RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 ERO1BQ86YB8 467 aa31.07■■■□□ 2.56
PVT1-201ENST00000504719 OTUD5Q96G74 571 aa31.07■■■□□ 2.56
PVT1-201ENST00000504719 DDX4Q9NQI0 724 aaKnown RBP31.07■■■□□ 2.56
PVT1-201ENST00000504719 INPP5BP32019 993 aa31.06■■■□□ 2.56
PVT1-201ENST00000504719 GTF2A2P52657 109 aa31.06■■■□□ 2.56
PVT1-201ENST00000504719 HSP90AB4PQ58FF6 505 aa31.06■■■□□ 2.56
PVT1-201ENST00000504719 MAST2Q6P0Q8 1798 aa31.06■■■□□ 2.56
PVT1-201ENST00000504719 CYP2E1P05181 493 aaPredicted RBP31.05■■■□□ 2.56
PVT1-201ENST00000504719 SH3BP5LQ7L8J4 393 aa31.05■■■□□ 2.56
PVT1-201ENST00000504719 SIRT2Q8IXJ6 389 aa31.05■■■□□ 2.56
PVT1-201ENST00000504719 ATRNL1Q5VV63 1379 aa31.05■■■□□ 2.56
PVT1-201ENST00000504719 MAP4K4O95819 1239 aaPredicted RBP31.04■■■□□ 2.56
PVT1-201ENST00000504719 ZAP70P43403 619 aa31.04■■■□□ 2.56
PVT1-201ENST00000504719 BRI3BPQ8WY22 251 aa31.04■■■□□ 2.56
PVT1-201ENST00000504719 FKTNO75072 461 aa31.03■■■□□ 2.56
PVT1-201ENST00000504719 HMMRO75330 724 aa31.03■■■□□ 2.56
PVT1-201ENST00000504719 PICALMQ13492 652 aa31.03■■■□□ 2.56
PVT1-201ENST00000504719 RHPN1Q8TCX5 695 aa31.03■■■□□ 2.56
PVT1-201ENST00000504719 CCL15-CCL14A0A0B4J2E2 113 aa31.02■■■□□ 2.56
PVT1-201ENST00000504719 DDTLA6NHG4 134 aaPredicted RBP31.02■■■□□ 2.56
PVT1-201ENST00000504719 CCDC85CA6NKD9 419 aa31.02■■■□□ 2.56
PVT1-201ENST00000504719 NPM3O75607 178 aaKnown RBP31.02■■■□□ 2.56
PVT1-201ENST00000504719 PPIL2Q13356 520 aa31.02■■■□□ 2.56
PVT1-201ENST00000504719 CCL15Q16663 113 aa31.02■■■□□ 2.56
PVT1-201ENST00000504719 AACSQ86V21 672 aa31.02■■■□□ 2.56
PVT1-201ENST00000504719 IGSF3O75054 1194 aa31.01■■■□□ 2.55
PVT1-201ENST00000504719 PPATQ06203 517 aa31.01■■■□□ 2.55
PVT1-201ENST00000504719 NOL9Q5SY16 702 aaKnown RBP31.01■■■□□ 2.55
PVT1-201ENST00000504719 ZSCAN29Q8IWY8 852 aaPredicted RBP31.01■■■□□ 2.55
PVT1-201ENST00000504719 IRF6O14896 467 aa31■■■□□ 2.55
PVT1-201ENST00000504719 MAP3K10Q02779 954 aa31■■■□□ 2.55
PVT1-201ENST00000504719 NAA16Q6N069 864 aaPredicted RBP31■■■□□ 2.55
PVT1-201ENST00000504719 IL1RAPL2Q9NP60 686 aa31■■■□□ 2.55
PVT1-201ENST00000504719 CRHR2Q13324 411 aa30.99■■■□□ 2.55
PVT1-201ENST00000504719 PIH1D3Q9NQM4 214 aaKnown RBP30.99■■■□□ 2.55
PVT1-201ENST00000504719 PHF20L1A8MW92 1017 aa30.98■■■□□ 2.55
PVT1-201ENST00000504719 CETPP11597 493 aa30.98■■■□□ 2.55
PVT1-201ENST00000504719 KIF1BPQ96EK5 621 aa30.98■■■□□ 2.55
PVT1-201ENST00000504719 CDK5RAP2Q96SN8 1893 aa30.97■■■□□ 2.55
PVT1-201ENST00000504719 SNAPC2Q13487 334 aa30.97■■■□□ 2.55
PVT1-201ENST00000504719 PKN2Q16513 984 aaKnown RBP30.97■■■□□ 2.55
PVT1-201ENST00000504719 NOL10Q9BSC4 688 aaKnown RBP30.97■■■□□ 2.55
PVT1-201ENST00000504719 TEX11Q8IYF3 940 aa30.96■■■□□ 2.55
PVT1-201ENST00000504719 FAM43AQ8N2R8 423 aa30.96■■■□□ 2.55
PVT1-201ENST00000504719 AATFQ9NY61 560 aaKnown RBP eCLIP30.96■■■□□ 2.55
PVT1-201ENST00000504719 COL2A1P02458 1487 aaPredicted RBP30.95■■■□□ 2.55
PVT1-201ENST00000504719 APBB1O00213 710 aa30.95■■■□□ 2.55
PVT1-201ENST00000504719 RAB11FIP3O75154 756 aa30.95■■■□□ 2.55
PVT1-201ENST00000504719 BAG3O95817 575 aa30.95■■■□□ 2.55
PVT1-201ENST00000504719 SLURP2P0DP57 97 aa30.95■■■□□ 2.55
PVT1-201ENST00000504719 PPP4CP60510 307 aa30.95■■■□□ 2.55
PVT1-201ENST00000504719 ADGRA1Q86SQ6 560 aa30.95■■■□□ 2.55
PVT1-201ENST00000504719 CLASRPQ8N2M8 674 aaKnown RBP30.95■■■□□ 2.55
PVT1-201ENST00000504719 SH3RF3Q8TEJ3 882 aaPredicted RBP30.95■■■□□ 2.55
PVT1-201ENST00000504719 OSBPL5Q9H0X9 879 aaPredicted RBP30.95■■■□□ 2.55
PVT1-201ENST00000504719 FOCADQ5VW36 1801 aa30.94■■■□□ 2.54
PVT1-201ENST00000504719 KCNH4Q9UQ05 1017 aa30.94■■■□□ 2.54
PVT1-201ENST00000504719 NDUFB9Q9Y6M9 179 aa30.94■■■□□ 2.54
PVT1-201ENST00000504719 TBC1D12O60347 775 aa30.93■■■□□ 2.54
PVT1-201ENST00000504719 PLCG2P16885 1265 aa30.93■■■□□ 2.54
PVT1-201ENST00000504719 TAF1CQ15572 869 aaPredicted RBP30.93■■■□□ 2.54
PVT1-201ENST00000504719 SCYL3Q8IZE3 742 aa30.93■■■□□ 2.54
PVT1-201ENST00000504719 ZFYVE28Q9HCC9 887 aa30.93■■■□□ 2.54
PVT1-201ENST00000504719 DOCK1Q14185 1865 aa30.93■■■□□ 2.54
PVT1-201ENST00000504719 BTBD19C9JJ37 291 aa30.92■■■□□ 2.54
PVT1-201ENST00000504719 ZCCHC17Q9NP64 241 aaKnown RBP30.92■■■□□ 2.54
PVT1-201ENST00000504719 ANTXR1Q9H6X2 564 aa30.91■■■□□ 2.54
PVT1-201ENST00000504719 PHIPQ8WWQ0 1821 aa30.9■■■□□ 2.54
PVT1-201ENST00000504719 IDH1O75874 414 aaKnown RBP30.9■■■□□ 2.54
PVT1-201ENST00000504719 ERO1AQ96HE7 468 aa30.9■■■□□ 2.54
PVT1-201ENST00000504719 CRBNQ96SW2 442 aa30.9■■■□□ 2.54
PVT1-201ENST00000504719 CTNND1O60716 968 aaKnown RBP30.89■■■□□ 2.54
PVT1-201ENST00000504719 IFIT2P09913 472 aaKnown RBP30.89■■■□□ 2.54
PVT1-201ENST00000504719 CYP7A1P22680 504 aa30.89■■■□□ 2.54
PVT1-201ENST00000504719 SP3Q02447 781 aa30.89■■■□□ 2.54
PVT1-201ENST00000504719 PICK1Q9NRD5 415 aa30.89■■■□□ 2.54
PVT1-201ENST00000504719 HPS5Q9UPZ3 1129 aa30.89■■■□□ 2.54
PVT1-201ENST00000504719 CXCL11O14625 94 aa30.88■■■□□ 2.53
PVT1-201ENST00000504719 PTPRAP18433 802 aa30.88■■■□□ 2.53
PVT1-201ENST00000504719 FBXO46Q6PJ61 603 aaPredicted RBP30.88■■■□□ 2.53
PVT1-201ENST00000504719 CD99L2Q8TCZ2 262 aa30.88■■■□□ 2.53
PVT1-201ENST00000504719 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.88■■■□□ 2.53
PVT1-201ENST00000504719 TGFBRAP1Q8WUH2 860 aa30.88■■■□□ 2.53
PVT1-201ENST00000504719 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.88■■■□□ 2.533e-9■■■■□ 25.5
PVT1-201ENST00000504719 SIPA1L1O43166 1804 aa30.87■■■□□ 2.53
PVT1-201ENST00000504719 DYNLL1P63167 89 aaKnown RBP30.87■■■□□ 2.53
PVT1-201ENST00000504719 MOGSQ13724 837 aa30.87■■■□□ 2.53
PVT1-201ENST00000504719 ANKRD23Q86SG2 305 aa30.87■■■□□ 2.53
PVT1-201ENST00000504719 MAGEB6Q8N7X4 407 aa30.87■■■□□ 2.53
PVT1-201ENST00000504719 ZHX2Q9Y6X8 837 aa30.87■■■□□ 2.53
PVT1-201ENST00000504719 FAM196BA6NMK8 535 aa30.86■■■□□ 2.53
PVT1-201ENST00000504719 MAP3K12Q12852 859 aa30.86■■■□□ 2.53
PVT1-201ENST00000504719 TMED8Q6PL24 325 aaPredicted RBP30.86■■■□□ 2.53
PVT1-201ENST00000504719 OTOP1Q7RTM1 612 aa30.86■■■□□ 2.53
PVT1-201ENST00000504719 MAPKAPK5Q8IW41 473 aa30.86■■■□□ 2.53
PVT1-201ENST00000504719 DHX36Q9H2U1 1008 aaKnown RBP30.86■■■□□ 2.53
PVT1-201ENST00000504719 TRIM17Q9Y577 477 aa30.86■■■□□ 2.53
PVT1-201ENST00000504719 SUPT16HQ9Y5B9 1047 aaKnown RBP30.86■■■□□ 2.53
PVT1-201ENST00000504719 ATAD5Q96QE3 1844 aa30.86■■■□□ 2.53
PVT1-201ENST00000504719 PTPRFP10586 1907 aa30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms