864 332 aa19.92■□□□□ 0.78
LMNA-222ENST00000508500 CCDC158Q5M9N0 1113 aa19.92■□□□□ 0.78
LMNA-222ENST00000508500 ADGRA1Q86SQ6 560 aa19.92■□□□□ 0.78
LMNA-222ENST00000508500 SCYL3Q8IZE3 742 aa19.92■□□□□ 0.78
LMNA-222ENST00000508500 LRP2BPQ9P2M1 347 aa19.92■□□□□ 0.78
LMNA-222ENST00000508500 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.92■□□□□ 0.78
LMNA-222ENST00000508500 FAM196BA6NMK8 535 aa19.91■□□□□ 0.78
LMNA-222ENST00000508500 ZAP70P43403 619 aa19.91■□□□□ 0.78
LMNA-222ENST00000508500 GSTO1P78417 241 aa19.91■□□□□ 0.78
LMNA-222ENST00000508500 GPAT2Q6NUI2 795 aa19.91■□□□□ 0.78
LMNA-222ENST00000508500 ANKRD23Q86SG2 305 aa19.91■□□□□ 0.78
LMNA-222ENST00000508500 SH3RF3Q8TEJ3 882 aaPredicted RBP19.91■□□□□ 0.78
LMNA-222ENST00000508500 ARHGAP39Q9C0H5 1083 aa19.91■□□□□ 0.78
LMNA-222ENST00000508500 PIH1D3Q9NQM4 214 aaKnown RBP19.91■□□□□ 0.78
LMNA-222ENST00000508500 EXOC6BQ9Y2D4 811 aa19.91■□□□□ 0.78
LMNA-222ENST00000508500 ADGRA2Q96PE1 1338 aa19.91■□□□□ 0.78
LMNA-222ENST00000508500 COL2A1P02458 1487 aaPredicted RBP19.91■□□□□ 0.78
LMNA-222ENST00000508500 PTPRAP18433 802 aa19.9■□□□□ 0.78
LMNA-222ENST00000508500 CTGFP29279 349 aa19.9■□□□□ 0.78
LMNA-222ENST00000508500 C17orf99Q6UX52 265 aa19.9■□□□□ 0.78
LMNA-222ENST00000508500 CCDC84Q86UT8 332 aaPredicted RBP19.9■□□□□ 0.78
LMNA-222ENST00000508500 OSBPL5Q9H0X9 879 aaPredicted RBP19.9■□□□□ 0.78
LMNA-222ENST00000508500 AFG3L2Q9Y4W6 797 aa19.9■□□□□ 0.78
LMNA-222ENST00000508500 PDHXO00330 501 aa19.89■□□□□ 0.77
LMNA-222ENST00000508500 CXCL11O14625 94 aa19.89■□□□□ 0.77
LMNA-222ENST00000508500 TBC1D12O60347 775 aa19.89■□□□□ 0.77
LMNA-222ENST00000508500 MAP4K4O95819 1239 aaPredicted RBP19.89■□□□□ 0.77
LMNA-222ENST00000508500 RRP1BQ14684 758 aaKnown RBP19.89■□□□□ 0.77
LMNA-222ENST00000508500 AATFQ9NY61 560 aaKnown RBP eCLIP19.89■□□□□ 0.77
LMNA-222ENST00000508500 NDUFB9Q9Y6M9 179 aa19.89■□□□□ 0.77
LMNA-222ENST00000508500 ZHX2Q9Y6X8 837 aa19.89■□□□□ 0.77
LMNA-222ENST00000508500 LOC285556D6RIA3 1793 aa19.88■□□□□ 0.77
LMNA-222ENST00000508500 CTNND1O60716 968 aaKnown RBP19.88■□□□□ 0.77
LMNA-222ENST00000508500 PPP4CP60510 307 aa19.88■□□□□ 0.77
LMNA-222ENST00000508500 NAA16Q6N069 864 aaPredicted RBP19.88■□□□□ 0.77
LMNA-222ENST00000508500 SIRT2Q8IXJ6 389 aa19.88■□□□□ 0.77
LMNA-222ENST00000508500 TEX11Q8IYF3 940 aa19.88■□□□□ 0.77
LMNA-222ENST00000508500 CPA4Q9UI42 421 aa19.88■□□□□ 0.77
LMNA-222ENST00000508500 COG6Q9Y2V7 657 aa19.88■□□□□ 0.77
LMNA-222ENST00000508500 A0A0G2JLL6 359 aaPredicted RBP19.87■□□□□ 0.77
LMNA-222ENST00000508500 LACTBP83111 547 aaPredicted RBP19.87■□□□□ 0.77
LMNA-222ENST00000508500 PRRT2Q7Z6L0 340 aaPredicted RBP19.87■□□□□ 0.77
LMNA-222ENST00000508500 ZNF333Q96JL9 665 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms