RNA–Protein interactions for RNA: ENST00000502878.6

HMCES-204, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-204ENST00000502878 SERPINA10Q9UK55 444 aa28.04■■■□□ 2.08
HMCES-204ENST00000502878 SRCAPQ6ZRS2 3230 aa28.04■■■□□ 2.08
HMCES-204ENST00000502878 USP17L8P0C7I0 530 aa28.04■■■□□ 2.08
HMCES-204ENST00000502878 AKNAD1Q5T1N1 836 aa28.04■■■□□ 2.08
HMCES-204ENST00000502878 NKX2-3Q8TAU0 364 aa28.04■■■□□ 2.08
HMCES-204ENST00000502878 USP40Q9NVE5 1235 aa28.04■■■□□ 2.08
HMCES-204ENST00000502878 NEDD4P46934 1319 aa28.04■■■□□ 2.08
HMCES-204ENST00000502878 CYP2D6P10635 497 aa28.03■■■□□ 2.08
HMCES-204ENST00000502878 EXOSC10Q01780 885 aaKnown RBP28.03■■■□□ 2.08
HMCES-204ENST00000502878 CDC42EP5Q6NZY7 148 aa28.03■■■□□ 2.08
HMCES-204ENST00000502878 CHST3Q7LGC8 479 aa28.03■■■□□ 2.08
HMCES-204ENST00000502878 MB21D2Q8IYB1 491 aaPredicted RBP28.03■■■□□ 2.08
HMCES-204ENST00000502878 LRRC2Q9BYS8 371 aa28.03■■■□□ 2.08
HMCES-204ENST00000502878 YBX3P16989 372 aaKnown RBP eCLIP28.02■■■□□ 2.08
HMCES-204ENST00000502878 SLC4A8Q2Y0W8 1093 aa28.02■■■□□ 2.08
HMCES-204ENST00000502878 SBK1Q52WX2 424 aa28.02■■■□□ 2.08
HMCES-204ENST00000502878 RALYLQ86SE5 291 aaKnown RBP28.02■■■□□ 2.08
HMCES-204ENST00000502878 STAG1Q8WVM7 1258 aa28.02■■■□□ 2.08
HMCES-204ENST00000502878 TMX3Q96JJ7 454 aa28.02■■■□□ 2.08
HMCES-204ENST00000502878 ARPP21Q9UBL0 812 aaPredicted RBP28.02■■■□□ 2.08
HMCES-204ENST00000502878 TIAM2Q8IVF5 1701 aa28.02■■■□□ 2.08
HMCES-204ENST00000502878 TRDNQ13061 729 aa28.02■■■□□ 2.08
HMCES-204ENST00000502878 ALDH8A1Q9H2A2 487 aaPredicted RBP28.02■■■□□ 2.08
HMCES-204ENST00000502878 TOB2Q14106 344 aaPredicted RBP28.01■■■□□ 2.07
HMCES-204ENST00000502878 MFSD6Q6ZSS7 791 aa28.01■■■□□ 2.07
HMCES-204ENST00000502878 FLT1P17948 1338 aa28.01■■■□□ 2.07
HMCES-204ENST00000502878 B4E1Z4 1266 aa28■■■□□ 2.07
HMCES-204ENST00000502878 CFAP100Q494V2 611 aa28■■■□□ 2.07
HMCES-204ENST00000502878 Q6ZUG5 572 aa28■■■□□ 2.07
HMCES-204ENST00000502878 AGBL3Q8NEM8 1001 aa28■■■□□ 2.07
HMCES-204ENST00000502878 SAP30BPQ9UHR5 308 aaKnown RBP28■■■□□ 2.07
HMCES-204ENST00000502878 CDK5RAP2Q96SN8 1893 aa28■■■□□ 2.07
HMCES-204ENST00000502878 FZD9O00144 591 aa28■■■□□ 2.07
HMCES-204ENST00000502878 WDHD1O75717 1129 aaPredicted RBP28■■■□□ 2.07
HMCES-204ENST00000502878 TNIP1Q15025 636 aa28■■■□□ 2.07
HMCES-204ENST00000502878 LIMCH1Q9UPQ0 1083 aa28■■■□□ 2.07
HMCES-204ENST00000502878 MCM5P33992 734 aa27.99■■■□□ 2.07
HMCES-204ENST00000502878 ANTXR2P58335 489 aa27.99■■■□□ 2.07
HMCES-204ENST00000502878 PICALMQ13492 652 aa27.99■■■□□ 2.07
HMCES-204ENST00000502878 C12orf60Q5U649 245 aa27.99■■■□□ 2.07
HMCES-204ENST00000502878 FOXD4L1Q9NU39 408 aa27.99■■■□□ 2.07
HMCES-204ENST00000502878 RRP12Q5JTH9 1297 aaKnown RBP27.98■■■□□ 2.07
HMCES-204ENST00000502878 CYB5R4Q7L1T6 521 aa27.98■■■□□ 2.07
HMCES-204ENST00000502878 RNF41Q9H4P4 317 aaPredicted RBP27.98■■■□□ 2.07
HMCES-204ENST00000502878 DDX4Q9NQI0 724 aaKnown RBP27.98■■■□□ 2.07
HMCES-204ENST00000502878 TOMM22Q9NS69 142 aa27.98■■■□□ 2.07
HMCES-204ENST00000502878 HDAC9Q9UKV0 1011 aa27.98■■■□□ 2.07
HMCES-204ENST00000502878 PRC1O43663 620 aa27.97■■■□□ 2.07
HMCES-204ENST00000502878 LMNB1P20700 586 aa27.97■■■□□ 2.07
HMCES-204ENST00000502878 EIF6P56537 245 aaKnown RBP27.97■■■□□ 2.07
HMCES-204ENST00000502878 ANKRD1Q15327 319 aa27.97■■■□□ 2.07
HMCES-204ENST00000502878 OGFOD1Q8N543 542 aa27.97■■■□□ 2.07
HMCES-204ENST00000502878 CNNM2Q9H8M5 875 aa27.97■■■□□ 2.07
HMCES-204ENST00000502878 TPCN1Q9ULQ1 816 aa27.97■■■□□ 2.07
HMCES-204ENST00000502878 NAV1Q8NEY1 1877 aa27.97■■■□□ 2.07
HMCES-204ENST00000502878 LARGE1O95461 756 aa27.97■■■□□ 2.07
HMCES-204ENST00000502878 PRMT6Q96LA8 375 aaPredicted RBP27.97■■■□□ 2.07
HMCES-204ENST00000502878 KRT23Q9C075 422 aa27.97■■■□□ 2.07
HMCES-204ENST00000502878 UTRNP46939 3433 aa27.96■■■□□ 2.07
HMCES-204ENST00000502878 POLR3DP05423 398 aaPredicted RBP27.96■■■□□ 2.07
HMCES-204ENST00000502878 FGD1P98174 961 aa27.96■■■□□ 2.07
HMCES-204ENST00000502878 KDM4AO75164 1064 aa27.95■■■□□ 2.07
HMCES-204ENST00000502878 HSP90AA1P07900 732 aaKnown RBP27.95■■■□□ 2.07
HMCES-204ENST00000502878 PLCD1P51178 756 aa27.95■■■□□ 2.07
HMCES-204ENST00000502878 CACNB3P54284 484 aa27.95■■■□□ 2.07
HMCES-204ENST00000502878 NFIAQ12857 509 aa27.95■■■□□ 2.07
HMCES-204ENST00000502878 BRF1Q92994 677 aa27.95■■■□□ 2.07
HMCES-204ENST00000502878 SLKQ9H2G2 1235 aaPredicted RBP27.95■■■□□ 2.07
HMCES-204ENST00000502878 GPHNQ9NQX3 736 aaPredicted RBP27.95■■■□□ 2.07
HMCES-204ENST00000502878 LAMB1P07942 1786 aa27.95■■■□□ 2.07
HMCES-204ENST00000502878 ZNF541Q9H0D2 1346 aa27.95■■■□□ 2.06
HMCES-204ENST00000502878 SOCS7O14512 581 aa27.95■■■□□ 2.06
HMCES-204ENST00000502878 AMOTL1Q8IY63 956 aa27.95■■■□□ 2.06
HMCES-204ENST00000502878 AGXT2Q9BYV1 514 aa27.95■■■□□ 2.06
HMCES-204ENST00000502878 TDRD3Q9H7E2 651 aaKnown RBP27.95■■■□□ 2.06
HMCES-204ENST00000502878 ZSWIM5Q9P217 1185 aa27.95■■■□□ 2.06
HMCES-204ENST00000502878 PRDM1O75626 825 aa27.94■■■□□ 2.06
HMCES-204ENST00000502878 FGRP09769 529 aa27.94■■■□□ 2.06
HMCES-204ENST00000502878 GJA3Q9Y6H8 435 aa27.94■■■□□ 2.06
HMCES-204ENST00000502878 FOCADQ5VW36 1801 aa27.94■■■□□ 2.06
HMCES-204ENST00000502878 SHTN1A0MZ66 631 aa27.93■■■□□ 2.06
HMCES-204ENST00000502878 DYNLL2Q96FJ2 89 aa27.93■■■□□ 2.06
HMCES-204ENST00000502878 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.93■■■□□ 2.06
HMCES-204ENST00000502878 DDX60LQ5H9U9 1706 aaKnown RBP27.93■■■□□ 2.06
HMCES-204ENST00000502878 WDR19Q8NEZ3 1342 aa27.93■■■□□ 2.06
HMCES-204ENST00000502878 SPDYE2BA6NHP3 402 aa27.93■■■□□ 2.06
HMCES-204ENST00000502878 SLC3A2P08195 630 aaKnown RBP27.93■■■□□ 2.06
HMCES-204ENST00000502878 SPDYE6P0CI01 402 aa27.93■■■□□ 2.06
HMCES-204ENST00000502878 CUL4AQ13619 759 aa27.93■■■□□ 2.06
HMCES-204ENST00000502878 DLGAP5Q15398 846 aa27.93■■■□□ 2.06
HMCES-204ENST00000502878 ME3Q16798 604 aa27.93■■■□□ 2.06
HMCES-204ENST00000502878 ZSCAN31Q96LW9 406 aaPredicted RBP27.92■■■□□ 2.06
HMCES-204ENST00000502878 PCP11498 1178 aaKnown RBP27.91■■■□□ 2.06
HMCES-204ENST00000502878 RPS12P25398 132 aaKnown RBP27.91■■■□□ 2.06
HMCES-204ENST00000502878 FBXL16Q8N461 479 aa27.91■■■□□ 2.06
HMCES-204ENST00000502878 OSBPL5Q9H0X9 879 aaPredicted RBP27.91■■■□□ 2.06
HMCES-204ENST00000502878 GMPSP49915 693 aaPredicted RBP27.91■■■□□ 2.06
HMCES-204ENST00000502878 APOBRQ0VD83 1088 aa27.91■■■□□ 2.06
HMCES-204ENST00000502878 IDI2Q9BXS1 227 aa27.91■■■□□ 2.06
HMCES-204ENST00000502878 FAM198AQ9UFP1 575 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms