RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 CEP85Q6P2H3 762 aa9.92□□□□□ -0.82
RFC1-207ENST00000504554 XAGE2Q96GT9 111 aa9.92□□□□□ -0.82
RFC1-207ENST00000504554 HHIPL1Q96JK4 782 aa9.92□□□□□ -0.82
RFC1-207ENST00000504554 TDRD3Q9H7E2 651 aaKnown RBP9.92□□□□□ -0.82
RFC1-207ENST00000504554 SERPINA10Q9UK55 444 aa9.92□□□□□ -0.82
RFC1-207ENST00000504554 COG6Q9Y2V7 657 aa9.92□□□□□ -0.82
RFC1-207ENST00000504554 PRDX5P30044 214 aa9.91□□□□□ -0.82
RFC1-207ENST00000504554 RBM5P52756 815 aaKnown RBP eCLIP9.91□□□□□ -0.82
RFC1-207ENST00000504554 RASGRF1Q13972 1273 aa9.91□□□□□ -0.82
RFC1-207ENST00000504554 PRKG1Q13976 671 aa9.91□□□□□ -0.82
RFC1-207ENST00000504554 MVPQ14764 893 aaKnown RBP9.91□□□□□ -0.82
RFC1-207ENST00000504554 APOBEC3HQ6NTF7 200 aaKnown RBP9.91□□□□□ -0.82
RFC1-207ENST00000504554 APOBEC3FQ8IUX4 373 aaKnown RBP9.91□□□□□ -0.82
RFC1-207ENST00000504554 SIRT2Q8IXJ6 389 aa9.91□□□□□ -0.82
RFC1-207ENST00000504554 C2orf69Q8N8R5 385 aa9.91□□□□□ -0.82
RFC1-207ENST00000504554 DEFB129Q9H1M3 183 aa9.91□□□□□ -0.82
RFC1-207ENST00000504554 VEZTQ9HBM0 779 aa9.91□□□□□ -0.82
RFC1-207ENST00000504554 SLC24A3Q9HC58 644 aa9.91□□□□□ -0.82
RFC1-207ENST00000504554 ZNF70Q9UC06 446 aaPredicted RBP9.91□□□□□ -0.82
RFC1-207ENST00000504554 THSD7BQ9C0I4 1608 aa9.91□□□□□ -0.82
RFC1-207ENST00000504554 PPP1R3GB7ZBB8 358 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 ECE1P42892 770 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 CACNB3P54284 484 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 G3BP1Q13283 466 aaKnown RBP eCLIP9.9□□□□□ -0.822e-11■■■■□ 21.6
RFC1-207ENST00000504554 DIXDC1Q155Q3 683 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 NBPF12Q5TAG4 269 aaPredicted RBP9.9□□□□□ -0.82
RFC1-207ENST00000504554 RGMBQ6NW40 437 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 PI16Q6UXB8 463 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 ZNF384Q8TF68 577 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 TBC1D22AQ8WUA7 517 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 WNT2BQ93097 391 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 NEUROD6Q96NK8 337 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 ZBTB40Q9NUA8 1239 aa9.9□□□□□ -0.82
RFC1-207ENST00000504554 NOP58Q9Y2X3 529 aaKnown RBP9.9□□□□□ -0.82
RFC1-207ENST00000504554 GOLGA8CPA6NN73 597 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 TCP10L2B9ZVM9 353 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 SURF6O75683 361 aaKnown RBP9.89□□□□□ -0.83
RFC1-207ENST00000504554 SLC10A3P09131 477 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 COL9A1P20849 921 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 ZNF157P51786 506 aaPredicted RBP9.89□□□□□ -0.83
RFC1-207ENST00000504554 RASA3Q14644 834 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 RASAL3Q86YV0 1011 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 WDR66Q8TBY9 1149 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 YTHDC1Q96MU7 727 aaKnown RBP9.89□□□□□ -0.83
RFC1-207ENST00000504554 ZDHHC15Q96MV8 337 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 TEPSINQ96N21 525 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 DBNDD2Q9BQY9 259 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 MRIQ9BWK5 157 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 NBPF3Q9H094 633 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 TLR7Q9NYK1 1049 aaKnown RBP9.89□□□□□ -0.83
RFC1-207ENST00000504554 TSKSQ9UJT2 592 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 DENND2AQ9ULE3 1009 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 AKAP2Q9Y2D5 859 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 ARAP2Q8WZ64 1704 aa9.89□□□□□ -0.83
RFC1-207ENST00000504554 SALL1Q9NSC2 1324 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 HSPA8P11142 646 aaKnown RBP9.88□□□□□ -0.83
RFC1-207ENST00000504554 MAP2K2P36507 400 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 HDLBPQ00341 1268 aaKnown RBP9.88□□□□□ -0.83
RFC1-207ENST00000504554 KIF23Q02241 960 aaPredicted RBP9.88□□□□□ -0.83
RFC1-207ENST00000504554 PROX2Q3B8N5 592 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 TNNI3KQ59H18 835 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 LDLRAD1Q5T700 205 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 TBC1D9Q6ZT07 1266 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 TEKT1Q969V4 418 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 TMEM39BQ9GZU3 492 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 HMG20BQ9P0W2 317 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 EXOC6BQ9Y2D4 811 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 SUGT1Q9Y2Z0 365 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 DAGLAQ9Y4D2 1042 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 FPGT-TNNI3KV9GXZ4 949 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 PAPPA2Q9BXP8 1791 aa9.88□□□□□ -0.83
RFC1-207ENST00000504554 MYO1BO43795 1136 aa9.87□□□□□ -0.83
RFC1-207ENST00000504554 ARID4AP29374 1257 aaPredicted RBP9.87□□□□□ -0.83
RFC1-207ENST00000504554 MCAMP43121 646 aa9.87□□□□□ -0.83
RFC1-207ENST00000504554 FKBP1BP68106 108 aa9.87□□□□□ -0.83
RFC1-207ENST00000504554 MAP2K1Q02750 393 aaPredicted RBP9.87□□□□□ -0.83
RFC1-207ENST00000504554 TYW1BQ6NUM6 668 aa9.87□□□□□ -0.83
RFC1-207ENST00000504554 HHIPL2Q6UWX4 724 aa9.87□□□□□ -0.83
RFC1-207ENST00000504554 GPIHBP1Q8IV16 184 aa9.87□□□□□ -0.83
RFC1-207ENST00000504554 EAF2Q96CJ1 260 aaPredicted RBP9.87□□□□□ -0.83
RFC1-207ENST00000504554 CLMNQ96JQ2 1002 aa9.87□□□□□ -0.83
RFC1-207ENST00000504554 CCDC8Q9H0W5 538 aaPredicted RBP9.87□□□□□ -0.83
RFC1-207ENST00000504554 GPR108Q9NPR9 543 aa9.87□□□□□ -0.83
RFC1-207ENST00000504554 GNL3LQ9NVN8 582 aaKnown RBP9.87□□□□□ -0.83
RFC1-207ENST00000504554 DBNLQ9UJU6 430 aaKnown RBP9.87□□□□□ -0.83
RFC1-207ENST00000504554 DDX19BQ9UMR2 479 aa9.87□□□□□ -0.83
RFC1-207ENST00000504554 ANGEL1Q9UNK9 670 aaKnown RBP9.87□□□□□ -0.83
RFC1-207ENST00000504554 PPP2R3BQ9Y5P8 575 aa9.87□□□□□ -0.83
RFC1-207ENST00000504554 PDS5AQ29RF7 1337 aaKnown RBP9.86□□□□□ -0.83
RFC1-207ENST00000504554 USP2O75604 605 aaPredicted RBP9.86□□□□□ -0.83
RFC1-207ENST00000504554 LDHBP07195 334 aaKnown RBP9.86□□□□□ -0.83
RFC1-207ENST00000504554 LBX1P52954 281 aa9.86□□□□□ -0.83
RFC1-207ENST00000504554 NFIAQ12857 509 aa9.86□□□□□ -0.83
RFC1-207ENST00000504554 NOGQ13253 232 aa9.86□□□□□ -0.83
RFC1-207ENST00000504554 OS9Q13438 667 aaPredicted RBP9.86□□□□□ -0.83
RFC1-207ENST00000504554 TTLL12Q14166 644 aaPredicted RBP9.86□□□□□ -0.83
RFC1-207ENST00000504554 MAP3K11Q16584 847 aa9.86□□□□□ -0.83
RFC1-207ENST00000504554 CDC42EP5Q6NZY7 148 aa9.86□□□□□ -0.83
RFC1-207ENST00000504554 ZFPM1Q8IX07 1006 aa9.86□□□□□ -0.83
RFC1-207ENST00000504554 SPATA5Q8NB90 893 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms