RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 EXOC1Q9NV70 894 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 IMPACTQ9P2X3 320 aa12.23□□□□□ -0.45
PDLIM5-210ENST00000508216 WDR33Q9C0J8 1336 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 MBD4O95243 580 aa12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 NUCB1Q02818 461 aa12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 NSUN2Q08J23 767 aaKnown RBP eCLIP12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 PTK7Q13308 1070 aa12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 E2F5Q15329 346 aa12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 ZFYVE27Q5T4F4 411 aa12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 RBM43Q6ZSC3 357 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 USP48Q86UV5 1035 aa12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 ARL10Q8N8L6 244 aa12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 IWS1Q96ST2 819 aa12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 PUF60Q9UHX1 559 aaKnown RBP12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 CROTQ9UKG9 612 aa12.22□□□□□ -0.45
PDLIM5-210ENST00000508216 SETD1BQ9UPS6 1966 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 TTC21BQ7Z4L5 1316 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 GOLGA6L7A0A1B0GV03 622 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 BIN1O00499 593 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 MARCH6O60337 910 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 PIK3C2GO75747 1445 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 CCDC159P0C7I6 412 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 NAT2P11245 290 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 CCT5P48643 541 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 PSME1Q06323 249 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 WDR43Q15061 677 aaKnown RBP eCLIP12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 PANK1Q8TE04 598 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 TAF4BQ92750 862 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 GOLGA1Q92805 767 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 PPP1R13BQ96KQ4 1090 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 ATXN10Q9UBB4 475 aa12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 HOOK1Q9UJC3 728 aaKnown RBP12.21□□□□□ -0.45
PDLIM5-210ENST00000508216 TCHHQ07283 1943 aa12.21□□□□□ -0.46
PDLIM5-210ENST00000508216 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.46
PDLIM5-210ENST00000508216 GPR75-ASB3A0A0A6YYF3 556 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 NPHP1O15259 732 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 KIF4AO95239 1232 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 LINGO3P0C6S8 592 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 GNAT1P11488 350 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 TRIM21P19474 475 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 NEK2P51955 445 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 CCDC144BQ3MJ40 725 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 TMC6Q7Z403 805 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 SESTD1Q86VW0 696 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 FAM228AQ86W67 206 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 DRC7Q8IY82 874 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 CCDC144CPQ8IYA2 1237 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 LRRC43Q8N309 656 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 TEX9Q8N6V9 391 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 MAML3Q96JK9 1138 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 NRBP1Q9UHY1 535 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 PAIP2BQ9ULR5 123 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 ASB3Q9Y575 518 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 N6AMT1Q9Y5N5 214 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 PLA2R1Q13018 1463 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 BICDL2A1A5D9 508 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 EVI5O60447 810 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 VIMP08670 466 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 GNAQP50148 359 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 CCT8P50990 548 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 SCNN1BP51168 640 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 NUTM2DQ5VT03 806 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 OLFML1Q6UWY5 402 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 TMEM92Q6UXU6 159 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 FCHSD1Q86WN1 690 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 ZGPATQ8N5A5 531 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 ZBTB8BQ8NAP8 495 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 RSPH1Q8WYR4 309 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 CNKSR1Q969H4 720 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 MTRQ99707 1265 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 TRIM5Q9C035 493 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 SLC40A1Q9NP59 571 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 SCUBE2Q9NQ36 999 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 TPX2Q9ULW0 747 aaKnown RBP12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 PARP3Q9Y6F1 533 aa12.2□□□□□ -0.46
PDLIM5-210ENST00000508216 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 EIF3HO15372 352 aaKnown RBP eCLIP12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 CDC45O75419 566 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 TRIM37O94972 964 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 PDE4BQ07343 736 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 RIPK1Q13546 671 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 TUBB2AQ13885 445 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 MFSD10Q14728 455 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 PARP10Q53GL7 1025 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 CYB5D1Q6P9G0 228 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 TBC1D9Q6ZT07 1266 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 SAPCD2Q86UD0 394 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 TRIM11Q96F44 468 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 NAP1L3Q99457 506 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 SH3GL1Q99961 368 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 TUBB2BQ9BVA1 445 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 TTLL3Q9Y4R7 772 aa12.19□□□□□ -0.46
PDLIM5-210ENST00000508216 ABCC11Q96J66 1382 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms