RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 PCNX4Q63HM2 1172 aa8.5□□□□□ -1.05
UBE2D3-218ENST00000505009 ZNF765Q7L2R6 523 aa8.5□□□□□ -1.05
UBE2D3-218ENST00000505009 FAM161BQ96MY7 647 aa8.5□□□□□ -1.05
UBE2D3-218ENST00000505009 AK5Q9Y6K8 562 aa8.5□□□□□ -1.05
UBE2D3-218ENST00000505009 RNGTTO60942 597 aaKnown RBP8.49□□□□□ -1.05
UBE2D3-218ENST00000505009 FGD1P98174 961 aa8.49□□□□□ -1.05
UBE2D3-218ENST00000505009 LLGL2Q6P1M3 1020 aa8.49□□□□□ -1.05
UBE2D3-218ENST00000505009 INTS5Q6P9B9 1019 aaKnown RBP8.49□□□□□ -1.05
UBE2D3-218ENST00000505009 DTX1Q86Y01 620 aa8.49□□□□□ -1.05
UBE2D3-218ENST00000505009 SMYD4Q8IYR2 804 aaPredicted RBP8.49□□□□□ -1.05
UBE2D3-218ENST00000505009 GIMAP7Q8NHV1 300 aa8.49□□□□□ -1.05
UBE2D3-218ENST00000505009 FRMD6Q96NE9 622 aa8.49□□□□□ -1.05
UBE2D3-218ENST00000505009 PARP2Q9UGN5 583 aa8.49□□□□□ -1.05
UBE2D3-218ENST00000505009 DCDC2CA8MYV0 355 aa8.48□□□□□ -1.05
UBE2D3-218ENST00000505009 FOSL1P15407 271 aa8.48□□□□□ -1.05
UBE2D3-218ENST00000505009 PTPN11Q06124 597 aaPredicted RBP8.48□□□□□ -1.05
UBE2D3-218ENST00000505009 MEI1Q5TIA1 1274 aa8.48□□□□□ -1.05
UBE2D3-218ENST00000505009 FBXO33Q7Z6M2 555 aa8.48□□□□□ -1.05
UBE2D3-218ENST00000505009 ISL2Q96A47 359 aa8.48□□□□□ -1.05
UBE2D3-218ENST00000505009 SAMM50Q9Y512 469 aa8.48□□□□□ -1.05
UBE2D3-218ENST00000505009 TRIM37O94972 964 aa8.47□□□□□ -1.05
UBE2D3-218ENST00000505009 HNRNPUQ00839 825 aaKnown RBP eCLIP8.47□□□□□ -1.05
UBE2D3-218ENST00000505009 MSMPQ1L6U9 139 aa8.47□□□□□ -1.05
UBE2D3-218ENST00000505009 PPM1JQ5JR12 505 aa8.47□□□□□ -1.05
UBE2D3-218ENST00000505009 C12orf40Q86WS4 652 aa8.47□□□□□ -1.05
UBE2D3-218ENST00000505009 METTL22Q9BUU2 404 aaPredicted RBP8.47□□□□□ -1.05
UBE2D3-218ENST00000505009 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
UBE2D3-218ENST00000505009 CYP26A1O43174 497 aa8.46□□□□□ -1.06
UBE2D3-218ENST00000505009 NTF4P34130 210 aa8.46□□□□□ -1.06
UBE2D3-218ENST00000505009 ERVK-24P63145 666 aa8.46□□□□□ -1.06
UBE2D3-218ENST00000505009 CCDC27Q2M243 656 aa8.46□□□□□ -1.06
UBE2D3-218ENST00000505009 SV2BQ7L1I2 683 aa8.46□□□□□ -1.06
UBE2D3-218ENST00000505009 UBE3DQ7Z6J8 389 aa8.46□□□□□ -1.06
UBE2D3-218ENST00000505009 PCDHA4Q9UN74 947 aa8.46□□□□□ -1.06
UBE2D3-218ENST00000505009 LEFTY1O75610 366 aa8.45□□□□□ -1.06
UBE2D3-218ENST00000505009 FAM87AP0C7U9 286 aa8.45□□□□□ -1.06
UBE2D3-218ENST00000505009 DAB2P98082 770 aa8.45□□□□□ -1.06
UBE2D3-218ENST00000505009 CCDC85BQ15834 202 aaPredicted RBP8.45□□□□□ -1.06
UBE2D3-218ENST00000505009 TTBK2Q6IQ55 1244 aa8.45□□□□□ -1.06
UBE2D3-218ENST00000505009 OGFOD3Q6PK18 319 aa8.45□□□□□ -1.06
UBE2D3-218ENST00000505009 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.45□□□□□ -1.06
UBE2D3-218ENST00000505009 RNF214Q8ND24 703 aa8.45□□□□□ -1.06
UBE2D3-218ENST00000505009 GAL3ST3Q96A11 431 aa8.45□□□□□ -1.06
UBE2D3-218ENST00000505009 PSMD2Q13200 908 aa8.44□□□□□ -1.06
UBE2D3-218ENST00000505009 INPP5AQ14642 412 aa8.44□□□□□ -1.06
UBE2D3-218ENST00000505009 LRRC14Q15048 493 aa8.44□□□□□ -1.06
UBE2D3-218ENST00000505009 MAP3K11Q16584 847 aa8.44□□□□□ -1.06
UBE2D3-218ENST00000505009 CPSF6Q16630 551 aaKnown RBP eCLIP8.44□□□□□ -1.06
UBE2D3-218ENST00000505009 DUSP27Q5VZP5 1158 aa8.44□□□□□ -1.06
UBE2D3-218ENST00000505009 CYP8B1Q9UNU6 501 aa8.44□□□□□ -1.06
UBE2D3-218ENST00000505009 CTSHP09668 335 aa8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 CDK8P49336 464 aa8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 GP2P55259 537 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 RING1Q06587 406 aa8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 LRFN4Q6PJG9 635 aa8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 PSMG3-AS1Q96PY0 264 aa8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 SSU72Q9NP77 194 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 ZC3H7BQ9UGR2 993 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 PCOLCE2Q9UKZ9 415 aa8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 PCDHB5Q9Y5E4 795 aa8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 OAS3Q9Y6K5 1087 aaKnown RBP8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 U3KQE9 123 aa8.43□□□□□ -1.06
UBE2D3-218ENST00000505009 CYP27A1Q02318 531 aa8.42□□□□□ -1.06
UBE2D3-218ENST00000505009 NFXL1Q6ZNB6 911 aa8.42□□□□□ -1.06
UBE2D3-218ENST00000505009 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.42□□□□□ -1.06
UBE2D3-218ENST00000505009 SEPT6Q14141 434 aa8.41□□□□□ -1.06
UBE2D3-218ENST00000505009 TMC4Q7Z404 712 aa8.41□□□□□ -1.06
UBE2D3-218ENST00000505009 FAM181AQ8N9Y4 354 aa8.41□□□□□ -1.06
UBE2D3-218ENST00000505009 PLPPR2Q96GM1 343 aa8.41□□□□□ -1.06
UBE2D3-218ENST00000505009 DUSP23Q9BVJ7 150 aa8.41□□□□□ -1.06
UBE2D3-218ENST00000505009 PICK1Q9NRD5 415 aa8.41□□□□□ -1.06
UBE2D3-218ENST00000505009 WNT11O96014 354 aa8.4□□□□□ -1.06
UBE2D3-218ENST00000505009 LIG3P49916 1009 aa8.4□□□□□ -1.06
UBE2D3-218ENST00000505009 XPCQ01831 940 aaPredicted RBP8.4□□□□□ -1.06
UBE2D3-218ENST00000505009 ZBTB37Q5TC79 503 aa8.4□□□□□ -1.06
UBE2D3-218ENST00000505009 TOP6BLQ8N6T0 577 aa8.4□□□□□ -1.06
UBE2D3-218ENST00000505009 ELMO3Q96BJ8 720 aa8.4□□□□□ -1.06
UBE2D3-218ENST00000505009 CCDC39Q9UFE4 941 aa8.4□□□□□ -1.06
UBE2D3-218ENST00000505009 PRAMEF27A3QJZ7 478 aa8.39□□□□□ -1.07
UBE2D3-218ENST00000505009 F6X3S4 739 aa8.39□□□□□ -1.07
UBE2D3-218ENST00000505009 CYP27C1Q4G0S4 372 aa8.39□□□□□ -1.07
UBE2D3-218ENST00000505009 FANCGO15287 622 aa8.38□□□□□ -1.07
UBE2D3-218ENST00000505009 PRNPP04156 253 aa8.38□□□□□ -1.07
UBE2D3-218ENST00000505009 ERCC3P19447 782 aa8.38□□□□□ -1.07
UBE2D3-218ENST00000505009 SCARA3Q6AZY7 606 aa8.38□□□□□ -1.07
UBE2D3-218ENST00000505009 CYFIP1Q7L576 1253 aa8.38□□□□□ -1.07
UBE2D3-218ENST00000505009 TLR6Q9Y2C9 796 aa8.38□□□□□ -1.07
UBE2D3-218ENST00000505009 TFE3P19532 575 aaPredicted RBP8.37□□□□□ -1.07
UBE2D3-218ENST00000505009 TAF1CQ15572 869 aaPredicted RBP8.37□□□□□ -1.07
UBE2D3-218ENST00000505009 WIPI1Q5MNZ9 446 aaPredicted RBP8.37□□□□□ -1.07
UBE2D3-218ENST00000505009 AGMOQ6ZNB7 445 aa8.37□□□□□ -1.07
UBE2D3-218ENST00000505009 PLD6Q8N2A8 252 aaKnown RBP8.37□□□□□ -1.07
UBE2D3-218ENST00000505009 FBRSQ9HAH7 460 aa8.37□□□□□ -1.07
UBE2D3-218ENST00000505009 BSDC1Q9NW68 430 aaPredicted RBP8.37□□□□□ -1.07
UBE2D3-218ENST00000505009 ANGEL1Q9UNK9 670 aaKnown RBP8.37□□□□□ -1.07
UBE2D3-218ENST00000505009 RBAK-RBAKDNI3L0D1 243 aa8.36□□□□□ -1.07
UBE2D3-218ENST00000505009 RPS26P62854 115 aaKnown RBP8.36□□□□□ -1.07
UBE2D3-218ENST00000505009 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
UBE2D3-218ENST00000505009 SORBS3O60504 671 aa8.35□□□□□ -1.07
UBE2D3-218ENST00000505009 ST13P50502 369 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms