RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 MKRN1Q9UHC7 482 aaKnown RBP13.5□□□□□ -0.25
TRIO-206ENST00000504606 SAP30BPQ9UHR5 308 aaKnown RBP13.5□□□□□ -0.25
TRIO-206ENST00000504606 TAF6LQ9Y6J9 622 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 LAMB1P07942 1786 aa13.5□□□□□ -0.25
TRIO-206ENST00000504606 CYP2D7A0A087X1C5 515 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 WNT10BO00744 389 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 MYO1BO43795 1136 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 POLR3DP05423 398 aaPredicted RBP13.49□□□□□ -0.25
TRIO-206ENST00000504606 LMOD1P29536 600 aaPredicted RBP13.49□□□□□ -0.25
TRIO-206ENST00000504606 CTDSPL2Q05D32 466 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 NFIAQ12857 509 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 KRT32Q14532 448 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 KIF4BQ2VIQ3 1234 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 SLC4A8Q2Y0W8 1093 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 ADCK5Q3MIX3 580 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 TSGA10IPQ3SY00 556 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 TBC1D10BQ4KMP7 808 aaPredicted RBP13.49□□□□□ -0.25
TRIO-206ENST00000504606 SBK1Q52WX2 424 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 SAMD7Q7Z3H4 446 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 IL17RAQ96F46 866 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 ZBED3Q96IU2 234 aaPredicted RBP13.49□□□□□ -0.25
TRIO-206ENST00000504606 JAKMIP1Q96N16 626 aaKnown RBP13.49□□□□□ -0.25
TRIO-206ENST00000504606 DDX4Q9NQI0 724 aaKnown RBP13.49□□□□□ -0.25
TRIO-206ENST00000504606 ZNF70Q9UC06 446 aaPredicted RBP13.49□□□□□ -0.25
TRIO-206ENST00000504606 DDX60LQ5H9U9 1706 aaKnown RBP13.49□□□□□ -0.25
TRIO-206ENST00000504606 MYH1P12882 1939 aa13.49□□□□□ -0.25
TRIO-206ENST00000504606 E7EWF7 191 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 EGFRP00533 1210 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 CYP2D6P10635 497 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 EPS15P42566 896 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 RABEP1Q15276 862 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 NBPF9Q3BBW0 867 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 STOX1Q6ZVD7 989 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 TBC1D10CQ8IV04 446 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 STK11IPQ8N1F8 1099 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 IDI2Q9BXS1 227 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 OSBPL5Q9H0X9 879 aaPredicted RBP13.48□□□□□ -0.25
TRIO-206ENST00000504606 VEZTQ9HBM0 779 aa13.48□□□□□ -0.25
TRIO-206ENST00000504606 GLTPD2A6NH11 291 aa13.47□□□□□ -0.25
TRIO-206ENST00000504606 PSMA5P28066 241 aa13.47□□□□□ -0.25
TRIO-206ENST00000504606 ANP32AP39687 249 aaKnown RBP13.47□□□□□ -0.25
TRIO-206ENST00000504606 TCP10Q12799 353 aa13.47□□□□□ -0.25
TRIO-206ENST00000504606 C12orf60Q5U649 245 aa13.47□□□□□ -0.25
TRIO-206ENST00000504606 NEK1Q96PY6 1258 aa13.47□□□□□ -0.25
TRIO-206ENST00000504606 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
TRIO-206ENST00000504606 FAM198AQ9UFP1 575 aa13.47□□□□□ -0.25
TRIO-206ENST00000504606 ANAPC4Q9UJX5 808 aa13.47□□□□□ -0.25
TRIO-206ENST00000504606 TCP10L2B9ZVM9 353 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 ENTPD3O75355 529 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.25
TRIO-206ENST00000504606 SLC3A2P08195 630 aaKnown RBP13.46□□□□□ -0.25
TRIO-206ENST00000504606 CASTP20810 708 aaKnown RBP13.46□□□□□ -0.25
TRIO-206ENST00000504606 EVX2Q03828 476 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 AKNAD1Q5T1N1 836 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 BLOC1S2Q6QNY1 142 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 RALYLQ86SE5 291 aaKnown RBP13.46□□□□□ -0.25
TRIO-206ENST00000504606 TTC6Q86TZ1 520 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 NCOA7Q8NI08 942 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 TRPM4Q8TD43 1214 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 STAG1Q8WVM7 1258 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 UPF3BQ9BZI7 483 aaKnown RBP13.46□□□□□ -0.25
TRIO-206ENST00000504606 TM6SF1Q9BZW5 370 aa13.46□□□□□ -0.25
TRIO-206ENST00000504606 RNF41Q9H4P4 317 aaPredicted RBP13.46□□□□□ -0.25
TRIO-206ENST00000504606 NEDD4P46934 1319 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 HLA-DOAP06340 250 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 CPA1P15085 419 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 PLCD1P51178 756 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 NEK4P51957 841 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 TRDNQ13061 729 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 MFSD6Q6ZSS7 791 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 ZSCAN29Q8IWY8 852 aaPredicted RBP13.45□□□□□ -0.26
TRIO-206ENST00000504606 ZFPM1Q8IX07 1006 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
TRIO-206ENST00000504606 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 INCENPQ9NQS7 918 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 ADARB2Q9NS39 739 aaKnown RBP13.45□□□□□ -0.26
TRIO-206ENST00000504606 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 HACL1Q9UJ83 578 aa13.45□□□□□ -0.26
TRIO-206ENST00000504606 ASTN2O75129 1339 aaPredicted RBP13.44□□□□□ -0.26
TRIO-206ENST00000504606 B4E1Z4 1266 aa13.44□□□□□ -0.26
TRIO-206ENST00000504606 TNNI2P48788 182 aa13.44□□□□□ -0.26
TRIO-206ENST00000504606 RRP12Q5JTH9 1297 aaKnown RBP13.44□□□□□ -0.26
TRIO-206ENST00000504606 FKBP1CQ5VVH2 108 aa13.44□□□□□ -0.26
TRIO-206ENST00000504606 RUFY3Q7L099 469 aa13.44□□□□□ -0.26
TRIO-206ENST00000504606 DYNLL2Q96FJ2 89 aa13.44□□□□□ -0.26
TRIO-206ENST00000504606 DHX36Q9H2U1 1008 aaKnown RBP13.44□□□□□ -0.26
TRIO-206ENST00000504606 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
TRIO-206ENST00000504606 CYP46A1Q9Y6A2 500 aa13.44□□□□□ -0.26
TRIO-206ENST00000504606 TACC3Q9Y6A5 838 aa13.44□□□□□ -0.26
TRIO-206ENST00000504606 CNTNAP1P78357 1384 aa13.44□□□□□ -0.26
TRIO-206ENST00000504606 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
TRIO-206ENST00000504606 COL2A1P02458 1487 aaPredicted RBP13.43□□□□□ -0.26
TRIO-206ENST00000504606 DDTLA6NHG4 134 aaPredicted RBP13.43□□□□□ -0.26
TRIO-206ENST00000504606 ST18O60284 1047 aa13.43□□□□□ -0.26
TRIO-206ENST00000504606 HMGB1P09429 215 aaKnown RBP13.43□□□□□ -0.26
TRIO-206ENST00000504606 PCP11498 1178 aaKnown RBP13.43□□□□□ -0.26
TRIO-206ENST00000504606 RPS6KB1P23443 525 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms